RNA–Protein interactions for RNA: ENST00000489935.1

KCNC4-207, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 1,955 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-207ENST00000489935 WDR63Q8IWG1 891 aa34.56■■■■□ 3.12
KCNC4-207ENST00000489935 NCBP3Q53F19 620 aaKnown RBP34.55■■■■□ 3.12
KCNC4-207ENST00000489935 PLEKHF1Q96S99 279 aa34.55■■■■□ 3.12
KCNC4-207ENST00000489935 CCDC61Q9Y6R9 512 aa34.54■■■■□ 3.12
KCNC4-207ENST00000489935 EDC4Q6P2E9 1401 aaKnown RBP34.54■■■■□ 3.12
KCNC4-207ENST00000489935 FBLN1P23142 703 aa34.54■■■■□ 3.12
KCNC4-207ENST00000489935 CDC42BPGQ6DT37 1551 aa34.53■■■■□ 3.12
KCNC4-207ENST00000489935 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.53■■■■□ 3.12
KCNC4-207ENST00000489935 SLC26A8Q96RN1 970 aa34.52■■■■□ 3.12
KCNC4-207ENST00000489935 EID1Q9Y6B2 187 aa34.52■■■■□ 3.12
KCNC4-207ENST00000489935 SLIT1O75093 1534 aa34.52■■■■□ 3.12
KCNC4-207ENST00000489935 ARHGAP23Q9P227 1491 aa34.51■■■■□ 3.12
KCNC4-207ENST00000489935 PRR36Q9H6K5 1346 aa34.51■■■■□ 3.12
KCNC4-207ENST00000489935 MAP2P11137 1827 aaKnown RBP34.51■■■■□ 3.11
KCNC4-207ENST00000489935 DIAPH1O60610 1272 aaKnown RBP34.51■■■■□ 3.11
KCNC4-207ENST00000489935 POLKQ9UBT6 870 aa34.51■■■■□ 3.11
KCNC4-207ENST00000489935 PTPRUQ92729 1446 aa34.5■■■■□ 3.11
KCNC4-207ENST00000489935 MON2Q7Z3U7 1717 aa34.49■■■■□ 3.11
KCNC4-207ENST00000489935 NME9Q86XW9 330 aa34.49■■■■□ 3.11
KCNC4-207ENST00000489935 AKAP12Q02952 1782 aa34.48■■■■□ 3.11
KCNC4-207ENST00000489935 ZRANB1Q9UGI0 708 aa34.47■■■■□ 3.11
KCNC4-207ENST00000489935 ITSN1Q15811 1721 aa34.44■■■■□ 3.1
KCNC4-207ENST00000489935 TMPOP42166 694 aaKnown RBP34.43■■■■□ 3.1
KCNC4-207ENST00000489935 FANCIQ9NVI1 1328 aa34.43■■■■□ 3.1
KCNC4-207ENST00000489935 PPM1GO15355 546 aaPredicted RBP34.43■■■■□ 3.1
KCNC4-207ENST00000489935 THEMISQ8N1K5 641 aaPredicted RBP34.42■■■■□ 3.1
KCNC4-207ENST00000489935 ZNF692Q9BU19 519 aaPredicted RBP34.4■■■■□ 3.1
KCNC4-207ENST00000489935 TBX22Q9Y458 520 aa34.4■■■■□ 3.1
KCNC4-207ENST00000489935 TRIM35Q9UPQ4 493 aa34.4■■■■□ 3.1
KCNC4-207ENST00000489935 MAPK8IP3Q9UPT6 1336 aa34.39■■■■□ 3.1
KCNC4-207ENST00000489935 AMOTL2Q9Y2J4 779 aa34.39■■■■□ 3.1
KCNC4-207ENST00000489935 EMILIN1Q9Y6C2 1016 aa34.38■■■■□ 3.09
KCNC4-207ENST00000489935 RARSP54136 660 aaKnown RBP34.37■■■■□ 3.09
KCNC4-207ENST00000489935 MYH16Q9H6N6 1097 aa34.37■■■■□ 3.09
KCNC4-207ENST00000489935 TOPAZ1Q8N9V7 1692 aa34.36■■■■□ 3.09
KCNC4-207ENST00000489935 COG3Q96JB2 828 aa34.35■■■■□ 3.09
KCNC4-207ENST00000489935 AATKQ6ZMQ8 1374 aa34.35■■■■□ 3.09
KCNC4-207ENST00000489935 NUTM2FA1L443 756 aa34.34■■■■□ 3.09
KCNC4-207ENST00000489935 FCHSD2O94868 740 aa34.34■■■■□ 3.09
KCNC4-207ENST00000489935 KDM2BQ8NHM5 1336 aa34.34■■■■□ 3.09
KCNC4-207ENST00000489935 PNNQ9H307 717 aaKnown RBP34.34■■■■□ 3.09
KCNC4-207ENST00000489935 TCERG1O14776 1098 aaKnown RBP34.32■■■■□ 3.09
KCNC4-207ENST00000489935 PLEKHG3A1L390 1219 aa34.32■■■■□ 3.08
KCNC4-207ENST00000489935 PDE3AQ14432 1141 aa34.32■■■■□ 3.08
KCNC4-207ENST00000489935 RSPH6AQ9H0K4 717 aa34.32■■■■□ 3.08
KCNC4-207ENST00000489935 LRRC7Q96NW7 1537 aa34.32■■■■□ 3.08
KCNC4-207ENST00000489935 ACEP12821 1306 aa34.32■■■■□ 3.08
KCNC4-207ENST00000489935 RIPK4P57078 832 aa34.31■■■■□ 3.08
KCNC4-207ENST00000489935 MSH5O43196 834 aa34.29■■■■□ 3.08
KCNC4-207ENST00000489935 IL13P35225 146 aa34.29■■■■□ 3.08
KCNC4-207ENST00000489935 CDK12Q9NYV4 1490 aaPredicted RBP34.29■■■■□ 3.08
KCNC4-207ENST00000489935 DIP2AQ14689 1571 aa34.28■■■■□ 3.08
KCNC4-207ENST00000489935 NRKQ7Z2Y5 1582 aa34.28■■■■□ 3.08
KCNC4-207ENST00000489935 PTCH1Q13635 1447 aa34.28■■■■□ 3.08
KCNC4-207ENST00000489935 PRKAR2BP31323 418 aa34.27■■■■□ 3.08
KCNC4-207ENST00000489935 TSR2Q969E8 191 aaKnown RBP34.27■■■■□ 3.08
KCNC4-207ENST00000489935 TTC21BQ7Z4L5 1316 aa34.27■■■■□ 3.08
KCNC4-207ENST00000489935 RRS1Q15050 365 aaKnown RBP34.27■■■■□ 3.08
KCNC4-207ENST00000489935 SKAP1Q86WV1 359 aa34.27■■■■□ 3.08
KCNC4-207ENST00000489935 FRAT1Q92837 279 aaPredicted RBP34.26■■■■□ 3.08
KCNC4-207ENST00000489935 CANXP27824 592 aaKnown RBP34.25■■■■□ 3.07
KCNC4-207ENST00000489935 CENPQQ7L2Z9 268 aaPredicted RBP34.25■■■■□ 3.07
KCNC4-207ENST00000489935 PANK1Q8TE04 598 aa34.25■■■■□ 3.07
KCNC4-207ENST00000489935 RIMS1Q86UR5 1692 aaKnown RBP34.24■■■■□ 3.07
KCNC4-207ENST00000489935 CEP170BQ9Y4F5 1589 aaPredicted RBP34.24■■■■□ 3.07
KCNC4-207ENST00000489935 IL16Q14005 1332 aa34.23■■■■□ 3.07
KCNC4-207ENST00000489935 HMOX1P09601 288 aa34.23■■■■□ 3.07
KCNC4-207ENST00000489935 BCL2L13Q9BXK5 485 aa34.23■■■■□ 3.07
KCNC4-207ENST00000489935 USP6P35125 1406 aa34.22■■■■□ 3.07
KCNC4-207ENST00000489935 PHACTR3Q96KR7 559 aa34.22■■■■□ 3.07
KCNC4-207ENST00000489935 XRN1Q8IZH2 1706 aaKnown RBP34.21■■■■□ 3.07
KCNC4-207ENST00000489935 MS4A1P11836 297 aa34.2■■■■□ 3.07
KCNC4-207ENST00000489935 EXOSC9Q06265 439 aaKnown RBP34.2■■■■□ 3.07
KCNC4-207ENST00000489935 COG6Q9Y2V7 657 aa34.2■■■■□ 3.07
KCNC4-207ENST00000489935 RGPD8O14715 1765 aaPredicted RBP34.19■■■■□ 3.06
KCNC4-207ENST00000489935 TNNQ9UQP3 1299 aa34.18■■■■□ 3.06
KCNC4-207ENST00000489935 CT47B1P0C2W7 299 aaPredicted RBP34.18■■■■□ 3.06
KCNC4-207ENST00000489935 OVOS2A0A0J9YW53 1432 aa34.16■■■■□ 3.06
KCNC4-207ENST00000489935 OVOS2Q6IE36 1432 aa34.16■■■■□ 3.06
KCNC4-207ENST00000489935 SSH2Q76I76 1423 aa34.16■■■■□ 3.06
KCNC4-207ENST00000489935 NEFMP07197 916 aa34.15■■■■□ 3.06
KCNC4-207ENST00000489935 PMFBP1Q8TBY8 1022 aa34.15■■■■□ 3.06
KCNC4-207ENST00000489935 RLBP1P12271 317 aa34.14■■■■□ 3.06
KCNC4-207ENST00000489935 NFE2L2Q16236 605 aa34.14■■■■□ 3.06
KCNC4-207ENST00000489935 KCNA6P17658 529 aa34.14■■■■□ 3.06
KCNC4-207ENST00000489935 PDE4AP27815 886 aa34.14■■■■□ 3.06
KCNC4-207ENST00000489935 NALCNQ8IZF0 1738 aa34.11■■■■□ 3.05
KCNC4-207ENST00000489935 CLUAP1Q96AJ1 413 aa34.11■■■■□ 3.05
KCNC4-207ENST00000489935 IGHDP01880 384 aa34.09■■■■□ 3.05
KCNC4-207ENST00000489935 BACH2Q9BYV9 841 aa34.09■■■■□ 3.05
KCNC4-207ENST00000489935 PIK3R4Q99570 1358 aa34.09■■■■□ 3.05
KCNC4-207ENST00000489935 USP31Q70CQ4 1352 aa34.07■■■■□ 3.04
KCNC4-207ENST00000489935 SSH1Q8WYL5 1049 aa34.06■■■■□ 3.04
KCNC4-207ENST00000489935 ADAMTSL3P82987 1691 aa34.06■■■■□ 3.04
KCNC4-207ENST00000489935 DLG5Q8TDM6 1919 aa34.06■■■■□ 3.04
KCNC4-207ENST00000489935 EIF4A2Q14240 407 aaKnown RBP34.05■■■■□ 3.04
KCNC4-207ENST00000489935 PEAK1Q9H792 1746 aa34.05■■■■□ 3.04
KCNC4-207ENST00000489935 TTC21AQ8NDW8 1320 aa34.05■■■■□ 3.04
KCNC4-207ENST00000489935 NGDNQ8NEJ9 315 aaKnown RBP34.05■■■■□ 3.04
KCNC4-207ENST00000489935 SMC4Q9NTJ3 1288 aa34.05■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms