RNA–Protein interactions for RNA: ENST00000489234.1

ZSWIM8-211, Transcript of zinc finger SWIM-type containing 8, humanhuman

TSL 5

Gene ZSWIM8, Length 681 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM8-211ENST00000489234 NPHP3Q7Z494 1330 aa12.52□□□□□ -0.41
ZSWIM8-211ENST00000489234 TNS3Q68CZ2 1445 aa12.52□□□□□ -0.41
ZSWIM8-211ENST00000489234 EDC4Q6P2E9 1401 aaKnown RBP12.52□□□□□ -0.41
ZSWIM8-211ENST00000489234 POLR3GLQ9BT43 218 aa12.51□□□□□ -0.41
ZSWIM8-211ENST00000489234 NSD3Q9BZ95 1437 aa12.51□□□□□ -0.41
ZSWIM8-211ENST00000489234 ANKRD26Q9UPS8 1709 aa12.51□□□□□ -0.41
ZSWIM8-211ENST00000489234 TMC1Q8TDI8 760 aa12.5□□□□□ -0.41
ZSWIM8-211ENST00000489234 CARD14Q9BXL6 1004 aa12.5□□□□□ -0.41
ZSWIM8-211ENST00000489234 SBNO1A3KN83 1393 aa12.5□□□□□ -0.41
ZSWIM8-211ENST00000489234 KTN1Q86UP2 1357 aaKnown RBP12.5□□□□□ -0.41
ZSWIM8-211ENST00000489234 JCADQ9P266 1359 aa12.5□□□□□ -0.41
ZSWIM8-211ENST00000489234 OVOS2A0A0J9YW53 1432 aa12.49□□□□□ -0.41
ZSWIM8-211ENST00000489234 OVOS2Q6IE36 1432 aa12.49□□□□□ -0.41
ZSWIM8-211ENST00000489234 NGDNQ8NEJ9 315 aaKnown RBP12.49□□□□□ -0.41
ZSWIM8-211ENST00000489234 SLIT3O75094 1523 aa12.48□□□□□ -0.41
ZSWIM8-211ENST00000489234 PNPLA6Q8IY17 1366 aa12.48□□□□□ -0.41
ZSWIM8-211ENST00000489234 SPATA31A3Q5VYP0 1347 aa12.48□□□□□ -0.41
ZSWIM8-211ENST00000489234 ZNF316A6NFI3 1004 aaPredicted RBP12.48□□□□□ -0.41
ZSWIM8-211ENST00000489234 LRRC59Q96AG4 307 aaKnown RBP12.48□□□□□ -0.41
ZSWIM8-211ENST00000489234 BRD4O60885 1362 aaPredicted RBP12.47□□□□□ -0.41
ZSWIM8-211ENST00000489234 TTC21BQ7Z4L5 1316 aa12.47□□□□□ -0.41
ZSWIM8-211ENST00000489234 KRT28Q7Z3Y7 464 aa12.47□□□□□ -0.41
ZSWIM8-211ENST00000489234 PANK3Q9H999 370 aa12.46□□□□□ -0.41
ZSWIM8-211ENST00000489234 TERF2IPQ9NYB0 399 aa12.46□□□□□ -0.41
ZSWIM8-211ENST00000489234 NFAT5O94916 1531 aa12.46□□□□□ -0.42
ZSWIM8-211ENST00000489234 LRP6O75581 1613 aa12.45□□□□□ -0.42
ZSWIM8-211ENST00000489234 HDGFL2Q7Z4V5 671 aaPredicted RBP12.45□□□□□ -0.42
ZSWIM8-211ENST00000489234 USP31Q70CQ4 1352 aa12.44□□□□□ -0.42
ZSWIM8-211ENST00000489234 USP19O94966 1318 aa12.44□□□□□ -0.42
ZSWIM8-211ENST00000489234 SPATA31A6Q5VVP1 1343 aa12.44□□□□□ -0.42
ZSWIM8-211ENST00000489234 PER1O15534 1290 aaPredicted RBP12.44□□□□□ -0.42
ZSWIM8-211ENST00000489234 PSME1Q06323 249 aa12.44□□□□□ -0.42
ZSWIM8-211ENST00000489234 NME9Q86XW9 330 aa12.44□□□□□ -0.42
ZSWIM8-211ENST00000489234 ZRANB1Q9UGI0 708 aa12.44□□□□□ -0.42
ZSWIM8-211ENST00000489234 TTC21AQ8NDW8 1320 aa12.43□□□□□ -0.42
ZSWIM8-211ENST00000489234 ZNF692Q9BU19 519 aaPredicted RBP12.43□□□□□ -0.42
ZSWIM8-211ENST00000489234 ARHGEF10O15013 1369 aa12.43□□□□□ -0.42
ZSWIM8-211ENST00000489234 AMER1Q5JTC6 1135 aaPredicted RBP12.42□□□□□ -0.42
ZSWIM8-211ENST00000489234 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.42□□□□□ -0.42
ZSWIM8-211ENST00000489234 PEAK1Q9H792 1746 aa12.4□□□□□ -0.42
ZSWIM8-211ENST00000489234 FYB1O15117 783 aa12.4□□□□□ -0.42
ZSWIM8-211ENST00000489234 DDX10Q13206 875 aaKnown RBP12.4□□□□□ -0.42
ZSWIM8-211ENST00000489234 NUTM2GQ5VZR2 741 aa12.4□□□□□ -0.42
ZSWIM8-211ENST00000489234 LMO7Q8WWI1 1683 aa12.4□□□□□ -0.42
ZSWIM8-211ENST00000489234 NPC1L1Q9UHC9 1359 aa12.4□□□□□ -0.42
ZSWIM8-211ENST00000489234 LTN1O94822 1766 aa12.39□□□□□ -0.43
ZSWIM8-211ENST00000489234 PAK3O75914 559 aaPredicted RBP12.39□□□□□ -0.43
ZSWIM8-211ENST00000489234 NSD2O96028 1365 aa12.39□□□□□ -0.43
ZSWIM8-211ENST00000489234 PLCH1Q4KWH8 1693 aa12.38□□□□□ -0.43
ZSWIM8-211ENST00000489234 CGNL1Q0VF96 1302 aa12.38□□□□□ -0.43
ZSWIM8-211ENST00000489234 COL18A1P39060 1754 aa12.38□□□□□ -0.43
ZSWIM8-211ENST00000489234 NUTM2BA6NNL0 878 aaPredicted RBP12.38□□□□□ -0.43
ZSWIM8-211ENST00000489234 NUTM2EB1AL46 878 aaPredicted RBP12.38□□□□□ -0.43
ZSWIM8-211ENST00000489234 NUTM2AQ8IVF1 878 aaPredicted RBP12.38□□□□□ -0.43
ZSWIM8-211ENST00000489234 GGNBP2Q9H3C7 697 aa12.38□□□□□ -0.43
ZSWIM8-211ENST00000489234 NRAPQ86VF7 1730 aa12.37□□□□□ -0.43
ZSWIM8-211ENST00000489234 ABTB2Q8N961 1025 aa12.37□□□□□ -0.43
ZSWIM8-211ENST00000489234 CABLES1Q8TDN4 633 aa12.37□□□□□ -0.43
ZSWIM8-211ENST00000489234 SMG6Q86US8 1419 aaKnown RBP12.37□□□□□ -0.43
ZSWIM8-211ENST00000489234 LMOD2Q6P5Q4 547 aa12.36□□□□□ -0.43
ZSWIM8-211ENST00000489234 PARD3Q8TEW0 1356 aa12.35□□□□□ -0.43
ZSWIM8-211ENST00000489234 NLRP6P59044 892 aa12.35□□□□□ -0.43
ZSWIM8-211ENST00000489234 KNSTRNQ9Y448 316 aa12.35□□□□□ -0.43
ZSWIM8-211ENST00000489234 ABCC6O95255 1503 aa12.35□□□□□ -0.43
ZSWIM8-211ENST00000489234 COL14A1Q05707 1796 aaKnown RBP12.35□□□□□ -0.43
ZSWIM8-211ENST00000489234 CPDO75976 1380 aa12.34□□□□□ -0.43
ZSWIM8-211ENST00000489234 ADAMTS2O95450 1211 aa12.34□□□□□ -0.43
ZSWIM8-211ENST00000489234 RGS17Q9UGC6 210 aaPredicted RBP12.34□□□□□ -0.43
ZSWIM8-211ENST00000489234 PLEKHG5O94827 1062 aa12.33□□□□□ -0.44
ZSWIM8-211ENST00000489234 FBLN1P23142 703 aa12.33□□□□□ -0.44
ZSWIM8-211ENST00000489234 CC2D1BQ5T0F9 858 aaKnown RBP12.33□□□□□ -0.44
ZSWIM8-211ENST00000489234 MEX3CQ5U5Q3 659 aaKnown RBP12.33□□□□□ -0.44
ZSWIM8-211ENST00000489234 NLRP13Q86W25 1043 aa12.33□□□□□ -0.44
ZSWIM8-211ENST00000489234 NWD2Q9ULI1 1742 aa12.33□□□□□ -0.44
ZSWIM8-211ENST00000489234 RGPD5Q99666 1765 aa12.33□□□□□ -0.44
ZSWIM8-211ENST00000489234 AATKQ6ZMQ8 1374 aa12.32□□□□□ -0.44
ZSWIM8-211ENST00000489234 KIAA0232Q92628 1395 aa12.32□□□□□ -0.44
ZSWIM8-211ENST00000489234 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.32□□□□□ -0.44
ZSWIM8-211ENST00000489234 GCP02774 474 aa12.32□□□□□ -0.44
ZSWIM8-211ENST00000489234 COG3Q96JB2 828 aa12.32□□□□□ -0.44
ZSWIM8-211ENST00000489234 PHF23Q9BUL5 403 aaPredicted RBP12.32□□□□□ -0.44
ZSWIM8-211ENST00000489234 COL3A1P02461 1466 aaPredicted RBP12.32□□□□□ -0.44
ZSWIM8-211ENST00000489234 CAMTA1Q9Y6Y1 1673 aa12.32□□□□□ -0.44
ZSWIM8-211ENST00000489234 SLIT2O94813 1529 aa12.32□□□□□ -0.44
ZSWIM8-211ENST00000489234 C8orf37Q96NL8 207 aa12.31□□□□□ -0.44
ZSWIM8-211ENST00000489234 MAP2P11137 1827 aaKnown RBP12.31□□□□□ -0.44
ZSWIM8-211ENST00000489234 CDK12Q9NYV4 1490 aaPredicted RBP12.31□□□□□ -0.44
ZSWIM8-211ENST00000489234 SOX12O15370 315 aa12.3□□□□□ -0.44
ZSWIM8-211ENST00000489234 ARHGEF25Q86VW2 580 aa12.3□□□□□ -0.44
ZSWIM8-211ENST00000489234 AFF2P51816 1311 aa12.3□□□□□ -0.44
ZSWIM8-211ENST00000489234 MAP3K19Q56UN5 1328 aa12.3□□□□□ -0.44
ZSWIM8-211ENST00000489234 HAP1P54257 671 aaPredicted RBP12.29□□□□□ -0.44
ZSWIM8-211ENST00000489234 RRS1Q15050 365 aaKnown RBP12.29□□□□□ -0.44
ZSWIM8-211ENST00000489234 FNBP4Q8N3X1 1017 aaPredicted RBP12.29□□□□□ -0.44
ZSWIM8-211ENST00000489234 RTL1A6NKG5 1358 aa12.29□□□□□ -0.44
ZSWIM8-211ENST00000489234 RGPD1P0DJD0 1748 aa12.28□□□□□ -0.44
ZSWIM8-211ENST00000489234 COL5A2P05997 1499 aaPredicted RBP12.28□□□□□ -0.44
ZSWIM8-211ENST00000489234 ZC3H6P61129 1189 aaKnown RBP12.28□□□□□ -0.44
ZSWIM8-211ENST00000489234 CNGB1Q14028 1251 aaPredicted RBP12.28□□□□□ -0.44
ZSWIM8-211ENST00000489234 NGLY1Q96IV0 654 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms