RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 CGNL1Q0VF96 1302 aa11.91□□□□□ -0.5
EXOSC1-211ENST00000489158 CARD14Q9BXL6 1004 aa11.91□□□□□ -0.5
EXOSC1-211ENST00000489158 STRCP1A6NGW2 1772 aa11.9□□□□□ -0.5
EXOSC1-211ENST00000489158 NUTM2FA1L443 756 aa11.9□□□□□ -0.5
EXOSC1-211ENST00000489158 CABP1Q9NZU7 370 aa11.9□□□□□ -0.5
EXOSC1-211ENST00000489158 PRR36Q9H6K5 1346 aa11.89□□□□□ -0.51
EXOSC1-211ENST00000489158 NLRP13Q86W25 1043 aa11.89□□□□□ -0.51
EXOSC1-211ENST00000489158 DMRT2Q9Y5R5 561 aa11.89□□□□□ -0.51
EXOSC1-211ENST00000489158 EDC4Q6P2E9 1401 aaKnown RBP11.89□□□□□ -0.51
EXOSC1-211ENST00000489158 PLEKHG3A1L390 1219 aa11.89□□□□□ -0.51
EXOSC1-211ENST00000489158 ZNF692Q9BU19 519 aaPredicted RBP11.89□□□□□ -0.51
EXOSC1-211ENST00000489158 NRKQ7Z2Y5 1582 aa11.89□□□□□ -0.51
EXOSC1-211ENST00000489158 DCCP43146 1447 aa11.88□□□□□ -0.51
EXOSC1-211ENST00000489158 RGPD8O14715 1765 aaPredicted RBP11.88□□□□□ -0.51
EXOSC1-211ENST00000489158 PROSER2Q86WR7 435 aaPredicted RBP11.87□□□□□ -0.51
EXOSC1-211ENST00000489158 PNISRQ8TF01 805 aaKnown RBP11.87□□□□□ -0.51
EXOSC1-211ENST00000489158 RBM33Q96EV2 1170 aaKnown RBP11.87□□□□□ -0.51
EXOSC1-211ENST00000489158 ILDR1Q86SU0 546 aaPredicted RBP11.86□□□□□ -0.51
EXOSC1-211ENST00000489158 C14orf37Q86TY3 774 aa11.86□□□□□ -0.51
EXOSC1-211ENST00000489158 POLR3AO14802 1390 aaPredicted RBP11.86□□□□□ -0.51
EXOSC1-211ENST00000489158 NPM2Q86SE8 214 aaKnown RBP11.85□□□□□ -0.51
EXOSC1-211ENST00000489158 KIF1AQ12756 1690 aa11.85□□□□□ -0.51
EXOSC1-211ENST00000489158 PPP2R1AP30153 589 aa11.84□□□□□ -0.51
EXOSC1-211ENST00000489158 MORC1Q86VD1 984 aa11.84□□□□□ -0.51
EXOSC1-211ENST00000489158 XIRP1Q702N8 1843 aaKnown RBP11.84□□□□□ -0.51
EXOSC1-211ENST00000489158 USP6P35125 1406 aa11.84□□□□□ -0.51
EXOSC1-211ENST00000489158 TMEM94Q12767 1356 aa11.83□□□□□ -0.52
EXOSC1-211ENST00000489158 C19orf44Q9H6X5 657 aa11.83□□□□□ -0.52
EXOSC1-211ENST00000489158 ACEP12821 1306 aa11.83□□□□□ -0.52
EXOSC1-211ENST00000489158 TNNT2P45379 298 aaPredicted RBP11.83□□□□□ -0.52
EXOSC1-211ENST00000489158 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.83□□□□□ -0.52
EXOSC1-211ENST00000489158 EXOC6Q8TAG9 804 aa11.83□□□□□ -0.52
EXOSC1-211ENST00000489158 INSRP06213 1382 aa11.82□□□□□ -0.52
EXOSC1-211ENST00000489158 USP54Q70EL1 1684 aa11.82□□□□□ -0.52
EXOSC1-211ENST00000489158 LRRC7Q96NW7 1537 aa11.82□□□□□ -0.52
EXOSC1-211ENST00000489158 FYB1O15117 783 aa11.81□□□□□ -0.52
EXOSC1-211ENST00000489158 RRP1P56182 461 aaKnown RBP11.81□□□□□ -0.52
EXOSC1-211ENST00000489158 GGNBP2Q9H3C7 697 aa11.81□□□□□ -0.52
EXOSC1-211ENST00000489158 TTC21AQ8NDW8 1320 aa11.81□□□□□ -0.52
EXOSC1-211ENST00000489158 SSH2Q76I76 1423 aa11.81□□□□□ -0.52
EXOSC1-211ENST00000489158 TCERG1O14776 1098 aaKnown RBP11.81□□□□□ -0.52
EXOSC1-211ENST00000489158 PMFBP1Q8TBY8 1022 aa11.81□□□□□ -0.52
EXOSC1-211ENST00000489158 MSH6P52701 1360 aa11.81□□□□□ -0.52
EXOSC1-211ENST00000489158 ANO8Q9HCE9 1232 aaPredicted RBP11.8□□□□□ -0.52
EXOSC1-211ENST00000489158 PDE4AP27815 886 aa11.8□□□□□ -0.52
EXOSC1-211ENST00000489158 NGDNQ8NEJ9 315 aaKnown RBP11.8□□□□□ -0.52
EXOSC1-211ENST00000489158 IL27Q8NEV9 243 aa11.8□□□□□ -0.52
EXOSC1-211ENST00000489158 PHF8Q9UPP1 1060 aa11.8□□□□□ -0.52
EXOSC1-211ENST00000489158 LAS1LQ9Y4W2 734 aaKnown RBP11.8□□□□□ -0.52
EXOSC1-211ENST00000489158 PRKCSHP14314 528 aaPredicted RBP11.79□□□□□ -0.52
EXOSC1-211ENST00000489158 CADPS2Q86UW7 1296 aa11.79□□□□□ -0.52
EXOSC1-211ENST00000489158 TTC21BQ7Z4L5 1316 aa11.79□□□□□ -0.52
EXOSC1-211ENST00000489158 MST1RQ04912 1400 aa11.79□□□□□ -0.52
EXOSC1-211ENST00000489158 C1orf167Q5SNV9 1468 aa11.79□□□□□ -0.52
EXOSC1-211ENST00000489158 ATF3P18847 181 aa11.78□□□□□ -0.52
EXOSC1-211ENST00000489158 NEFMP07197 916 aa11.78□□□□□ -0.52
EXOSC1-211ENST00000489158 OVOS2A0A0J9YW53 1432 aa11.77□□□□□ -0.52
EXOSC1-211ENST00000489158 OVOS2Q6IE36 1432 aa11.77□□□□□ -0.52
EXOSC1-211ENST00000489158 AATKQ6ZMQ8 1374 aa11.77□□□□□ -0.52
EXOSC1-211ENST00000489158 USP31Q70CQ4 1352 aa11.77□□□□□ -0.52
EXOSC1-211ENST00000489158 ZNF335Q9H4Z2 1342 aaPredicted RBP11.77□□□□□ -0.52
EXOSC1-211ENST00000489158 RCAN3Q9UKA8 241 aa11.77□□□□□ -0.52
EXOSC1-211ENST00000489158 COG3Q96JB2 828 aa11.77□□□□□ -0.53
EXOSC1-211ENST00000489158 BACH2Q9BYV9 841 aa11.77□□□□□ -0.53
EXOSC1-211ENST00000489158 SALL2Q9Y467 1007 aaPredicted RBP11.77□□□□□ -0.53
EXOSC1-211ENST00000489158 PIK3C2AO00443 1686 aa11.77□□□□□ -0.53
EXOSC1-211ENST00000489158 WDR43Q15061 677 aaKnown RBP eCLIP11.76□□□□□ -0.53
EXOSC1-211ENST00000489158 NME9Q86XW9 330 aa11.76□□□□□ -0.53
EXOSC1-211ENST00000489158 CFAP53Q96M91 514 aa11.76□□□□□ -0.53
EXOSC1-211ENST00000489158 ESCO1Q5FWF5 840 aa11.75□□□□□ -0.53
EXOSC1-211ENST00000489158 SHPRHQ149N8 1683 aa11.75□□□□□ -0.53
EXOSC1-211ENST00000489158 RTN4Q9NQC3 1192 aaKnown RBP11.75□□□□□ -0.53
EXOSC1-211ENST00000489158 MAP2P11137 1827 aaKnown RBP11.75□□□□□ -0.53
EXOSC1-211ENST00000489158 TRPM3Q9HCF6 1732 aaPredicted RBP11.74□□□□□ -0.53
EXOSC1-211ENST00000489158 MS4A1P11836 297 aa11.74□□□□□ -0.53
EXOSC1-211ENST00000489158 MTHFSP49914 203 aa11.74□□□□□ -0.53
EXOSC1-211ENST00000489158 USP35Q9P2H5 1018 aa11.74□□□□□ -0.53
EXOSC1-211ENST00000489158 BLMP54132 1417 aaPredicted RBP11.74□□□□□ -0.53
EXOSC1-211ENST00000489158 MARF1Q9Y4F3 1742 aaKnown RBP11.73□□□□□ -0.53
EXOSC1-211ENST00000489158 CDK12Q9NYV4 1490 aaPredicted RBP11.73□□□□□ -0.53
EXOSC1-211ENST00000489158 LTBP4Q8N2S1 1624 aa11.73□□□□□ -0.53
EXOSC1-211ENST00000489158 PPM1GO15355 546 aaPredicted RBP11.72□□□□□ -0.53
EXOSC1-211ENST00000489158 ZRANB1Q9UGI0 708 aa11.72□□□□□ -0.53
EXOSC1-211ENST00000489158 COL3A1P02461 1466 aaPredicted RBP11.72□□□□□ -0.53
EXOSC1-211ENST00000489158 PNPLA6Q8IY17 1366 aa11.72□□□□□ -0.53
EXOSC1-211ENST00000489158 PSME1Q06323 249 aa11.71□□□□□ -0.53
EXOSC1-211ENST00000489158 ORAI2Q96SN7 254 aa11.71□□□□□ -0.53
EXOSC1-211ENST00000489158 PDE3BQ13370 1112 aa11.71□□□□□ -0.54
EXOSC1-211ENST00000489158 ADAMTS8Q9UP79 889 aa11.71□□□□□ -0.54
EXOSC1-211ENST00000489158 ALS2Q96Q42 1657 aa11.71□□□□□ -0.54
EXOSC1-211ENST00000489158 KIF24Q5T7B8 1368 aa11.7□□□□□ -0.54
EXOSC1-211ENST00000489158 FBLN1P23142 703 aa11.7□□□□□ -0.54
EXOSC1-211ENST00000489158 CDCA7LQ96GN5 454 aa11.7□□□□□ -0.54
EXOSC1-211ENST00000489158 NPHP3Q7Z494 1330 aa11.7□□□□□ -0.54
EXOSC1-211ENST00000489158 SBNO1A3KN83 1393 aa11.69□□□□□ -0.54
EXOSC1-211ENST00000489158 PLIN1O60240 522 aa11.69□□□□□ -0.54
EXOSC1-211ENST00000489158 SKAP1Q86WV1 359 aa11.69□□□□□ -0.54
EXOSC1-211ENST00000489158 FBXO41Q8TF61 875 aa11.69□□□□□ -0.54
EXOSC1-211ENST00000489158 POLKQ9UBT6 870 aa11.69□□□□□ -0.54
EXOSC1-211ENST00000489158 SOX12O15370 315 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms