RNA–Protein interactions for RNA: ENST00000488965.1

SCP2-212, Transcript of sterol carrier protein 2, humanhuman

TSL 1 (best) BASIC

Gene SCP2, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-212ENST00000488965 SLC4A3P48751 1232 aa8.8□□□□□ -1
SCP2-212ENST00000488965 SKAP1Q86WV1 359 aa8.8□□□□□ -1
SCP2-212ENST00000488965 EID1Q9Y6B2 187 aa8.8□□□□□ -1
SCP2-212ENST00000488965 CARD14Q9BXL6 1004 aa8.8□□□□□ -1
SCP2-212ENST00000488965 IQSEC2Q5JU85 1478 aa8.8□□□□□ -1
SCP2-212ENST00000488965 TXNDC2Q86VQ3 553 aa8.8□□□□□ -1
SCP2-212ENST00000488965 NSD2O96028 1365 aa8.8□□□□□ -1
SCP2-212ENST00000488965 ZNF142P52746 1687 aaPredicted RBP8.8□□□□□ -1
SCP2-212ENST00000488965 SLIT1O75093 1534 aa8.79□□□□□ -1
SCP2-212ENST00000488965 CDC42BPGQ6DT37 1551 aa8.79□□□□□ -1
SCP2-212ENST00000488965 NUTM2GQ5VZR2 741 aa8.79□□□□□ -1
SCP2-212ENST00000488965 POLR3AO14802 1390 aaPredicted RBP8.79□□□□□ -1
SCP2-212ENST00000488965 ITSN1Q15811 1721 aa8.79□□□□□ -1
SCP2-212ENST00000488965 ANKRD36BQ8N2N9 1353 aa8.79□□□□□ -1
SCP2-212ENST00000488965 PANK1Q8TE04 598 aa8.79□□□□□ -1
SCP2-212ENST00000488965 RIMS2Q9UQ26 1411 aa8.79□□□□□ -1
SCP2-212ENST00000488965 TCP11L2Q8N4U5 519 aa8.78□□□□□ -1
SCP2-212ENST00000488965 DDRGK1Q96HY6 314 aa8.78□□□□□ -1
SCP2-212ENST00000488965 PNNQ9H307 717 aaKnown RBP8.78□□□□□ -1
SCP2-212ENST00000488965 ZNF521Q96K83 1311 aa8.78□□□□□ -1
SCP2-212ENST00000488965 COL3A1P02461 1466 aaPredicted RBP8.78□□□□□ -1
SCP2-212ENST00000488965 DIP2AQ14689 1571 aa8.78□□□□□ -1
SCP2-212ENST00000488965 ARHGAP23Q9P227 1491 aa8.78□□□□□ -1
SCP2-212ENST00000488965 E9PSI1 815 aa8.78□□□□□ -1
SCP2-212ENST00000488965 RTF1Q92541 710 aaKnown RBP8.78□□□□□ -1
SCP2-212ENST00000488965 AMPHP49418 695 aa8.77□□□□□ -1
SCP2-212ENST00000488965 TPRNQ4KMQ1 711 aa8.77□□□□□ -1
SCP2-212ENST00000488965 SLC26A8Q96RN1 970 aa8.77□□□□□ -1
SCP2-212ENST00000488965 ZMYM3Q14202 1370 aa8.77□□□□□ -1.01
SCP2-212ENST00000488965 NALCNQ8IZF0 1738 aa8.77□□□□□ -1.01
SCP2-212ENST00000488965 BCAR3O75815 825 aa8.77□□□□□ -1.01
SCP2-212ENST00000488965 RIPK4P57078 832 aa8.77□□□□□ -1.01
SCP2-212ENST00000488965 CABP1Q9NZU7 370 aa8.77□□□□□ -1.01
SCP2-212ENST00000488965 NSD3Q9BZ95 1437 aa8.77□□□□□ -1.01
SCP2-212ENST00000488965 USP54Q70EL1 1684 aa8.77□□□□□ -1.01
SCP2-212ENST00000488965 PDE4AP27815 886 aa8.77□□□□□ -1.01
SCP2-212ENST00000488965 WAPLQ7Z5K2 1190 aa8.77□□□□□ -1.01
SCP2-212ENST00000488965 COG3Q96JB2 828 aa8.77□□□□□ -1.01
SCP2-212ENST00000488965 ATP7BP35670 1465 aa8.77□□□□□ -1.01
SCP2-212ENST00000488965 XRN1Q8IZH2 1706 aaKnown RBP8.77□□□□□ -1.01
SCP2-212ENST00000488965 ABCC11Q96J66 1382 aa8.77□□□□□ -1.01
SCP2-212ENST00000488965 DIAPH1O60610 1272 aaKnown RBP8.76□□□□□ -1.01
SCP2-212ENST00000488965 SLKQ9H2G2 1235 aaPredicted RBP8.76□□□□□ -1.01
SCP2-212ENST00000488965 FAM135BQ49AJ0 1406 aa8.76□□□□□ -1.01
SCP2-212ENST00000488965 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.76□□□□□ -1.01
SCP2-212ENST00000488965 BECN1Q14457 450 aa8.76□□□□□ -1.01
SCP2-212ENST00000488965 SLC4A10Q6U841 1118 aa8.76□□□□□ -1.01
SCP2-212ENST00000488965 PMFBP1Q8TBY8 1022 aa8.75□□□□□ -1.01
SCP2-212ENST00000488965 TSR2Q969E8 191 aaKnown RBP8.75□□□□□ -1.01
SCP2-212ENST00000488965 RUNDC1Q96C34 613 aa8.75□□□□□ -1.01
SCP2-212ENST00000488965 NECTIN2Q92692 538 aa8.75□□□□□ -1.01
SCP2-212ENST00000488965 MS4A1P11836 297 aa8.74□□□□□ -1.01
SCP2-212ENST00000488965 FBLN1P23142 703 aa8.74□□□□□ -1.01
SCP2-212ENST00000488965 IPO8O15397 1037 aaKnown RBP8.74□□□□□ -1.01
SCP2-212ENST00000488965 CDK19Q9BWU1 502 aa8.74□□□□□ -1.01
SCP2-212ENST00000488965 ADAMTSL3P82987 1691 aa8.74□□□□□ -1.01
SCP2-212ENST00000488965 SIRT1Q96EB6 747 aa8.74□□□□□ -1.01
SCP2-212ENST00000488965 ATAD2Q6PL18 1390 aa8.74□□□□□ -1.01
SCP2-212ENST00000488965 CEBPAP49715 358 aaPredicted RBP8.73□□□□□ -1.01
SCP2-212ENST00000488965 MFAP1P55081 439 aaKnown RBP8.73□□□□□ -1.01
SCP2-212ENST00000488965 C20orf194Q5TEA3 1177 aa8.73□□□□□ -1.01
SCP2-212ENST00000488965 RWDD1Q9H446 243 aaPredicted RBP8.73□□□□□ -1.01
SCP2-212ENST00000488965 ADAMTS13Q76LX8 1427 aa8.73□□□□□ -1.01
SCP2-212ENST00000488965 MAP2P11137 1827 aaKnown RBP8.73□□□□□ -1.01
SCP2-212ENST00000488965 TNRQ92752 1358 aa8.73□□□□□ -1.01
SCP2-212ENST00000488965 PLEKHH1Q9ULM0 1364 aa8.73□□□□□ -1.01
SCP2-212ENST00000488965 NCBP3Q53F19 620 aaKnown RBP8.73□□□□□ -1.01
SCP2-212ENST00000488965 TRMT2AQ8IZ69 625 aaKnown RBP8.73□□□□□ -1.01
SCP2-212ENST00000488965 RBM33Q96EV2 1170 aaKnown RBP8.73□□□□□ -1.01
SCP2-212ENST00000488965 IPO9Q96P70 1041 aaKnown RBP8.73□□□□□ -1.01
SCP2-212ENST00000488965 RTN4Q9NQC3 1192 aaKnown RBP8.73□□□□□ -1.01
SCP2-212ENST00000488965 A0A1W2PP64 1363 aa8.72□□□□□ -1.01
SCP2-212ENST00000488965 CPSF1Q10570 1443 aaKnown RBP8.72□□□□□ -1.01
SCP2-212ENST00000488965 PRKAR2BP31323 418 aa8.72□□□□□ -1.01
SCP2-212ENST00000488965 MARF1Q9Y4F3 1742 aaKnown RBP8.72□□□□□ -1.01
SCP2-212ENST00000488965 TMEM2Q9UHN6 1383 aa8.72□□□□□ -1.01
SCP2-212ENST00000488965 CSB-PGBD3P0DP91 1061 aa8.72□□□□□ -1.01
SCP2-212ENST00000488965 ZKSCAN2Q63HK3 967 aa8.72□□□□□ -1.01
SCP2-212ENST00000488965 OS9Q13438 667 aaPredicted RBP8.71□□□□□ -1.01
SCP2-212ENST00000488965 RRS1Q15050 365 aaKnown RBP8.71□□□□□ -1.01
SCP2-212ENST00000488965 PLEKHG1Q9ULL1 1385 aa8.71□□□□□ -1.01
SCP2-212ENST00000488965 CENPQQ7L2Z9 268 aaPredicted RBP8.71□□□□□ -1.02
SCP2-212ENST00000488965 UBE2Q2Q8WVN8 375 aa8.71□□□□□ -1.02
SCP2-212ENST00000488965 EXOSC9Q06265 439 aaKnown RBP8.71□□□□□ -1.02
SCP2-212ENST00000488965 THUMPD2Q9BTF0 503 aaKnown RBP8.71□□□□□ -1.02
SCP2-212ENST00000488965 NGEFQ8N5V2 710 aa8.7□□□□□ -1.02
SCP2-212ENST00000488965 CHD2O14647 1828 aaKnown RBP8.7□□□□□ -1.02
SCP2-212ENST00000488965 ZNF330Q9Y3S2 320 aaPredicted RBP8.7□□□□□ -1.02
SCP2-212ENST00000488965 LRRC7Q96NW7 1537 aa8.7□□□□□ -1.02
SCP2-212ENST00000488965 DEKP35659 375 aaKnown RBP8.7□□□□□ -1.02
SCP2-212ENST00000488965 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.7□□□□□ -1.02
SCP2-212ENST00000488965 PHF23Q9BUL5 403 aaPredicted RBP8.7□□□□□ -1.02
SCP2-212ENST00000488965 RGPD1P0DJD0 1748 aa8.69□□□□□ -1.02
SCP2-212ENST00000488965 METP08581 1390 aa8.69□□□□□ -1.02
SCP2-212ENST00000488965 PNPLA6Q8IY17 1366 aa8.69□□□□□ -1.02
SCP2-212ENST00000488965 FMN2Q9NZ56 1722 aa8.69□□□□□ -1.02
SCP2-212ENST00000488965 NCLP19338 710 aaKnown RBP8.69□□□□□ -1.02
SCP2-212ENST00000488965 CALD1Q05682 793 aaKnown RBP8.69□□□□□ -1.02
SCP2-212ENST00000488965 FOXD4L1Q9NU39 408 aa8.69□□□□□ -1.02
SCP2-212ENST00000488965 CEP170BQ9Y4F5 1589 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms