RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.75□□□□□ -0.85
BEST3-205ENST00000488961 PHACTR3Q96KR7 559 aa9.75□□□□□ -0.85
BEST3-205ENST00000488961 CFAP53Q96M91 514 aa9.75□□□□□ -0.85
BEST3-205ENST00000488961 NKTRP30414 1462 aaKnown RBP9.74□□□□□ -0.85
BEST3-205ENST00000488961 PPLO60437 1756 aa9.74□□□□□ -0.85
BEST3-205ENST00000488961 ADGRB3O60242 1522 aa9.74□□□□□ -0.85
BEST3-205ENST00000488961 TULP4Q9NRJ4 1543 aa9.74□□□□□ -0.85
BEST3-205ENST00000488961 FRAT2O75474 233 aaPredicted RBP9.74□□□□□ -0.85
BEST3-205ENST00000488961 ESF1Q9H501 851 aaKnown RBP9.74□□□□□ -0.85
BEST3-205ENST00000488961 SMC4Q9NTJ3 1288 aa9.74□□□□□ -0.85
BEST3-205ENST00000488961 KDM2BQ8NHM5 1336 aa9.74□□□□□ -0.85
BEST3-205ENST00000488961 GLI2P10070 1586 aa9.74□□□□□ -0.85
BEST3-205ENST00000488961 C8orf34Q49A92 452 aa9.73□□□□□ -0.85
BEST3-205ENST00000488961 ITPRIPQ8IWB1 547 aa9.73□□□□□ -0.85
BEST3-205ENST00000488961 FTSJ3Q8IY81 847 aaKnown RBP9.73□□□□□ -0.85
BEST3-205ENST00000488961 ZNF428Q96B54 188 aa9.73□□□□□ -0.85
BEST3-205ENST00000488961 SLKQ9H2G2 1235 aaPredicted RBP9.73□□□□□ -0.85
BEST3-205ENST00000488961 MAPK8IP3Q9UPT6 1336 aa9.73□□□□□ -0.85
BEST3-205ENST00000488961 ADGRB1O14514 1584 aa9.73□□□□□ -0.85
BEST3-205ENST00000488961 IFT172Q9UG01 1749 aa9.73□□□□□ -0.85
BEST3-205ENST00000488961 ZBTB7CA1YPR0 619 aa9.73□□□□□ -0.85
BEST3-205ENST00000488961 PRKAR2BP31323 418 aa9.73□□□□□ -0.85
BEST3-205ENST00000488961 KRT24Q2M2I5 525 aa9.73□□□□□ -0.85
BEST3-205ENST00000488961 PMFBP1Q8TBY8 1022 aa9.73□□□□□ -0.85
BEST3-205ENST00000488961 BBXQ8WY36 941 aaPredicted RBP9.73□□□□□ -0.85
BEST3-205ENST00000488961 DIP2CQ9Y2E4 1556 aa9.73□□□□□ -0.85
BEST3-205ENST00000488961 MYOM2P54296 1465 aa9.72□□□□□ -0.85
BEST3-205ENST00000488961 TRMT2AQ8IZ69 625 aaKnown RBP9.72□□□□□ -0.85
BEST3-205ENST00000488961 CHMP4BQ9H444 224 aaKnown RBP9.72□□□□□ -0.85
BEST3-205ENST00000488961 APBB1O00213 710 aa9.72□□□□□ -0.85
BEST3-205ENST00000488961 CALD1Q05682 793 aaKnown RBP9.72□□□□□ -0.85
BEST3-205ENST00000488961 CENPQQ7L2Z9 268 aaPredicted RBP9.72□□□□□ -0.85
BEST3-205ENST00000488961 SSH1Q8WYL5 1049 aa9.72□□□□□ -0.85
BEST3-205ENST00000488961 MIS18AQ9NYP9 233 aa9.72□□□□□ -0.85
BEST3-205ENST00000488961 ARAP3Q8WWN8 1544 aa9.71□□□□□ -0.85
BEST3-205ENST00000488961 TMPOP42166 694 aaKnown RBP9.71□□□□□ -0.85
BEST3-205ENST00000488961 PIK3C2BO00750 1634 aa9.71□□□□□ -0.86
BEST3-205ENST00000488961 PAXIP1Q6ZW49 1069 aaPredicted RBP9.71□□□□□ -0.86
BEST3-205ENST00000488961 NAP1L2Q9ULW6 460 aaPredicted RBP9.71□□□□□ -0.86
BEST3-205ENST00000488961 NOB1Q9ULX3 412 aaKnown RBP9.71□□□□□ -0.86
BEST3-205ENST00000488961 TRIM35Q9UPQ4 493 aa9.71□□□□□ -0.86
BEST3-205ENST00000488961 MLH3Q9UHC1 1453 aa9.71□□□□□ -0.86
BEST3-205ENST00000488961 INSRP06213 1382 aa9.7□□□□□ -0.86
BEST3-205ENST00000488961 AEBP1Q8IUX7 1158 aa9.7□□□□□ -0.86
BEST3-205ENST00000488961 TSPYL6Q8N831 410 aa9.7□□□□□ -0.86
BEST3-205ENST00000488961 SETD1BQ9UPS6 1966 aaKnown RBP9.7□□□□□ -0.86
BEST3-205ENST00000488961 ATAD2Q6PL18 1390 aa9.7□□□□□ -0.86
BEST3-205ENST00000488961 NEXMIFQ5QGS0 1516 aa9.7□□□□□ -0.86
BEST3-205ENST00000488961 DIAPH1O60610 1272 aaKnown RBP9.69□□□□□ -0.86
BEST3-205ENST00000488961 TRHP20396 242 aaPredicted RBP9.69□□□□□ -0.86
BEST3-205ENST00000488961 SHPRHQ149N8 1683 aa9.69□□□□□ -0.86
BEST3-205ENST00000488961 HDGFL2Q7Z4V5 671 aaPredicted RBP9.69□□□□□ -0.86
BEST3-205ENST00000488961 TERF2IPQ9NYB0 399 aa9.69□□□□□ -0.86
BEST3-205ENST00000488961 PDZRN3Q9UPQ7 1066 aa9.69□□□□□ -0.86
BEST3-205ENST00000488961 YTHDC2Q9H6S0 1430 aaKnown RBP9.69□□□□□ -0.86
BEST3-205ENST00000488961 ARHGEF28Q8N1W1 1705 aaKnown RBP9.69□□□□□ -0.86
BEST3-205ENST00000488961 POLR3AO14802 1390 aaPredicted RBP9.69□□□□□ -0.86
BEST3-205ENST00000488961 TAF7LQ5H9L4 462 aa9.69□□□□□ -0.86
BEST3-205ENST00000488961 NECTIN2Q92692 538 aa9.69□□□□□ -0.86
BEST3-205ENST00000488961 METP08581 1390 aa9.68□□□□□ -0.86
BEST3-205ENST00000488961 ANKRD36BQ8N2N9 1353 aa9.68□□□□□ -0.86
BEST3-205ENST00000488961 FAM161AQ3B820 660 aa9.68□□□□□ -0.86
BEST3-205ENST00000488961 C14orf37Q86TY3 774 aa9.68□□□□□ -0.86
BEST3-205ENST00000488961 TRIM27P14373 513 aa9.68□□□□□ -0.86
BEST3-205ENST00000488961 GTF2E1P29083 439 aaPredicted RBP9.68□□□□□ -0.86
BEST3-205ENST00000488961 TMEM57Q8N5G2 664 aa9.68□□□□□ -0.86
BEST3-205ENST00000488961 SLC52A1Q9NWF4 448 aa9.68□□□□□ -0.86
BEST3-205ENST00000488961 POLKQ9UBT6 870 aa9.68□□□□□ -0.86
BEST3-205ENST00000488961 NRXN1Q9ULB1 1477 aa9.68□□□□□ -0.86
BEST3-205ENST00000488961 LTV1Q96GA3 475 aaPredicted RBP9.67□□□□□ -0.86
BEST3-205ENST00000488961 STAC3Q96MF2 364 aa9.67□□□□□ -0.86
BEST3-205ENST00000488961 ZC3H13Q5T200 1668 aaKnown RBP9.67□□□□□ -0.86
BEST3-205ENST00000488961 CLCN1P35523 988 aa9.67□□□□□ -0.86
BEST3-205ENST00000488961 RICTORQ6R327 1708 aa9.66□□□□□ -0.86
BEST3-205ENST00000488961 RPGRIP1LQ68CZ1 1315 aa9.66□□□□□ -0.86
BEST3-205ENST00000488961 MFAP1P55081 439 aaKnown RBP9.66□□□□□ -0.86
BEST3-205ENST00000488961 MCM10Q7L590 875 aa9.66□□□□□ -0.86
BEST3-205ENST00000488961 NUDT16Q96DE0 195 aaKnown RBP9.66□□□□□ -0.86
BEST3-205ENST00000488961 DDRGK1Q96HY6 314 aa9.66□□□□□ -0.86
BEST3-205ENST00000488961 PLEKHF1Q96S99 279 aa9.66□□□□□ -0.86
BEST3-205ENST00000488961 LNPKQ9C0E8 428 aa9.66□□□□□ -0.86
BEST3-205ENST00000488961 CLTCQ00610 1675 aaKnown RBP9.66□□□□□ -0.86
BEST3-205ENST00000488961 KIAA1210Q9ULL0 1709 aa9.66□□□□□ -0.86
BEST3-205ENST00000488961 FOXO3O43524 673 aa9.65□□□□□ -0.86
BEST3-205ENST00000488961 MS4A1P11836 297 aa9.65□□□□□ -0.86
BEST3-205ENST00000488961 PDCL3Q9H2J4 239 aa9.65□□□□□ -0.86
BEST3-205ENST00000488961 DZIP1LQ8IYY4 767 aaKnown RBP9.65□□□□□ -0.86
BEST3-205ENST00000488961 FOXD4L1Q9NU39 408 aa9.65□□□□□ -0.86
BEST3-205ENST00000488961 ZHX1Q9UKY1 873 aaPredicted RBP9.65□□□□□ -0.86
BEST3-205ENST00000488961 LTKP29376 864 aa9.65□□□□□ -0.87
BEST3-205ENST00000488961 NPC1L1Q9UHC9 1359 aa9.64□□□□□ -0.87
BEST3-205ENST00000488961 ZKSCAN2Q63HK3 967 aa9.64□□□□□ -0.87
BEST3-205ENST00000488961 MYH16Q9H6N6 1097 aa9.64□□□□□ -0.87
BEST3-205ENST00000488961 PTPRMP28827 1452 aa9.64□□□□□ -0.87
BEST3-205ENST00000488961 PREX1Q8TCU6 1659 aa9.64□□□□□ -0.87
BEST3-205ENST00000488961 HSP90AB2PQ58FF8 381 aa9.64□□□□□ -0.87
BEST3-205ENST00000488961 CD163L1Q9NR16 1453 aa9.63□□□□□ -0.87
BEST3-205ENST00000488961 LMTK2Q8IWU2 1503 aa9.63□□□□□ -0.87
BEST3-205ENST00000488961 MAP2P11137 1827 aaKnown RBP9.63□□□□□ -0.87
BEST3-205ENST00000488961 RIMS2Q9UQ26 1411 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms