RNA–Protein interactions for RNA: ENST00000488839.1

SFXN5-219, Transcript of sideroflexin 5, humanhuman

TSL 3

Gene SFXN5, Length 671 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-219ENST00000488839 FNBP4Q8N3X1 1017 aaPredicted RBP17.74■□□□□ 0.43
SFXN5-219ENST00000488839 USP32Q8NFA0 1604 aa17.73■□□□□ 0.43
SFXN5-219ENST00000488839 ADAMTS2O95450 1211 aa17.73■□□□□ 0.43
SFXN5-219ENST00000488839 XPCQ01831 940 aaPredicted RBP17.73■□□□□ 0.43
SFXN5-219ENST00000488839 ARHGEF10O15013 1369 aa17.73■□□□□ 0.43
SFXN5-219ENST00000488839 CDK12Q9NYV4 1490 aaPredicted RBP17.73■□□□□ 0.43
SFXN5-219ENST00000488839 GPRASP1Q5JY77 1395 aa17.72■□□□□ 0.43
SFXN5-219ENST00000488839 TNS3Q68CZ2 1445 aa17.72■□□□□ 0.43
SFXN5-219ENST00000488839 PRR36Q9H6K5 1346 aa17.72■□□□□ 0.43
SFXN5-219ENST00000488839 NUDT16Q96DE0 195 aaKnown RBP17.71■□□□□ 0.43
SFXN5-219ENST00000488839 CDK19Q9BWU1 502 aa17.71■□□□□ 0.43
SFXN5-219ENST00000488839 CENPJQ9HC77 1338 aaPredicted RBP17.71■□□□□ 0.42
SFXN5-219ENST00000488839 RBM6P78332 1123 aaKnown RBP17.7■□□□□ 0.42
SFXN5-219ENST00000488839 PMFBP1Q8TBY8 1022 aa17.7■□□□□ 0.42
SFXN5-219ENST00000488839 QTRT2Q9H974 415 aaKnown RBP17.7■□□□□ 0.42
SFXN5-219ENST00000488839 CCDC61Q9Y6R9 512 aa17.7■□□□□ 0.42
SFXN5-219ENST00000488839 NGDNQ8NEJ9 315 aaKnown RBP17.69■□□□□ 0.42
SFXN5-219ENST00000488839 USP21Q9UK80 565 aa17.69■□□□□ 0.42
SFXN5-219ENST00000488839 TRPC5Q9UL62 973 aaPredicted RBP17.68■□□□□ 0.42
SFXN5-219ENST00000488839 ITSN1Q15811 1721 aa17.67■□□□□ 0.42
SFXN5-219ENST00000488839 PLEKHG3A1L390 1219 aa17.67■□□□□ 0.42
SFXN5-219ENST00000488839 TRPM1Q7Z4N2 1603 aa17.67■□□□□ 0.42
SFXN5-219ENST00000488839 ATP7BP35670 1465 aa17.67■□□□□ 0.42
SFXN5-219ENST00000488839 MARF1Q9Y4F3 1742 aaKnown RBP17.66■□□□□ 0.42
SFXN5-219ENST00000488839 ROCK2O75116 1388 aaKnown RBP17.66■□□□□ 0.42
SFXN5-219ENST00000488839 TONSLQ96HA7 1378 aa17.66■□□□□ 0.42
SFXN5-219ENST00000488839 EVX2Q03828 476 aa17.65■□□□□ 0.42
SFXN5-219ENST00000488839 POLR3AO14802 1390 aaPredicted RBP17.65■□□□□ 0.42
SFXN5-219ENST00000488839 HAP1P54257 671 aaPredicted RBP17.63■□□□□ 0.41
SFXN5-219ENST00000488839 LMOD2Q6P5Q4 547 aa17.63■□□□□ 0.41
SFXN5-219ENST00000488839 TRPM3Q9HCF6 1732 aaPredicted RBP17.63■□□□□ 0.41
SFXN5-219ENST00000488839 BRD4O60885 1362 aaPredicted RBP17.63■□□□□ 0.41
SFXN5-219ENST00000488839 BCL9LQ86UU0 1499 aa17.63■□□□□ 0.41
SFXN5-219ENST00000488839 SRPK2P78362 688 aaKnown RBP17.62■□□□□ 0.41
SFXN5-219ENST00000488839 ATRNO75882 1429 aa17.62■□□□□ 0.41
SFXN5-219ENST00000488839 SLIT2O94813 1529 aa17.62■□□□□ 0.41
SFXN5-219ENST00000488839 NBPF8Q3BBV2 869 aa17.61■□□□□ 0.41
SFXN5-219ENST00000488839 UNC5CLQ8IV45 518 aa17.61■□□□□ 0.41
SFXN5-219ENST00000488839 EVC2Q86UK5 1308 aa17.61■□□□□ 0.41
SFXN5-219ENST00000488839 ACEP12821 1306 aa17.6■□□□□ 0.41
SFXN5-219ENST00000488839 TOPAZ1Q8N9V7 1692 aa17.6■□□□□ 0.41
SFXN5-219ENST00000488839 ALS2Q96Q42 1657 aa17.6■□□□□ 0.41
SFXN5-219ENST00000488839 QRICH2Q9H0J4 1663 aa17.59■□□□□ 0.41
SFXN5-219ENST00000488839 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.58■□□□□ 0.41
SFXN5-219ENST00000488839 SBNO2Q9Y2G9 1366 aa17.58■□□□□ 0.4
SFXN5-219ENST00000488839 CLSPNQ9HAW4 1339 aa17.58■□□□□ 0.4
SFXN5-219ENST00000488839 PAK3O75914 559 aaPredicted RBP17.58■□□□□ 0.4
SFXN5-219ENST00000488839 CABLES1Q8TDN4 633 aa17.58■□□□□ 0.4
SFXN5-219ENST00000488839 SLC24A1O60721 1099 aa17.57■□□□□ 0.4
SFXN5-219ENST00000488839 GJD4Q96KN9 370 aaPredicted RBP17.57■□□□□ 0.4
SFXN5-219ENST00000488839 CARD11Q9BXL7 1154 aa17.57■□□□□ 0.4
SFXN5-219ENST00000488839 CABP2Q9NPB3 220 aa17.57■□□□□ 0.4
SFXN5-219ENST00000488839 TIMELESSQ9UNS1 1208 aa17.57■□□□□ 0.4
SFXN5-219ENST00000488839 RALGAPBQ86X10 1494 aa17.56■□□□□ 0.4
SFXN5-219ENST00000488839 PPIP5K1Q6PFW1 1433 aa17.56■□□□□ 0.4
SFXN5-219ENST00000488839 RGS12O14924 1447 aa17.55■□□□□ 0.4
SFXN5-219ENST00000488839 SPDYE1Q8NFV5 336 aaPredicted RBP17.55■□□□□ 0.4
SFXN5-219ENST00000488839 ABCA3Q99758 1704 aa17.55■□□□□ 0.4
SFXN5-219ENST00000488839 NWD2Q9ULI1 1742 aa17.55■□□□□ 0.4
SFXN5-219ENST00000488839 FAM83GA6ND36 823 aa17.54■□□□□ 0.4
SFXN5-219ENST00000488839 PRKAR2AP13861 404 aaKnown RBP17.54■□□□□ 0.4
SFXN5-219ENST00000488839 VPS72Q15906 364 aa17.54■□□□□ 0.4
SFXN5-219ENST00000488839 ZNF692Q9BU19 519 aaPredicted RBP17.54■□□□□ 0.4
SFXN5-219ENST00000488839 UPF1Q92900 1129 aaKnown RBP eCLIP17.53■□□□□ 0.4
SFXN5-219ENST00000488839 PUS7Q96PZ0 661 aaKnown RBP17.53■□□□□ 0.4
SFXN5-219ENST00000488839 CABP1Q9NZU7 370 aa17.53■□□□□ 0.4
SFXN5-219ENST00000488839 ATAD2Q6PL18 1390 aa17.53■□□□□ 0.4
SFXN5-219ENST00000488839 ABTB2Q8N961 1025 aa17.52■□□□□ 0.4
SFXN5-219ENST00000488839 NLRP13Q86W25 1043 aa17.51■□□□□ 0.39
SFXN5-219ENST00000488839 CLEC11AQ9Y240 323 aa17.51■□□□□ 0.39
SFXN5-219ENST00000488839 COL14A1Q05707 1796 aaKnown RBP17.51■□□□□ 0.39
SFXN5-219ENST00000488839 ONECUT3O60422 494 aaPredicted RBP17.5■□□□□ 0.39
SFXN5-219ENST00000488839 CRYBG1Q9Y4K1 1723 aa17.5■□□□□ 0.39
SFXN5-219ENST00000488839 USP6P35125 1406 aa17.48■□□□□ 0.39
SFXN5-219ENST00000488839 PRDM11Q9NQV5 511 aa17.48■□□□□ 0.39
SFXN5-219ENST00000488839 BTG4Q9NY30 223 aa17.48■□□□□ 0.39
SFXN5-219ENST00000488839 PLCH1Q4KWH8 1693 aa17.48■□□□□ 0.39
SFXN5-219ENST00000488839 USP19O94966 1318 aa17.47■□□□□ 0.39
SFXN5-219ENST00000488839 SSH2Q76I76 1423 aa17.47■□□□□ 0.39
SFXN5-219ENST00000488839 PLEKHG5O94827 1062 aa17.47■□□□□ 0.39
SFXN5-219ENST00000488839 CCDC125Q86Z20 511 aa17.46■□□□□ 0.39
SFXN5-219ENST00000488839 GLI3P10071 1580 aa17.45■□□□□ 0.38
SFXN5-219ENST00000488839 CPDO75976 1380 aa17.45■□□□□ 0.38
SFXN5-219ENST00000488839 CPSF1Q10570 1443 aaKnown RBP17.45■□□□□ 0.38
SFXN5-219ENST00000488839 TTC21AQ8NDW8 1320 aa17.45■□□□□ 0.38
SFXN5-219ENST00000488839 KIAA0232Q92628 1395 aa17.44■□□□□ 0.38
SFXN5-219ENST00000488839 CCDC9Q9Y3X0 531 aaKnown RBP17.44■□□□□ 0.38
SFXN5-219ENST00000488839 PHRF1Q9P1Y6 1649 aaKnown RBP17.43■□□□□ 0.38
SFXN5-219ENST00000488839 GCP02774 474 aa17.43■□□□□ 0.38
SFXN5-219ENST00000488839 MKRN4PQ13434 485 aaPredicted RBP17.43■□□□□ 0.38
SFXN5-219ENST00000488839 NUTM2GQ5VZR2 741 aa17.43■□□□□ 0.38
SFXN5-219ENST00000488839 PCGF6Q9BYE7 350 aa17.43■□□□□ 0.38
SFXN5-219ENST00000488839 SSUH2Q9Y2M2 353 aa17.43■□□□□ 0.38
SFXN5-219ENST00000488839 NRAPQ86VF7 1730 aa17.43■□□□□ 0.38
SFXN5-219ENST00000488839 NLRP6P59044 892 aa17.42■□□□□ 0.38
SFXN5-219ENST00000488839 TTC21BQ7Z4L5 1316 aa17.42■□□□□ 0.38
SFXN5-219ENST00000488839 C19orf67A6NJJ6 358 aa17.41■□□□□ 0.38
SFXN5-219ENST00000488839 ZC3H6P61129 1189 aaKnown RBP17.41■□□□□ 0.38
SFXN5-219ENST00000488839 SEPT12Q8IYM1 358 aa17.41■□□□□ 0.38
SFXN5-219ENST00000488839 SPATA31A5Q5VU36 1347 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms