RNA–Protein interactions for RNA: ENST00000488828.1

NUP98-212, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-212ENST00000488828 SOS2Q07890 1332 aaPredicted RBP15.54■□□□□ 0.08
NUP98-212ENST00000488828 CCDC61Q9Y6R9 512 aa15.54■□□□□ 0.08
NUP98-212ENST00000488828 ANKARQ7Z5J8 1434 aa15.53■□□□□ 0.08
NUP98-212ENST00000488828 PRR36Q9H6K5 1346 aa15.53■□□□□ 0.08
NUP98-212ENST00000488828 PAK3O75914 559 aaPredicted RBP15.53■□□□□ 0.08
NUP98-212ENST00000488828 RALGAPBQ86X10 1494 aa15.52■□□□□ 0.08
NUP98-212ENST00000488828 GPRASP1Q5JY77 1395 aa15.52■□□□□ 0.08
NUP98-212ENST00000488828 SPATA31A6Q5VVP1 1343 aa15.52■□□□□ 0.08
NUP98-212ENST00000488828 SLC24A1O60721 1099 aa15.52■□□□□ 0.08
NUP98-212ENST00000488828 COL16A1Q07092 1604 aaPredicted RBP15.52■□□□□ 0.08
NUP98-212ENST00000488828 ST20-MTHFSA0A0A6YYL1 179 aa15.51■□□□□ 0.07
NUP98-212ENST00000488828 ADGRB2O60241 1585 aa15.5■□□□□ 0.07
NUP98-212ENST00000488828 TULP4Q9NRJ4 1543 aa15.5■□□□□ 0.07
NUP98-212ENST00000488828 HAP1P54257 671 aaPredicted RBP15.5■□□□□ 0.07
NUP98-212ENST00000488828 RGPD8O14715 1765 aaPredicted RBP15.49■□□□□ 0.07
NUP98-212ENST00000488828 ADAMTS2O95450 1211 aa15.49■□□□□ 0.07
NUP98-212ENST00000488828 CABP1Q9NZU7 370 aa15.49■□□□□ 0.07
NUP98-212ENST00000488828 NHSL1Q5SYE7 1610 aa15.49■□□□□ 0.07
NUP98-212ENST00000488828 QRICH2Q9H0J4 1663 aa15.48■□□□□ 0.07
NUP98-212ENST00000488828 PNPLA6Q8IY17 1366 aa15.48■□□□□ 0.07
NUP98-212ENST00000488828 ACEP12821 1306 aa15.47■□□□□ 0.07
NUP98-212ENST00000488828 MED1Q15648 1581 aaPredicted RBP15.47■□□□□ 0.07
NUP98-212ENST00000488828 TMC1Q8TDI8 760 aa15.47■□□□□ 0.07
NUP98-212ENST00000488828 SPATA31A3Q5VYP0 1347 aa15.46■□□□□ 0.07
NUP98-212ENST00000488828 PLEKHG3A1L390 1219 aa15.46■□□□□ 0.07
NUP98-212ENST00000488828 C8orf37Q96NL8 207 aa15.46■□□□□ 0.07
NUP98-212ENST00000488828 KIF1AQ12756 1690 aa15.46■□□□□ 0.07
NUP98-212ENST00000488828 USP32Q8NFA0 1604 aa15.46■□□□□ 0.06
NUP98-212ENST00000488828 PXDNQ92626 1479 aa15.46■□□□□ 0.06
NUP98-212ENST00000488828 PPIP5K1Q6PFW1 1433 aa15.45■□□□□ 0.06
NUP98-212ENST00000488828 NGLY1Q96IV0 654 aa15.45■□□□□ 0.06
NUP98-212ENST00000488828 USP47Q96K76 1375 aa15.45■□□□□ 0.06
NUP98-212ENST00000488828 CABLES1Q8TDN4 633 aa15.44■□□□□ 0.06
NUP98-212ENST00000488828 ATP7BP35670 1465 aa15.44■□□□□ 0.06
NUP98-212ENST00000488828 TMF1P82094 1093 aa15.43■□□□□ 0.06
NUP98-212ENST00000488828 SBNO1A3KN83 1393 aa15.43■□□□□ 0.06
NUP98-212ENST00000488828 SHPRHQ149N8 1683 aa15.42■□□□□ 0.06
NUP98-212ENST00000488828 NUTM2GQ5VZR2 741 aa15.42■□□□□ 0.06
NUP98-212ENST00000488828 ARHGEF10O15013 1369 aa15.41■□□□□ 0.06
NUP98-212ENST00000488828 ATAD2Q6PL18 1390 aa15.41■□□□□ 0.06
NUP98-212ENST00000488828 ABTB2Q8N961 1025 aa15.41■□□□□ 0.06
NUP98-212ENST00000488828 TESK2Q96S53 571 aa15.41■□□□□ 0.06
NUP98-212ENST00000488828 TNS3Q68CZ2 1445 aa15.41■□□□□ 0.06
NUP98-212ENST00000488828 SBNO2Q9Y2G9 1366 aa15.4■□□□□ 0.06
NUP98-212ENST00000488828 EIF4G2P78344 907 aaKnown RBP eCLIP15.4■□□□□ 0.06
NUP98-212ENST00000488828 POLR3GLQ9BT43 218 aa15.4■□□□□ 0.06
NUP98-212ENST00000488828 ITSN1Q15811 1721 aa15.4■□□□□ 0.06
NUP98-212ENST00000488828 LRP6O75581 1613 aa15.39■□□□□ 0.05
NUP98-212ENST00000488828 ZNF772Q68DY9 489 aaPredicted RBP15.39■□□□□ 0.05
NUP98-212ENST00000488828 SLC12A5Q9H2X9 1139 aa15.39■□□□□ 0.05
NUP98-212ENST00000488828 RGS17Q9UGC6 210 aaPredicted RBP15.39■□□□□ 0.05
NUP98-212ENST00000488828 AFF2P51816 1311 aa15.39■□□□□ 0.05
NUP98-212ENST00000488828 POLR3AO14802 1390 aaPredicted RBP15.38■□□□□ 0.05
NUP98-212ENST00000488828 CDCA8Q53HL2 280 aa15.38■□□□□ 0.05
NUP98-212ENST00000488828 HDGFL2Q7Z4V5 671 aaPredicted RBP15.38■□□□□ 0.05
NUP98-212ENST00000488828 PRR29P0C7W0 189 aa15.37■□□□□ 0.05
NUP98-212ENST00000488828 ILDR2Q71H61 639 aa15.37■□□□□ 0.05
NUP98-212ENST00000488828 TERF2IPQ9NYB0 399 aa15.37■□□□□ 0.05
NUP98-212ENST00000488828 HSPA5P11021 654 aaKnown RBP15.36■□□□□ 0.05
NUP98-212ENST00000488828 POTEAQ6S8J7 498 aa15.36■□□□□ 0.05
NUP98-212ENST00000488828 PUS7Q96PZ0 661 aaKnown RBP15.36■□□□□ 0.05
NUP98-212ENST00000488828 USP21Q9UK80 565 aa15.36■□□□□ 0.05
NUP98-212ENST00000488828 KTN1Q86UP2 1357 aaKnown RBP15.36■□□□□ 0.05
NUP98-212ENST00000488828 FXR2P51116 673 aaKnown RBP eCLIP15.35■□□□□ 0.056e-6■□□□□ 9.4
NUP98-212ENST00000488828 NLRP6P59044 892 aa15.35■□□□□ 0.05
NUP98-212ENST00000488828 NLRP13Q86W25 1043 aa15.35■□□□□ 0.05
NUP98-212ENST00000488828 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.35■□□□□ 0.05
NUP98-212ENST00000488828 PIP4P2Q8N4L2 257 aa15.35■□□□□ 0.05
NUP98-212ENST00000488828 QTRT2Q9H974 415 aaKnown RBP15.35■□□□□ 0.05
NUP98-212ENST00000488828 ZBTB7CA1YPR0 619 aa15.33■□□□□ 0.04
NUP98-212ENST00000488828 TOPAZ1Q8N9V7 1692 aa15.32■□□□□ 0.04
NUP98-212ENST00000488828 ZC3H6P61129 1189 aaKnown RBP15.32■□□□□ 0.04
NUP98-212ENST00000488828 TTC21BQ7Z4L5 1316 aa15.32■□□□□ 0.04
NUP98-212ENST00000488828 USP6P35125 1406 aa15.32■□□□□ 0.04
NUP98-212ENST00000488828 COL22A1Q8NFW1 1626 aaPredicted RBP15.32■□□□□ 0.04
NUP98-212ENST00000488828 FAM83GA6ND36 823 aa15.31■□□□□ 0.04
NUP98-212ENST00000488828 RXRBP28702 533 aa15.31■□□□□ 0.04
NUP98-212ENST00000488828 PRDM11Q9NQV5 511 aa15.31■□□□□ 0.04
NUP98-212ENST00000488828 CCDC9Q9Y3X0 531 aaKnown RBP15.31■□□□□ 0.04
NUP98-212ENST00000488828 BRD4O60885 1362 aaPredicted RBP15.31■□□□□ 0.04
NUP98-212ENST00000488828 SOX12O15370 315 aa15.3■□□□□ 0.04
NUP98-212ENST00000488828 FNBP4Q8N3X1 1017 aaPredicted RBP15.3■□□□□ 0.04
NUP98-212ENST00000488828 TRPM3Q9HCF6 1732 aaPredicted RBP15.29■□□□□ 0.04
NUP98-212ENST00000488828 TRPC5Q9UL62 973 aaPredicted RBP15.29■□□□□ 0.04
NUP98-212ENST00000488828 TTC21AQ8NDW8 1320 aa15.28■□□□□ 0.04
NUP98-212ENST00000488828 GCP02774 474 aa15.28■□□□□ 0.04
NUP98-212ENST00000488828 CHRNA2Q15822 529 aa15.28■□□□□ 0.04
NUP98-212ENST00000488828 POTEHQ6S545 545 aa15.28■□□□□ 0.04
NUP98-212ENST00000488828 CPSF1Q10570 1443 aaKnown RBP15.27■□□□□ 0.04
NUP98-212ENST00000488828 NINLQ9Y2I6 1382 aa15.27■□□□□ 0.04
NUP98-212ENST00000488828 UNC5CLQ8IV45 518 aa15.27■□□□□ 0.04
NUP98-212ENST00000488828 BTG4Q9NY30 223 aa15.27■□□□□ 0.04
NUP98-212ENST00000488828 ALS2Q96Q42 1657 aa15.26■□□□□ 0.03
NUP98-212ENST00000488828 EVA1CP58658 441 aa15.26■□□□□ 0.03
NUP98-212ENST00000488828 RBM6P78332 1123 aaKnown RBP15.26■□□□□ 0.03
NUP98-212ENST00000488828 NME9Q86XW9 330 aa15.26■□□□□ 0.03
NUP98-212ENST00000488828 ZRANB1Q9UGI0 708 aa15.26■□□□□ 0.03
NUP98-212ENST00000488828 A0A1W2PP64 1363 aa15.25■□□□□ 0.03
NUP98-212ENST00000488828 KIAA0232Q92628 1395 aa15.25■□□□□ 0.03
NUP98-212ENST00000488828 STRN4Q9NRL3 753 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms