RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 EP400Q96L91 3159 aa18.82■□□□□ 0.6
ATPAF2-207ENST00000488753 ONECUT3O60422 494 aaPredicted RBP18.82■□□□□ 0.6
ATPAF2-207ENST00000488753 PLCH1Q4KWH8 1693 aa18.8■□□□□ 0.6
ATPAF2-207ENST00000488753 NBPF8Q3BBV2 869 aa18.8■□□□□ 0.6
ATPAF2-207ENST00000488753 TOPAZ1Q8N9V7 1692 aa18.79■□□□□ 0.6
ATPAF2-207ENST00000488753 ACEP12821 1306 aa18.79■□□□□ 0.6
ATPAF2-207ENST00000488753 CCDC9Q9Y3X0 531 aaKnown RBP18.79■□□□□ 0.6
ATPAF2-207ENST00000488753 SEPT12Q8IYM1 358 aa18.78■□□□□ 0.6
ATPAF2-207ENST00000488753 SIN3AQ96ST3 1273 aa18.78■□□□□ 0.6
ATPAF2-207ENST00000488753 BTG4Q9NY30 223 aa18.78■□□□□ 0.6
ATPAF2-207ENST00000488753 COL14A1Q05707 1796 aaKnown RBP18.78■□□□□ 0.6
ATPAF2-207ENST00000488753 SRPK2P78362 688 aaKnown RBP18.77■□□□□ 0.6
ATPAF2-207ENST00000488753 PRDM11Q9NQV5 511 aa18.76■□□□□ 0.59
ATPAF2-207ENST00000488753 BRD4O60885 1362 aaPredicted RBP18.76■□□□□ 0.59
ATPAF2-207ENST00000488753 CRYBG1Q9Y4K1 1723 aa18.75■□□□□ 0.59
ATPAF2-207ENST00000488753 NEUROD1Q13562 356 aa18.75■□□□□ 0.59
ATPAF2-207ENST00000488753 BLMP54132 1417 aaPredicted RBP18.74■□□□□ 0.59
ATPAF2-207ENST00000488753 PPIP5K1Q6PFW1 1433 aa18.74■□□□□ 0.59
ATPAF2-207ENST00000488753 NRAPQ86VF7 1730 aa18.74■□□□□ 0.59
ATPAF2-207ENST00000488753 ROCK2O75116 1388 aaKnown RBP18.73■□□□□ 0.59
ATPAF2-207ENST00000488753 KIAA0232Q92628 1395 aa18.73■□□□□ 0.59
ATPAF2-207ENST00000488753 KRT27Q7Z3Y8 459 aa18.73■□□□□ 0.59
ATPAF2-207ENST00000488753 CABP2Q9NPB3 220 aa18.73■□□□□ 0.59
ATPAF2-207ENST00000488753 SPATA31A5Q5VU36 1347 aa18.73■□□□□ 0.59
ATPAF2-207ENST00000488753 EVC2Q86UK5 1308 aa18.73■□□□□ 0.59
ATPAF2-207ENST00000488753 SPATA31A7Q8IWB4 1347 aa18.73■□□□□ 0.59
ATPAF2-207ENST00000488753 TRPM1Q7Z4N2 1603 aa18.72■□□□□ 0.59
ATPAF2-207ENST00000488753 ABTB2Q8N961 1025 aa18.72■□□□□ 0.59
ATPAF2-207ENST00000488753 QRICH2Q9H0J4 1663 aa18.71■□□□□ 0.59
ATPAF2-207ENST00000488753 USP19O94966 1318 aa18.71■□□□□ 0.59
ATPAF2-207ENST00000488753 FAM98CQ17RN3 349 aaKnown RBP18.7■□□□□ 0.58
ATPAF2-207ENST00000488753 ZC3H6P61129 1189 aaKnown RBP18.69■□□□□ 0.58
ATPAF2-207ENST00000488753 NUTM2GQ5VZR2 741 aa18.69■□□□□ 0.58
ATPAF2-207ENST00000488753 NLRP13Q86W25 1043 aa18.69■□□□□ 0.58
ATPAF2-207ENST00000488753 PHRF1Q9P1Y6 1649 aaKnown RBP18.69■□□□□ 0.58
ATPAF2-207ENST00000488753 CPDO75976 1380 aa18.68■□□□□ 0.58
ATPAF2-207ENST00000488753 A0A0G2JS52 829 aa18.68■□□□□ 0.58
ATPAF2-207ENST00000488753 MYT1Q01538 1121 aa18.68■□□□□ 0.58
ATPAF2-207ENST00000488753 CABP1Q9NZU7 370 aa18.68■□□□□ 0.58
ATPAF2-207ENST00000488753 USP6P35125 1406 aa18.67■□□□□ 0.58
ATPAF2-207ENST00000488753 SF3B2Q13435 895 aaKnown RBP18.67■□□□□ 0.58
ATPAF2-207ENST00000488753 CHRNA2Q15822 529 aa18.67■□□□□ 0.58
ATPAF2-207ENST00000488753 ZRANB1Q9UGI0 708 aa18.67■□□□□ 0.58
ATPAF2-207ENST00000488753 BRWD3Q6RI45 1802 aa18.67■□□□□ 0.58
ATPAF2-207ENST00000488753 SPATA31A1Q5TZJ5 1347 aa18.66■□□□□ 0.58
ATPAF2-207ENST00000488753 NRKQ7Z2Y5 1582 aa18.65■□□□□ 0.58
ATPAF2-207ENST00000488753 GCP02774 474 aa18.65■□□□□ 0.58
ATPAF2-207ENST00000488753 SBNO2Q9Y2G9 1366 aa18.65■□□□□ 0.58
ATPAF2-207ENST00000488753 SSH2Q76I76 1423 aa18.65■□□□□ 0.58
ATPAF2-207ENST00000488753 SRCAPQ6ZRS2 3230 aa18.64■□□□□ 0.57
ATPAF2-207ENST00000488753 ZNF692Q9BU19 519 aaPredicted RBP18.64■□□□□ 0.57
ATPAF2-207ENST00000488753 STRN4Q9NRL3 753 aa18.63■□□□□ 0.57
ATPAF2-207ENST00000488753 EVA1CP58658 441 aa18.62■□□□□ 0.57
ATPAF2-207ENST00000488753 TONSLQ96HA7 1378 aa18.62■□□□□ 0.57
ATPAF2-207ENST00000488753 THSD7AQ9UPZ6 1657 aa18.62■□□□□ 0.57
ATPAF2-207ENST00000488753 NLRP6P59044 892 aa18.61■□□□□ 0.57
ATPAF2-207ENST00000488753 BARGINQ6ZT62 677 aa18.61■□□□□ 0.57
ATPAF2-207ENST00000488753 CARD11Q9BXL7 1154 aa18.61■□□□□ 0.57
ATPAF2-207ENST00000488753 CAMTA1Q9Y6Y1 1673 aa18.6■□□□□ 0.57
ATPAF2-207ENST00000488753 DEFB132Q7Z7B7 95 aa18.6■□□□□ 0.57
ATPAF2-207ENST00000488753 LMO7Q8WWI1 1683 aa18.6■□□□□ 0.57
ATPAF2-207ENST00000488753 SLIT3O75094 1523 aa18.59■□□□□ 0.57
ATPAF2-207ENST00000488753 TRIM26Q12899 539 aaPredicted RBP18.59■□□□□ 0.57
ATPAF2-207ENST00000488753 TTC21AQ8NDW8 1320 aa18.58■□□□□ 0.57
ATPAF2-207ENST00000488753 BAG6P46379 1132 aa18.58■□□□□ 0.56
ATPAF2-207ENST00000488753 LARP1Q6PKG0 1096 aaKnown RBP18.58■□□□□ 0.56
ATPAF2-207ENST00000488753 THRAP3Q9Y2W1 955 aaKnown RBP18.58■□□□□ 0.56
ATPAF2-207ENST00000488753 CPSF1Q10570 1443 aaKnown RBP18.57■□□□□ 0.56
ATPAF2-207ENST00000488753 AATKQ6ZMQ8 1374 aa18.57■□□□□ 0.56
ATPAF2-207ENST00000488753 TTC21BQ7Z4L5 1316 aa18.57■□□□□ 0.56
ATPAF2-207ENST00000488753 TCP11L2Q8N4U5 519 aa18.57■□□□□ 0.56
ATPAF2-207ENST00000488753 COL5A2P05997 1499 aaPredicted RBP18.57■□□□□ 0.56
ATPAF2-207ENST00000488753 USP35Q9P2H5 1018 aa18.56■□□□□ 0.56
ATPAF2-207ENST00000488753 FAM196AQ6ZSG2 479 aa18.55■□□□□ 0.56
ATPAF2-207ENST00000488753 KCNH5Q8NCM2 988 aa18.55■□□□□ 0.56
ATPAF2-207ENST00000488753 DISP2A7MBM2 1401 aa18.55■□□□□ 0.56
ATPAF2-207ENST00000488753 PIK3C2AO00443 1686 aa18.54■□□□□ 0.56
ATPAF2-207ENST00000488753 KTN1Q86UP2 1357 aaKnown RBP18.54■□□□□ 0.56
ATPAF2-207ENST00000488753 CRB1P82279 1406 aa18.53■□□□□ 0.56
ATPAF2-207ENST00000488753 FAM182BQ5T319 152 aa18.53■□□□□ 0.56
ATPAF2-207ENST00000488753 PUS7Q96PZ0 661 aaKnown RBP18.53■□□□□ 0.56
ATPAF2-207ENST00000488753 PDE3BQ13370 1112 aa18.52■□□□□ 0.56
ATPAF2-207ENST00000488753 AKAP12Q02952 1782 aa18.51■□□□□ 0.55
ATPAF2-207ENST00000488753 ARHGEF25Q86VW2 580 aa18.51■□□□□ 0.55
ATPAF2-207ENST00000488753 RGPD1P0DJD0 1748 aa18.51■□□□□ 0.55
ATPAF2-207ENST00000488753 C11orf95C9JLR9 678 aaPredicted RBP18.5■□□□□ 0.55
ATPAF2-207ENST00000488753 SLC24A1O60721 1099 aa18.5■□□□□ 0.55
ATPAF2-207ENST00000488753 ZBTB7CA1YPR0 619 aa18.49■□□□□ 0.55
ATPAF2-207ENST00000488753 USP31Q70CQ4 1352 aa18.48■□□□□ 0.55
ATPAF2-207ENST00000488753 HDGFL2Q7Z4V5 671 aaPredicted RBP18.48■□□□□ 0.55
ATPAF2-207ENST00000488753 WDR17Q8IZU2 1322 aa18.48■□□□□ 0.55
ATPAF2-207ENST00000488753 CD163L1Q9NR16 1453 aa18.47■□□□□ 0.55
ATPAF2-207ENST00000488753 PARD3Q8TEW0 1356 aa18.47■□□□□ 0.55
ATPAF2-207ENST00000488753 TRIM37O94972 964 aa18.47■□□□□ 0.55
ATPAF2-207ENST00000488753 EN1Q05925 392 aaPredicted RBP18.47■□□□□ 0.55
ATPAF2-207ENST00000488753 AXIN2Q9Y2T1 843 aa18.47■□□□□ 0.55
ATPAF2-207ENST00000488753 ABCC6O95255 1503 aa18.46■□□□□ 0.55
ATPAF2-207ENST00000488753 TOM1L2Q6ZVM7 507 aa18.46■□□□□ 0.55
ATPAF2-207ENST00000488753 TMC1Q8TDI8 760 aa18.46■□□□□ 0.55
ATPAF2-207ENST00000488753 MON2Q7Z3U7 1717 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms