RNA–Protein interactions for RNA: ENST00000488536.1

UBA7-208, Transcript of ubiquitin like modifier activating enzyme 7, humanhuman

TSL 2

Gene UBA7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA7-208ENST00000488536 PLEKHG3A1L390 1219 aa18.32■□□□□ 0.52
UBA7-208ENST00000488536 CT47B1P0C2W7 299 aaPredicted RBP18.32■□□□□ 0.52
UBA7-208ENST00000488536 U2AF1L5P0DN76 240 aaPredicted RBP18.32■□□□□ 0.52
UBA7-208ENST00000488536 U2AF1Q01081 240 aaKnown RBP eCLIP18.32■□□□□ 0.52
UBA7-208ENST00000488536 ITSN1Q15811 1721 aa18.32■□□□□ 0.52
UBA7-208ENST00000488536 DIAPH1O60610 1272 aaKnown RBP18.31■□□□□ 0.52
UBA7-208ENST00000488536 MYH16Q9H6N6 1097 aa18.31■□□□□ 0.52
UBA7-208ENST00000488536 TOPAZ1Q8N9V7 1692 aa18.31■□□□□ 0.52
UBA7-208ENST00000488536 CEP170BQ9Y4F5 1589 aaPredicted RBP18.3■□□□□ 0.52
UBA7-208ENST00000488536 IL16Q14005 1332 aa18.29■□□□□ 0.52
UBA7-208ENST00000488536 CDK12Q9NYV4 1490 aaPredicted RBP18.29■□□□□ 0.52
UBA7-208ENST00000488536 FCHSD2O94868 740 aa18.29■□□□□ 0.52
UBA7-208ENST00000488536 CEBPAP49715 358 aaPredicted RBP18.29■□□□□ 0.52
UBA7-208ENST00000488536 AAMPQ13685 434 aa18.29■□□□□ 0.52
UBA7-208ENST00000488536 MAPK8IP3Q9UPT6 1336 aa18.28■□□□□ 0.52
UBA7-208ENST00000488536 EXOC6Q8TAG9 804 aa18.28■□□□□ 0.52
UBA7-208ENST00000488536 SENP3Q9H4L4 574 aaPredicted RBP18.28■□□□□ 0.52
UBA7-208ENST00000488536 ZNF142P52746 1687 aaPredicted RBP18.28■□□□□ 0.52
UBA7-208ENST00000488536 COG3Q96JB2 828 aa18.27■□□□□ 0.52
UBA7-208ENST00000488536 XRN1Q8IZH2 1706 aaKnown RBP18.26■□□□□ 0.51
UBA7-208ENST00000488536 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.26■□□□□ 0.51
UBA7-208ENST00000488536 ANKARQ7Z5J8 1434 aa18.26■□□□□ 0.51
UBA7-208ENST00000488536 PTPRUQ92729 1446 aa18.26■□□□□ 0.51
UBA7-208ENST00000488536 NEFMP07197 916 aa18.26■□□□□ 0.51
UBA7-208ENST00000488536 PLEKHF1Q96S99 279 aa18.26■□□□□ 0.51
UBA7-208ENST00000488536 RIMS1Q86UR5 1692 aaKnown RBP18.25■□□□□ 0.51
UBA7-208ENST00000488536 PDE3AQ14432 1141 aa18.25■□□□□ 0.51
UBA7-208ENST00000488536 AMOTL2Q9Y2J4 779 aa18.25■□□□□ 0.51
UBA7-208ENST00000488536 POLKQ9UBT6 870 aa18.24■□□□□ 0.51
UBA7-208ENST00000488536 RBM19Q9Y4C8 960 aaKnown RBP18.24■□□□□ 0.51
UBA7-208ENST00000488536 NRKQ7Z2Y5 1582 aa18.24■□□□□ 0.51
UBA7-208ENST00000488536 ADAMTSL3P82987 1691 aa18.24■□□□□ 0.51
UBA7-208ENST00000488536 TTC21AQ8NDW8 1320 aa18.23■□□□□ 0.51
UBA7-208ENST00000488536 U2SURPO15042 1029 aaKnown RBP18.23■□□□□ 0.51
UBA7-208ENST00000488536 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.23■□□□□ 0.51
UBA7-208ENST00000488536 PRR36Q9H6K5 1346 aa18.23■□□□□ 0.51
UBA7-208ENST00000488536 CALD1Q05682 793 aaKnown RBP18.22■□□□□ 0.51
UBA7-208ENST00000488536 SPINK5Q9NQ38 1064 aaPredicted RBP18.22■□□□□ 0.51
UBA7-208ENST00000488536 TMPOP42166 694 aaKnown RBP18.21■□□□□ 0.51
UBA7-208ENST00000488536 CRBNQ96SW2 442 aa18.21■□□□□ 0.51
UBA7-208ENST00000488536 USP6P35125 1406 aa18.21■□□□□ 0.51
UBA7-208ENST00000488536 TCERG1O14776 1098 aaKnown RBP18.2■□□□□ 0.5
UBA7-208ENST00000488536 MS4A1P11836 297 aa18.2■□□□□ 0.5
UBA7-208ENST00000488536 ANKLE2Q86XL3 938 aa18.2■□□□□ 0.5
UBA7-208ENST00000488536 SLC26A8Q96RN1 970 aa18.2■□□□□ 0.5
UBA7-208ENST00000488536 TTC21BQ7Z4L5 1316 aa18.2■□□□□ 0.5
UBA7-208ENST00000488536 LRRC7Q96NW7 1537 aa18.19■□□□□ 0.5
UBA7-208ENST00000488536 SSH2Q76I76 1423 aa18.19■□□□□ 0.5
UBA7-208ENST00000488536 FANCIQ9NVI1 1328 aa18.19■□□□□ 0.5
UBA7-208ENST00000488536 OVOS2A0A0J9YW53 1432 aa18.18■□□□□ 0.5
UBA7-208ENST00000488536 OVOS2Q6IE36 1432 aa18.18■□□□□ 0.5
UBA7-208ENST00000488536 NME9Q86XW9 330 aa18.18■□□□□ 0.5
UBA7-208ENST00000488536 ACEP12821 1306 aa18.18■□□□□ 0.5
UBA7-208ENST00000488536 USP31Q70CQ4 1352 aa18.17■□□□□ 0.5
UBA7-208ENST00000488536 SETD1BQ9UPS6 1966 aaKnown RBP18.17■□□□□ 0.5
UBA7-208ENST00000488536 PLIN1O60240 522 aa18.17■□□□□ 0.5
UBA7-208ENST00000488536 LMOD3Q0VAK6 560 aa18.17■□□□□ 0.5
UBA7-208ENST00000488536 CENPQQ7L2Z9 268 aaPredicted RBP18.17■□□□□ 0.5
UBA7-208ENST00000488536 ZNF428Q96B54 188 aa18.17■□□□□ 0.5
UBA7-208ENST00000488536 MAP2P11137 1827 aaKnown RBP18.16■□□□□ 0.5
UBA7-208ENST00000488536 IL13P35225 146 aa18.16■□□□□ 0.5
UBA7-208ENST00000488536 RSPH6AQ9H0K4 717 aa18.16■□□□□ 0.5
UBA7-208ENST00000488536 DMRT2Q9Y5R5 561 aa18.16■□□□□ 0.5
UBA7-208ENST00000488536 NALCNQ8IZF0 1738 aa18.15■□□□□ 0.5
UBA7-208ENST00000488536 RARSP54136 660 aaKnown RBP18.15■□□□□ 0.5
UBA7-208ENST00000488536 NEUROD2Q15784 382 aa18.15■□□□□ 0.5
UBA7-208ENST00000488536 RRP7AQ9Y3A4 280 aaKnown RBP18.15■□□□□ 0.5
UBA7-208ENST00000488536 KIF24Q5T7B8 1368 aa18.14■□□□□ 0.49
UBA7-208ENST00000488536 RIPK4P57078 832 aa18.13■□□□□ 0.49
UBA7-208ENST00000488536 TRIM35Q9UPQ4 493 aa18.13■□□□□ 0.49
UBA7-208ENST00000488536 NFE2L2Q16236 605 aa18.12■□□□□ 0.49
UBA7-208ENST00000488536 FMN2Q9NZ56 1722 aa18.12■□□□□ 0.49
UBA7-208ENST00000488536 CANXP27824 592 aaKnown RBP18.11■□□□□ 0.49
UBA7-208ENST00000488536 USP54Q70EL1 1684 aa18.11■□□□□ 0.49
UBA7-208ENST00000488536 CHD2O14647 1828 aaKnown RBP18.1■□□□□ 0.49
UBA7-208ENST00000488536 KDM2BQ8NHM5 1336 aa18.1■□□□□ 0.49
UBA7-208ENST00000488536 BCAR3O75815 825 aa18.1■□□□□ 0.49
UBA7-208ENST00000488536 PRKAR2BP31323 418 aa18.1■□□□□ 0.49
UBA7-208ENST00000488536 C20orf194Q5TEA3 1177 aa18.1■□□□□ 0.49
UBA7-208ENST00000488536 EMILIN1Q9Y6C2 1016 aa18.1■□□□□ 0.49
UBA7-208ENST00000488536 PPM1GO15355 546 aaPredicted RBP18.09■□□□□ 0.49
UBA7-208ENST00000488536 DNAJC5Q9H3Z4 198 aa18.09■□□□□ 0.49
UBA7-208ENST00000488536 NCKAP5LQ9HCH0 1330 aa18.08■□□□□ 0.49
UBA7-208ENST00000488536 KCNA6P17658 529 aa18.08■□□□□ 0.48
UBA7-208ENST00000488536 ALDH1L2Q3SY69 923 aa18.07■□□□□ 0.48
UBA7-208ENST00000488536 NGDNQ8NEJ9 315 aaKnown RBP18.07■□□□□ 0.48
UBA7-208ENST00000488536 BRPF1P55201 1214 aaPredicted RBP18.06■□□□□ 0.48
UBA7-208ENST00000488536 GNAI1P63096 354 aa18.06■□□□□ 0.48
UBA7-208ENST00000488536 IFT57Q9NWB7 429 aa18.06■□□□□ 0.48
UBA7-208ENST00000488536 NPHP4O75161 1426 aaPredicted RBP18.06■□□□□ 0.48
UBA7-208ENST00000488536 SBNO1A3KN83 1393 aa18.05■□□□□ 0.48
UBA7-208ENST00000488536 HAP1P54257 671 aaPredicted RBP18.05■□□□□ 0.48
UBA7-208ENST00000488536 ZKSCAN2Q63HK3 967 aa18.05■□□□□ 0.48
UBA7-208ENST00000488536 ADGRL3Q9HAR2 1447 aa18.05■□□□□ 0.48
UBA7-208ENST00000488536 ARHGEF10O15013 1369 aa18.04■□□□□ 0.48
UBA7-208ENST00000488536 KIF16BQ96L93 1317 aa18.04■□□□□ 0.48
UBA7-208ENST00000488536 IPO8O15397 1037 aaKnown RBP18.04■□□□□ 0.48
UBA7-208ENST00000488536 PLPPR3Q6T4P5 718 aa18.04■□□□□ 0.48
UBA7-208ENST00000488536 ZRANB1Q9UGI0 708 aa18.04■□□□□ 0.48
UBA7-208ENST00000488536 FLT4P35916 1363 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms