RNA–Protein interactions for RNA: ENST00000488535.2

ABCA2-219, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 3,327 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-219ENST00000488535 STAC3Q96MF2 364 aa16.33■□□□□ 0.2
ABCA2-219ENST00000488535 PLCB2Q00722 1185 aa16.33■□□□□ 0.2
ABCA2-219ENST00000488535 CABP2Q9NPB3 220 aa16.33■□□□□ 0.2
ABCA2-219ENST00000488535 COL17A1Q9UMD9 1497 aaPredicted RBP16.32■□□□□ 0.2
ABCA2-219ENST00000488535 MINK1Q8N4C8 1332 aaPredicted RBP16.32■□□□□ 0.2
ABCA2-219ENST00000488535 U2SURPO15042 1029 aaKnown RBP16.32■□□□□ 0.2
ABCA2-219ENST00000488535 CD2BP2O95400 341 aaKnown RBP16.32■□□□□ 0.2
ABCA2-219ENST00000488535 CALD1Q05682 793 aaKnown RBP16.32■□□□□ 0.2
ABCA2-219ENST00000488535 CCDC173Q0VFZ6 552 aa16.32■□□□□ 0.2
ABCA2-219ENST00000488535 MORC1Q86VD1 984 aa16.32■□□□□ 0.2
ABCA2-219ENST00000488535 C1orf115Q9H7X2 142 aa16.32■□□□□ 0.2
ABCA2-219ENST00000488535 U2AF1L5P0DN76 240 aaPredicted RBP16.32■□□□□ 0.2
ABCA2-219ENST00000488535 RIPK4P57078 832 aa16.32■□□□□ 0.2
ABCA2-219ENST00000488535 U2AF1Q01081 240 aaKnown RBP eCLIP16.32■□□□□ 0.2
ABCA2-219ENST00000488535 BCL11BQ9C0K0 894 aaPredicted RBP16.32■□□□□ 0.2
ABCA2-219ENST00000488535 NEO1Q92859 1461 aa16.32■□□□□ 0.2
ABCA2-219ENST00000488535 DZIP1LQ8IYY4 767 aaKnown RBP16.32■□□□□ 0.2
ABCA2-219ENST00000488535 RBM27Q9P2N5 1060 aaKnown RBP16.32■□□□□ 0.2
ABCA2-219ENST00000488535 TET3O43151 1660 aa16.31■□□□□ 0.2
ABCA2-219ENST00000488535 ANKRD45Q5TZF3 282 aa16.31■□□□□ 0.2
ABCA2-219ENST00000488535 HECW2Q9P2P5 1572 aa16.3■□□□□ 0.2
ABCA2-219ENST00000488535 RIMBP3CA6NJZ7 1639 aa16.3■□□□□ 0.2
ABCA2-219ENST00000488535 RIMBP3BA6NNM3 1639 aa16.3■□□□□ 0.2
ABCA2-219ENST00000488535 RIMBP3Q9UFD9 1639 aa16.3■□□□□ 0.2
ABCA2-219ENST00000488535 SPHKAPQ2M3C7 1700 aa16.3■□□□□ 0.2
ABCA2-219ENST00000488535 ZKSCAN2Q63HK3 967 aa16.3■□□□□ 0.2
ABCA2-219ENST00000488535 NOL8Q76FK4 1167 aaKnown RBP16.3■□□□□ 0.2
ABCA2-219ENST00000488535 C14orf93Q9H972 538 aaKnown RBP16.29■□□□□ 0.2
ABCA2-219ENST00000488535 CEP152O94986 1710 aa16.29■□□□□ 0.2
ABCA2-219ENST00000488535 EFCAB6Q5THR3 1501 aa16.29■□□□□ 0.2
ABCA2-219ENST00000488535 MVPQ14764 893 aaKnown RBP16.28■□□□□ 0.2
ABCA2-219ENST00000488535 PPRC1Q5VV67 1664 aaKnown RBP16.28■□□□□ 0.2
ABCA2-219ENST00000488535 IGSF3O75054 1194 aa16.28■□□□□ 0.2
ABCA2-219ENST00000488535 PRPF40AO75400 957 aaKnown RBP16.28■□□□□ 0.2
ABCA2-219ENST00000488535 OFD1O75665 1012 aa16.27■□□□□ 0.2
ABCA2-219ENST00000488535 SKOR2Q2VWA4 1001 aaPredicted RBP16.27■□□□□ 0.2
ABCA2-219ENST00000488535 SLC52A1Q9NWF4 448 aa16.27■□□□□ 0.2
ABCA2-219ENST00000488535 EIF2AK4Q9P2K8 1649 aaKnown RBP16.27■□□□□ 0.2
ABCA2-219ENST00000488535 MROH1Q8NDA8 1641 aa16.27■□□□□ 0.2
ABCA2-219ENST00000488535 FRMPD1Q5SYB0 1578 aa16.27■□□□□ 0.19
ABCA2-219ENST00000488535 NLRP1Q9C000 1473 aa16.27■□□□□ 0.19
ABCA2-219ENST00000488535 ABCA6Q8N139 1617 aa16.27■□□□□ 0.19
ABCA2-219ENST00000488535 GAS2L2Q8NHY3 880 aa16.27■□□□□ 0.19
ABCA2-219ENST00000488535 CARD14Q9BXL6 1004 aa16.27■□□□□ 0.19
ABCA2-219ENST00000488535 ELL2O00472 640 aaPredicted RBP16.26■□□□□ 0.19
ABCA2-219ENST00000488535 CBX1P83916 185 aa16.26■□□□□ 0.19
ABCA2-219ENST00000488535 TRMT2AQ8IZ69 625 aaKnown RBP16.26■□□□□ 0.19
ABCA2-219ENST00000488535 PRAM1Q96QH2 718 aa16.25■□□□□ 0.19
ABCA2-219ENST00000488535 CEBPAP49715 358 aaPredicted RBP16.25■□□□□ 0.19
ABCA2-219ENST00000488535 EXOSC9Q06265 439 aaKnown RBP16.25■□□□□ 0.19
ABCA2-219ENST00000488535 MAPK8IP2Q13387 824 aaPredicted RBP16.25■□□□□ 0.19
ABCA2-219ENST00000488535 RNF17Q9BXT8 1623 aaKnown RBP16.24■□□□□ 0.19
ABCA2-219ENST00000488535 ABCC3O15438 1527 aa16.24■□□□□ 0.19
ABCA2-219ENST00000488535 MADDQ8WXG6 1647 aa16.24■□□□□ 0.19
ABCA2-219ENST00000488535 PRIM1P49642 420 aaKnown RBP16.24■□□□□ 0.19
ABCA2-219ENST00000488535 DEPDC5O75140 1603 aa16.23■□□□□ 0.19
ABCA2-219ENST00000488535 SYCE3A1L190 88 aa16.23■□□□□ 0.19
ABCA2-219ENST00000488535 NUTM2FA1L443 756 aa16.23■□□□□ 0.19
ABCA2-219ENST00000488535 PKP1Q13835 747 aa16.23■□□□□ 0.19
ABCA2-219ENST00000488535 ZNF830Q96NB3 372 aaPredicted RBP16.23■□□□□ 0.19
ABCA2-219ENST00000488535 ZNF692Q9BU19 519 aaPredicted RBP16.23■□□□□ 0.19
ABCA2-219ENST00000488535 RBSNQ9H1K0 784 aa16.23■□□□□ 0.19
ABCA2-219ENST00000488535 NOB1Q9ULX3 412 aaKnown RBP16.23■□□□□ 0.19
ABCA2-219ENST00000488535 RAB3GAP1Q15042 981 aa16.23■□□□□ 0.19
ABCA2-219ENST00000488535 CFAP74Q9C0B2 1584 aa16.23■□□□□ 0.19
ABCA2-219ENST00000488535 K7ELQ4 463 aaPredicted RBP16.22■□□□□ 0.19
ABCA2-219ENST00000488535 BAG4O95429 457 aaKnown RBP16.22■□□□□ 0.19
ABCA2-219ENST00000488535 TRIM27P14373 513 aa16.22■□□□□ 0.19
ABCA2-219ENST00000488535 WAPLQ7Z5K2 1190 aa16.22■□□□□ 0.19
ABCA2-219ENST00000488535 TMEM57Q8N5G2 664 aa16.22■□□□□ 0.19
ABCA2-219ENST00000488535 VWDEQ8N2E2 1590 aa16.22■□□□□ 0.19
ABCA2-219ENST00000488535 RPGRIP1LQ68CZ1 1315 aa16.22■□□□□ 0.19
ABCA2-219ENST00000488535 MTHFSP49914 203 aa16.22■□□□□ 0.19
ABCA2-219ENST00000488535 PRDM4Q9UKN5 801 aa16.22■□□□□ 0.19
ABCA2-219ENST00000488535 RUNDC1Q96C34 613 aa16.21■□□□□ 0.19
ABCA2-219ENST00000488535 ZSCAN23Q3MJ62 389 aa16.21■□□□□ 0.18
ABCA2-219ENST00000488535 EVC2Q86UK5 1308 aa16.2■□□□□ 0.18
ABCA2-219ENST00000488535 ISY1Q9ULR0 285 aaKnown RBP16.2■□□□□ 0.18
ABCA2-219ENST00000488535 DIP2CQ9Y2E4 1556 aa16.2■□□□□ 0.18
ABCA2-219ENST00000488535 SPDYE4A6NLX3 237 aa16.2■□□□□ 0.18
ABCA2-219ENST00000488535 C17orf53Q8N3J3 647 aaPredicted RBP16.19■□□□□ 0.18
ABCA2-219ENST00000488535 SSH1Q8WYL5 1049 aa16.19■□□□□ 0.18
ABCA2-219ENST00000488535 SLC24A1O60721 1099 aa16.19■□□□□ 0.18
ABCA2-219ENST00000488535 GGNBP2Q9H3C7 697 aa16.19■□□□□ 0.18
ABCA2-219ENST00000488535 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.18■□□□□ 0.18
ABCA2-219ENST00000488535 KIF1BO60333 1816 aa16.18■□□□□ 0.18
ABCA2-219ENST00000488535 DDX19BQ9UMR2 479 aa16.17■□□□□ 0.18
ABCA2-219ENST00000488535 NSD3Q9BZ95 1437 aa16.16■□□□□ 0.18
ABCA2-219ENST00000488535 TXNDC2Q86VQ3 553 aa16.16■□□□□ 0.18
ABCA2-219ENST00000488535 SMC5Q8IY18 1101 aa16.16■□□□□ 0.18
ABCA2-219ENST00000488535 CFAP53Q96M91 514 aa16.16■□□□□ 0.18
ABCA2-219ENST00000488535 CHD1LQ86WJ1 897 aa16.16■□□□□ 0.18
ABCA2-219ENST00000488535 KLHL40Q2TBA0 621 aa16.16■□□□□ 0.18
ABCA2-219ENST00000488535 TBC1D9Q6ZT07 1266 aa16.16■□□□□ 0.18
ABCA2-219ENST00000488535 MAP3K4Q9Y6R4 1608 aa16.15■□□□□ 0.18
ABCA2-219ENST00000488535 ERVK-7P63135 1459 aa16.15■□□□□ 0.18
ABCA2-219ENST00000488535 ZGPATQ8N5A5 531 aaKnown RBP16.15■□□□□ 0.18
ABCA2-219ENST00000488535 MROH2AA6NES4 1674 aa16.15■□□□□ 0.18
ABCA2-219ENST00000488535 AAMPQ13685 434 aa16.14■□□□□ 0.17
ABCA2-219ENST00000488535 PIK3C2GO75747 1445 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms