RNA–Protein interactions for RNA: ENST00000488298.5

COL1A2-210, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-210ENST00000488298 FAM83GA6ND36 823 aa17.39■□□□□ 0.37
COL1A2-210ENST00000488298 ONECUT3O60422 494 aaPredicted RBP17.39■□□□□ 0.37
COL1A2-210ENST00000488298 NBPF8Q3BBV2 869 aa17.39■□□□□ 0.37
COL1A2-210ENST00000488298 HIRIP3Q9BW71 556 aaPredicted RBP17.39■□□□□ 0.37
COL1A2-210ENST00000488298 ANKARQ7Z5J8 1434 aa17.38■□□□□ 0.37
COL1A2-210ENST00000488298 DEFB132Q7Z7B7 95 aa17.38■□□□□ 0.37
COL1A2-210ENST00000488298 KRT27Q7Z3Y8 459 aa17.37■□□□□ 0.37
COL1A2-210ENST00000488298 MINK1Q8N4C8 1332 aaPredicted RBP17.37■□□□□ 0.37
COL1A2-210ENST00000488298 GPRASP1Q5JY77 1395 aa17.36■□□□□ 0.37
COL1A2-210ENST00000488298 A0A0G2JS52 829 aa17.35■□□□□ 0.37
COL1A2-210ENST00000488298 MYT1Q01538 1121 aa17.35■□□□□ 0.37
COL1A2-210ENST00000488298 WASLO00401 505 aaPredicted RBP17.34■□□□□ 0.37
COL1A2-210ENST00000488298 EIF3AQ14152 1382 aaKnown RBP17.34■□□□□ 0.37
COL1A2-210ENST00000488298 BTG4Q9NY30 223 aa17.34■□□□□ 0.37
COL1A2-210ENST00000488298 PRR36Q9H6K5 1346 aa17.33■□□□□ 0.36
COL1A2-210ENST00000488298 NGDNQ8NEJ9 315 aaKnown RBP17.33■□□□□ 0.36
COL1A2-210ENST00000488298 NWD2Q9ULI1 1742 aa17.33■□□□□ 0.36
COL1A2-210ENST00000488298 QRICH2Q9H0J4 1663 aa17.32■□□□□ 0.36
COL1A2-210ENST00000488298 EP400Q96L91 3159 aa17.32■□□□□ 0.36
COL1A2-210ENST00000488298 CLSPNQ9HAW4 1339 aa17.32■□□□□ 0.36
COL1A2-210ENST00000488298 FAM98CQ17RN3 349 aaKnown RBP17.32■□□□□ 0.36
COL1A2-210ENST00000488298 BRWD3Q6RI45 1802 aa17.32■□□□□ 0.36
COL1A2-210ENST00000488298 PAK3O75914 559 aaPredicted RBP17.31■□□□□ 0.36
COL1A2-210ENST00000488298 TULP4Q9NRJ4 1543 aa17.31■□□□□ 0.36
COL1A2-210ENST00000488298 TONSLQ96HA7 1378 aa17.3■□□□□ 0.36
COL1A2-210ENST00000488298 PLCH1Q4KWH8 1693 aa17.3■□□□□ 0.36
COL1A2-210ENST00000488298 TOPAZ1Q8N9V7 1692 aa17.29■□□□□ 0.36
COL1A2-210ENST00000488298 BAG6P46379 1132 aa17.29■□□□□ 0.36
COL1A2-210ENST00000488298 ABCA3Q99758 1704 aa17.28■□□□□ 0.36
COL1A2-210ENST00000488298 SRCAPQ6ZRS2 3230 aa17.28■□□□□ 0.36
COL1A2-210ENST00000488298 ATP7BP35670 1465 aa17.28■□□□□ 0.36
COL1A2-210ENST00000488298 NUDT16Q96DE0 195 aaKnown RBP17.27■□□□□ 0.36
COL1A2-210ENST00000488298 PRDM11Q9NQV5 511 aa17.27■□□□□ 0.36
COL1A2-210ENST00000488298 ITSN1Q15811 1721 aa17.27■□□□□ 0.35
COL1A2-210ENST00000488298 TRPM3Q9HCF6 1732 aaPredicted RBP17.26■□□□□ 0.35
COL1A2-210ENST00000488298 ROCK2O75116 1388 aaKnown RBP17.26■□□□□ 0.35
COL1A2-210ENST00000488298 SPATA31A5Q5VU36 1347 aa17.25■□□□□ 0.35
COL1A2-210ENST00000488298 SPATA31A7Q8IWB4 1347 aa17.25■□□□□ 0.35
COL1A2-210ENST00000488298 CENPJQ9HC77 1338 aaPredicted RBP17.24■□□□□ 0.35
COL1A2-210ENST00000488298 ALS2Q96Q42 1657 aa17.24■□□□□ 0.35
COL1A2-210ENST00000488298 COL14A1Q05707 1796 aaKnown RBP17.24■□□□□ 0.35
COL1A2-210ENST00000488298 FAM182BQ5T319 152 aa17.23■□□□□ 0.35
COL1A2-210ENST00000488298 CDK19Q9BWU1 502 aa17.23■□□□□ 0.35
COL1A2-210ENST00000488298 TIMELESSQ9UNS1 1208 aa17.23■□□□□ 0.35
COL1A2-210ENST00000488298 NRAPQ86VF7 1730 aa17.22■□□□□ 0.35
COL1A2-210ENST00000488298 EN1Q05925 392 aaPredicted RBP17.22■□□□□ 0.35
COL1A2-210ENST00000488298 CHRNA2Q15822 529 aa17.22■□□□□ 0.35
COL1A2-210ENST00000488298 PSDA5PKW4 1024 aaPredicted RBP17.21■□□□□ 0.35
COL1A2-210ENST00000488298 ZC3H6P61129 1189 aaKnown RBP17.21■□□□□ 0.35
COL1A2-210ENST00000488298 STRN4Q9NRL3 753 aa17.21■□□□□ 0.35
COL1A2-210ENST00000488298 KIAA0232Q92628 1395 aa17.2■□□□□ 0.34
COL1A2-210ENST00000488298 SBNO2Q9Y2G9 1366 aa17.2■□□□□ 0.34
COL1A2-210ENST00000488298 NUTM2GQ5VZR2 741 aa17.2■□□□□ 0.34
COL1A2-210ENST00000488298 CCDC61Q9Y6R9 512 aa17.2■□□□□ 0.34
COL1A2-210ENST00000488298 ACEP12821 1306 aa17.19■□□□□ 0.34
COL1A2-210ENST00000488298 SPATA31A1Q5TZJ5 1347 aa17.19■□□□□ 0.34
COL1A2-210ENST00000488298 EVA1CP58658 441 aa17.18■□□□□ 0.34
COL1A2-210ENST00000488298 CRYBG1Q9Y4K1 1723 aa17.18■□□□□ 0.34
COL1A2-210ENST00000488298 POLR3AO14802 1390 aaPredicted RBP17.17■□□□□ 0.34
COL1A2-210ENST00000488298 PLEKHG3A1L390 1219 aa17.17■□□□□ 0.34
COL1A2-210ENST00000488298 FAM196AQ6ZSG2 479 aa17.16■□□□□ 0.34
COL1A2-210ENST00000488298 ABTB2Q8N961 1025 aa17.16■□□□□ 0.34
COL1A2-210ENST00000488298 CARD11Q9BXL7 1154 aa17.16■□□□□ 0.34
COL1A2-210ENST00000488298 USP35Q9P2H5 1018 aa17.16■□□□□ 0.34
COL1A2-210ENST00000488298 EZH2Q15910 746 aaKnown RBP17.15■□□□□ 0.34
COL1A2-210ENST00000488298 TRIM37O94972 964 aa17.14■□□□□ 0.33
COL1A2-210ENST00000488298 R3HDM1Q15032 1099 aaKnown RBP17.14■□□□□ 0.33
COL1A2-210ENST00000488298 PDE3BQ13370 1112 aa17.13■□□□□ 0.33
COL1A2-210ENST00000488298 BARGINQ6ZT62 677 aa17.13■□□□□ 0.33
COL1A2-210ENST00000488298 CCER1Q8TC90 406 aaPredicted RBP17.13■□□□□ 0.33
COL1A2-210ENST00000488298 THSD7AQ9UPZ6 1657 aa17.13■□□□□ 0.33
COL1A2-210ENST00000488298 AKAP12Q02952 1782 aa17.12■□□□□ 0.33
COL1A2-210ENST00000488298 SRPK2P78362 688 aaKnown RBP17.12■□□□□ 0.33
COL1A2-210ENST00000488298 TESK2Q96S53 571 aa17.12■□□□□ 0.33
COL1A2-210ENST00000488298 CABP2Q9NPB3 220 aa17.12■□□□□ 0.33
COL1A2-210ENST00000488298 RGPD1P0DJD0 1748 aa17.12■□□□□ 0.33
COL1A2-210ENST00000488298 DISP2A7MBM2 1401 aa17.12■□□□□ 0.33
COL1A2-210ENST00000488298 LRP5O75197 1615 aa17.11■□□□□ 0.33
COL1A2-210ENST00000488298 APBA3O96018 575 aa17.11■□□□□ 0.33
COL1A2-210ENST00000488298 LARP1Q6PKG0 1096 aaKnown RBP17.11■□□□□ 0.33
COL1A2-210ENST00000488298 NLRP13Q86W25 1043 aa17.11■□□□□ 0.33
COL1A2-210ENST00000488298 CAMKK2Q96RR4 588 aa17.11■□□□□ 0.33
COL1A2-210ENST00000488298 PPIP5K1Q6PFW1 1433 aa17.11■□□□□ 0.33
COL1A2-210ENST00000488298 GCP02774 474 aa17.1■□□□□ 0.33
COL1A2-210ENST00000488298 TCP11L2Q8N4U5 519 aa17.1■□□□□ 0.33
COL1A2-210ENST00000488298 EVC2Q86UK5 1308 aa17.1■□□□□ 0.33
COL1A2-210ENST00000488298 SSH2Q76I76 1423 aa17.1■□□□□ 0.33
COL1A2-210ENST00000488298 PHRF1Q9P1Y6 1649 aaKnown RBP17.09■□□□□ 0.33
COL1A2-210ENST00000488298 CPDO75976 1380 aa17.08■□□□□ 0.32
COL1A2-210ENST00000488298 USP19O94966 1318 aa17.08■□□□□ 0.32
COL1A2-210ENST00000488298 THRAP3Q9Y2W1 955 aaKnown RBP17.08■□□□□ 0.32
COL1A2-210ENST00000488298 NRKQ7Z2Y5 1582 aa17.07■□□□□ 0.32
COL1A2-210ENST00000488298 ST20-MTHFSA0A0A6YYL1 179 aa17.07■□□□□ 0.32
COL1A2-210ENST00000488298 CAMTA1Q9Y6Y1 1673 aa17.07■□□□□ 0.32
COL1A2-210ENST00000488298 CD163L1Q9NR16 1453 aa17.06■□□□□ 0.32
COL1A2-210ENST00000488298 CABP1Q9NZU7 370 aa17.06■□□□□ 0.32
COL1A2-210ENST00000488298 MON2Q7Z3U7 1717 aa17.06■□□□□ 0.32
COL1A2-210ENST00000488298 CPSF1Q10570 1443 aaKnown RBP17.05■□□□□ 0.32
COL1A2-210ENST00000488298 PARD3Q8TEW0 1356 aa17.05■□□□□ 0.32
COL1A2-210ENST00000488298 USP47Q96K76 1375 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms