RNA–Protein interactions for RNA: ENST00000488061.5

PDE6B-211, Transcript of phosphodiesterase 6B, humanhuman

TSL 5

Gene PDE6B, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-211ENST00000488061 CCDC125Q86Z20 511 aa25.51■■□□□ 1.67
PDE6B-211ENST00000488061 NGDNQ8NEJ9 315 aaKnown RBP25.5■■□□□ 1.67
PDE6B-211ENST00000488061 EVC2Q86UK5 1308 aa25.49■■□□□ 1.67
PDE6B-211ENST00000488061 CARD11Q9BXL7 1154 aa25.49■■□□□ 1.67
PDE6B-211ENST00000488061 BRD4O60885 1362 aaPredicted RBP25.47■■□□□ 1.67
PDE6B-211ENST00000488061 GJD4Q96KN9 370 aaPredicted RBP25.47■■□□□ 1.67
PDE6B-211ENST00000488061 SRPK2P78362 688 aaKnown RBP25.46■■□□□ 1.67
PDE6B-211ENST00000488061 ABCA3Q99758 1704 aa25.46■■□□□ 1.67
PDE6B-211ENST00000488061 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.45■■□□□ 1.66
PDE6B-211ENST00000488061 GLI3P10071 1580 aa25.44■■□□□ 1.66
PDE6B-211ENST00000488061 SLC24A1O60721 1099 aa25.43■■□□□ 1.66
PDE6B-211ENST00000488061 PPIP5K1Q6PFW1 1433 aa25.43■■□□□ 1.66
PDE6B-211ENST00000488061 ACEP12821 1306 aa25.42■■□□□ 1.66
PDE6B-211ENST00000488061 BLMP54132 1417 aaPredicted RBP25.41■■□□□ 1.66
PDE6B-211ENST00000488061 CABP2Q9NPB3 220 aa25.4■■□□□ 1.66
PDE6B-211ENST00000488061 CRYBG1Q9Y4K1 1723 aa25.4■■□□□ 1.66
PDE6B-211ENST00000488061 BRWD3Q6RI45 1802 aa25.4■■□□□ 1.66
PDE6B-211ENST00000488061 SLIT2O94813 1529 aa25.39■■□□□ 1.66
PDE6B-211ENST00000488061 PUS7Q96PZ0 661 aaKnown RBP25.38■■□□□ 1.65
PDE6B-211ENST00000488061 NWD2Q9ULI1 1742 aa25.37■■□□□ 1.65
PDE6B-211ENST00000488061 LMOD2Q6P5Q4 547 aa25.37■■□□□ 1.65
PDE6B-211ENST00000488061 DEFB132Q7Z7B7 95 aa25.37■■□□□ 1.65
PDE6B-211ENST00000488061 HAP1P54257 671 aaPredicted RBP25.36■■□□□ 1.65
PDE6B-211ENST00000488061 UNC5CLQ8IV45 518 aa25.36■■□□□ 1.65
PDE6B-211ENST00000488061 PAK3O75914 559 aaPredicted RBP25.33■■□□□ 1.65
PDE6B-211ENST00000488061 ZNF692Q9BU19 519 aaPredicted RBP25.33■■□□□ 1.65
PDE6B-211ENST00000488061 CABP1Q9NZU7 370 aa25.33■■□□□ 1.65
PDE6B-211ENST00000488061 LRP5O75197 1615 aa25.33■■□□□ 1.65
PDE6B-211ENST00000488061 USP6P35125 1406 aa25.32■■□□□ 1.64
PDE6B-211ENST00000488061 AKAP12Q02952 1782 aa25.32■■□□□ 1.64
PDE6B-211ENST00000488061 CABLES1Q8TDN4 633 aa25.31■■□□□ 1.64
PDE6B-211ENST00000488061 PLCH1Q4KWH8 1693 aa25.31■■□□□ 1.64
PDE6B-211ENST00000488061 PHRF1Q9P1Y6 1649 aaKnown RBP25.3■■□□□ 1.64
PDE6B-211ENST00000488061 CCER1Q8TC90 406 aaPredicted RBP25.3■■□□□ 1.64
PDE6B-211ENST00000488061 COL14A1Q05707 1796 aaKnown RBP25.3■■□□□ 1.64
PDE6B-211ENST00000488061 SSH2Q76I76 1423 aa25.29■■□□□ 1.64
PDE6B-211ENST00000488061 CPSF1Q10570 1443 aaKnown RBP25.29■■□□□ 1.64
PDE6B-211ENST00000488061 SEPT12Q8IYM1 358 aa25.27■■□□□ 1.64
PDE6B-211ENST00000488061 TESK2Q96S53 571 aa25.27■■□□□ 1.64
PDE6B-211ENST00000488061 ABTB2Q8N961 1025 aa25.26■■□□□ 1.63
PDE6B-211ENST00000488061 USP19O94966 1318 aa25.26■■□□□ 1.63
PDE6B-211ENST00000488061 ST20-MTHFSA0A0A6YYL1 179 aa25.25■■□□□ 1.63
PDE6B-211ENST00000488061 NLRP13Q86W25 1043 aa25.25■■□□□ 1.63
PDE6B-211ENST00000488061 NINLQ9Y2I6 1382 aa25.25■■□□□ 1.63
PDE6B-211ENST00000488061 MON2Q7Z3U7 1717 aa25.24■■□□□ 1.63
PDE6B-211ENST00000488061 USP47Q96K76 1375 aa25.24■■□□□ 1.63
PDE6B-211ENST00000488061 NRAPQ86VF7 1730 aa25.23■■□□□ 1.63
PDE6B-211ENST00000488061 NRKQ7Z2Y5 1582 aa25.23■■□□□ 1.63
PDE6B-211ENST00000488061 SF3B2Q13435 895 aaKnown RBP25.23■■□□□ 1.63
PDE6B-211ENST00000488061 VPS72Q15906 364 aa25.23■■□□□ 1.63
PDE6B-211ENST00000488061 TTC21AQ8NDW8 1320 aa25.22■■□□□ 1.63
PDE6B-211ENST00000488061 FAM83GA6ND36 823 aa25.22■■□□□ 1.63
PDE6B-211ENST00000488061 ONECUT3O60422 494 aaPredicted RBP25.21■■□□□ 1.63
PDE6B-211ENST00000488061 CPDO75976 1380 aa25.2■■□□□ 1.63
PDE6B-211ENST00000488061 PIK3C2AO00443 1686 aa25.2■■□□□ 1.62
PDE6B-211ENST00000488061 SLIT3O75094 1523 aa25.19■■□□□ 1.62
PDE6B-211ENST00000488061 CD163L1Q9NR16 1453 aa25.18■■□□□ 1.62
PDE6B-211ENST00000488061 PSDA5PKW4 1024 aaPredicted RBP25.18■■□□□ 1.62
PDE6B-211ENST00000488061 KRT27Q7Z3Y8 459 aa25.18■■□□□ 1.62
PDE6B-211ENST00000488061 KTN1Q86UP2 1357 aaKnown RBP25.18■■□□□ 1.62
PDE6B-211ENST00000488061 TTC21BQ7Z4L5 1316 aa25.17■■□□□ 1.62
PDE6B-211ENST00000488061 PRDM11Q9NQV5 511 aa25.17■■□□□ 1.62
PDE6B-211ENST00000488061 KIAA0232Q92628 1395 aa25.17■■□□□ 1.62
PDE6B-211ENST00000488061 USP54Q70EL1 1684 aa25.17■■□□□ 1.62
PDE6B-211ENST00000488061 TMF1P82094 1093 aa25.16■■□□□ 1.62
PDE6B-211ENST00000488061 CDCA8Q53HL2 280 aa25.15■■□□□ 1.62
PDE6B-211ENST00000488061 HDGFL2Q7Z4V5 671 aaPredicted RBP25.15■■□□□ 1.62
PDE6B-211ENST00000488061 BTG4Q9NY30 223 aa25.15■■□□□ 1.62
PDE6B-211ENST00000488061 TERF2IPQ9NYB0 399 aa25.15■■□□□ 1.62
PDE6B-211ENST00000488061 PLEKHG5O94827 1062 aa25.14■■□□□ 1.62
PDE6B-211ENST00000488061 GCP02774 474 aa25.14■■□□□ 1.62
PDE6B-211ENST00000488061 NLRP6P59044 892 aa25.14■■□□□ 1.62
PDE6B-211ENST00000488061 CCDC9Q9Y3X0 531 aaKnown RBP25.14■■□□□ 1.62
PDE6B-211ENST00000488061 NUTM2GQ5VZR2 741 aa25.13■■□□□ 1.61
PDE6B-211ENST00000488061 LMO7Q8WWI1 1683 aa25.13■■□□□ 1.61
PDE6B-211ENST00000488061 EDC4Q6P2E9 1401 aaKnown RBP25.12■■□□□ 1.61
PDE6B-211ENST00000488061 USP31Q70CQ4 1352 aa25.11■■□□□ 1.61
PDE6B-211ENST00000488061 KCNH5Q8NCM2 988 aa25.11■■□□□ 1.61
PDE6B-211ENST00000488061 TMC1Q8TDI8 760 aa25.11■■□□□ 1.61
PDE6B-211ENST00000488061 BAG6P46379 1132 aa25.1■■□□□ 1.61
PDE6B-211ENST00000488061 SLC12A5Q9H2X9 1139 aa25.1■■□□□ 1.61
PDE6B-211ENST00000488061 ZC3H6P61129 1189 aaKnown RBP25.09■■□□□ 1.61
PDE6B-211ENST00000488061 A0A1W2PP64 1363 aa25.08■■□□□ 1.61
PDE6B-211ENST00000488061 ABCC6O95255 1503 aa25.07■■□□□ 1.6
PDE6B-211ENST00000488061 AATKQ6ZMQ8 1374 aa25.06■■□□□ 1.6
PDE6B-211ENST00000488061 SPATA31A5Q5VU36 1347 aa25.06■■□□□ 1.6
PDE6B-211ENST00000488061 SPATA31A7Q8IWB4 1347 aa25.06■■□□□ 1.6
PDE6B-211ENST00000488061 ANKRD36BQ8N2N9 1353 aa25.05■■□□□ 1.6
PDE6B-211ENST00000488061 CAMTA1Q9Y6Y1 1673 aa25.05■■□□□ 1.6
PDE6B-211ENST00000488061 A0A0G2JS52 829 aa25.05■■□□□ 1.6
PDE6B-211ENST00000488061 MYT1Q01538 1121 aa25.05■■□□□ 1.6
PDE6B-211ENST00000488061 FAM98CQ17RN3 349 aaKnown RBP25.05■■□□□ 1.6
PDE6B-211ENST00000488061 RGPD1P0DJD0 1748 aa25.05■■□□□ 1.6
PDE6B-211ENST00000488061 EN1Q05925 392 aaPredicted RBP25.04■■□□□ 1.6
PDE6B-211ENST00000488061 CHRNA2Q15822 529 aa25.03■■□□□ 1.6
PDE6B-211ENST00000488061 COL18A1P39060 1754 aa25.03■■□□□ 1.6
PDE6B-211ENST00000488061 NFAT5O94916 1531 aa25.02■■□□□ 1.6
PDE6B-211ENST00000488061 EIF4G2P78344 907 aaKnown RBP eCLIP25.02■■□□□ 1.6
PDE6B-211ENST00000488061 FAM182BQ5T319 152 aa25.01■■□□□ 1.59
PDE6B-211ENST00000488061 SPATA31A1Q5TZJ5 1347 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms