RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 CARD14Q9BXL6 1004 aa14.4□□□□□ -0.1
HLA-DMB-261ENST00000487996 PHF8Q9UPP1 1060 aa14.4□□□□□ -0.1
HLA-DMB-261ENST00000487996 ACEP12821 1306 aa14.4□□□□□ -0.1
HLA-DMB-261ENST00000487996 MON2Q7Z3U7 1717 aa14.4□□□□□ -0.1
HLA-DMB-261ENST00000487996 BRD4O60885 1362 aaPredicted RBP14.39□□□□□ -0.11
HLA-DMB-261ENST00000487996 RALBP1Q15311 655 aa14.38□□□□□ -0.11
HLA-DMB-261ENST00000487996 USP6P35125 1406 aa14.38□□□□□ -0.11
HLA-DMB-261ENST00000487996 AMER1Q5JTC6 1135 aaPredicted RBP14.38□□□□□ -0.11
HLA-DMB-261ENST00000487996 PMFBP1Q8TBY8 1022 aa14.38□□□□□ -0.11
HLA-DMB-261ENST00000487996 PRKRIP1Q9H875 184 aaPredicted RBP14.38□□□□□ -0.11
HLA-DMB-261ENST00000487996 CACNB1Q02641 598 aaPredicted RBP14.36□□□□□ -0.11
HLA-DMB-261ENST00000487996 SLAIN2Q9P270 581 aa14.35□□□□□ -0.11
HLA-DMB-261ENST00000487996 TTC21AQ8NDW8 1320 aa14.35□□□□□ -0.11
HLA-DMB-261ENST00000487996 CC2D1BQ5T0F9 858 aaKnown RBP14.35□□□□□ -0.11
HLA-DMB-261ENST00000487996 MIER1Q8N108 512 aa14.35□□□□□ -0.11
HLA-DMB-261ENST00000487996 KIF20BQ96Q89 1820 aa14.35□□□□□ -0.11
HLA-DMB-261ENST00000487996 PARD3Q8TEW0 1356 aa14.34□□□□□ -0.11
HLA-DMB-261ENST00000487996 NRKQ7Z2Y5 1582 aa14.34□□□□□ -0.11
HLA-DMB-261ENST00000487996 ORAI2Q96SN7 254 aa14.34□□□□□ -0.11
HLA-DMB-261ENST00000487996 PSME1Q06323 249 aa14.33□□□□□ -0.12
HLA-DMB-261ENST00000487996 NPHP3Q7Z494 1330 aa14.33□□□□□ -0.12
HLA-DMB-261ENST00000487996 PIP4K2BP78356 416 aa14.32□□□□□ -0.12
HLA-DMB-261ENST00000487996 TTC21BQ7Z4L5 1316 aa14.32□□□□□ -0.12
HLA-DMB-261ENST00000487996 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.32□□□□□ -0.12
HLA-DMB-261ENST00000487996 ANKRD26Q9UPS8 1709 aa14.32□□□□□ -0.12
HLA-DMB-261ENST00000487996 SSH2Q76I76 1423 aa14.32□□□□□ -0.12
HLA-DMB-261ENST00000487996 MYBBP1AQ9BQG0 1328 aaKnown RBP14.32□□□□□ -0.12
HLA-DMB-261ENST00000487996 CCER2I3L3R5 266 aa14.32□□□□□ -0.12
HLA-DMB-261ENST00000487996 FYB1O15117 783 aa14.31□□□□□ -0.12
HLA-DMB-261ENST00000487996 FOXO3O43524 673 aa14.31□□□□□ -0.12
HLA-DMB-261ENST00000487996 CNGB1Q14028 1251 aaPredicted RBP14.31□□□□□ -0.12
HLA-DMB-261ENST00000487996 MORC1Q86VD1 984 aa14.31□□□□□ -0.12
HLA-DMB-261ENST00000487996 SOCS7O14512 581 aa14.3□□□□□ -0.12
HLA-DMB-261ENST00000487996 TOM1O60784 492 aa14.3□□□□□ -0.12
HLA-DMB-261ENST00000487996 BRINP3Q76B58 766 aa14.29□□□□□ -0.12
HLA-DMB-261ENST00000487996 COG3Q96JB2 828 aa14.29□□□□□ -0.12
HLA-DMB-261ENST00000487996 HSPA1LP34931 641 aa14.29□□□□□ -0.12
HLA-DMB-261ENST00000487996 PAK3O75914 559 aaPredicted RBP14.28□□□□□ -0.12
HLA-DMB-261ENST00000487996 NLRP13Q86W25 1043 aa14.28□□□□□ -0.12
HLA-DMB-261ENST00000487996 GGNBP2Q9H3C7 697 aa14.28□□□□□ -0.12
HLA-DMB-261ENST00000487996 KRT28Q7Z3Y7 464 aa14.27□□□□□ -0.12
HLA-DMB-261ENST00000487996 NME9Q86XW9 330 aa14.27□□□□□ -0.12
HLA-DMB-261ENST00000487996 USP31Q70CQ4 1352 aa14.27□□□□□ -0.13
HLA-DMB-261ENST00000487996 SBNO1A3KN83 1393 aa14.26□□□□□ -0.13
HLA-DMB-261ENST00000487996 OVOS2A0A0J9YW53 1432 aa14.26□□□□□ -0.13
HLA-DMB-261ENST00000487996 OVOS2Q6IE36 1432 aa14.26□□□□□ -0.13
HLA-DMB-261ENST00000487996 ABTB2Q8N961 1025 aa14.26□□□□□ -0.13
HLA-DMB-261ENST00000487996 TRPM3Q9HCF6 1732 aaPredicted RBP14.25□□□□□ -0.13
HLA-DMB-261ENST00000487996 PIK3C2AO00443 1686 aa14.25□□□□□ -0.13
HLA-DMB-261ENST00000487996 USP54Q70EL1 1684 aa14.25□□□□□ -0.13
HLA-DMB-261ENST00000487996 NHSL1Q5SYE7 1610 aa14.24□□□□□ -0.13
HLA-DMB-261ENST00000487996 PPP2R1AP30153 589 aa14.24□□□□□ -0.13
HLA-DMB-261ENST00000487996 PXDNQ92626 1479 aa14.24□□□□□ -0.13
HLA-DMB-261ENST00000487996 ROBO1Q9Y6N7 1651 aa14.24□□□□□ -0.13
HLA-DMB-261ENST00000487996 NLRP6P59044 892 aa14.24□□□□□ -0.13
HLA-DMB-261ENST00000487996 ARHGEF10O15013 1369 aa14.24□□□□□ -0.13
HLA-DMB-261ENST00000487996 AATKQ6ZMQ8 1374 aa14.24□□□□□ -0.13
HLA-DMB-261ENST00000487996 XPCQ01831 940 aaPredicted RBP14.23□□□□□ -0.13
HLA-DMB-261ENST00000487996 MRS2Q9HD23 443 aa14.23□□□□□ -0.13
HLA-DMB-261ENST00000487996 TNS3Q68CZ2 1445 aa14.23□□□□□ -0.13
HLA-DMB-261ENST00000487996 SOS2Q07890 1332 aaPredicted RBP14.22□□□□□ -0.13
HLA-DMB-261ENST00000487996 AHDC1Q5TGY3 1603 aaPredicted RBP14.22□□□□□ -0.13
HLA-DMB-261ENST00000487996 ALS2Q96Q42 1657 aa14.22□□□□□ -0.13
HLA-DMB-261ENST00000487996 TNNT2P45379 298 aaPredicted RBP14.21□□□□□ -0.13
HLA-DMB-261ENST00000487996 LMOD2Q6P5Q4 547 aa14.21□□□□□ -0.14
HLA-DMB-261ENST00000487996 KCNH5Q8NCM2 988 aa14.21□□□□□ -0.14
HLA-DMB-261ENST00000487996 CFAP53Q96M91 514 aa14.21□□□□□ -0.14
HLA-DMB-261ENST00000487996 SPATA31A3Q5VYP0 1347 aa14.2□□□□□ -0.14
HLA-DMB-261ENST00000487996 C1QBPQ07021 282 aaKnown RBP14.2□□□□□ -0.14
HLA-DMB-261ENST00000487996 MED1Q15648 1581 aaPredicted RBP14.2□□□□□ -0.14
HLA-DMB-261ENST00000487996 DDX17Q92841 729 aaKnown RBP14.19□□□□□ -0.14
HLA-DMB-261ENST00000487996 ZRANB1Q9UGI0 708 aa14.19□□□□□ -0.14
HLA-DMB-261ENST00000487996 MAP2P11137 1827 aaKnown RBP14.18□□□□□ -0.14
HLA-DMB-261ENST00000487996 MTHFSP49914 203 aa14.18□□□□□ -0.14
HLA-DMB-261ENST00000487996 LRRC59Q96AG4 307 aaKnown RBP14.18□□□□□ -0.14
HLA-DMB-261ENST00000487996 USP19O94966 1318 aa14.18□□□□□ -0.14
HLA-DMB-261ENST00000487996 SMG6Q86US8 1419 aaKnown RBP14.17□□□□□ -0.14
HLA-DMB-261ENST00000487996 MARF1Q9Y4F3 1742 aaKnown RBP14.17□□□□□ -0.14
HLA-DMB-261ENST00000487996 NUTM2GQ5VZR2 741 aa14.17□□□□□ -0.14
HLA-DMB-261ENST00000487996 KIF24Q5T7B8 1368 aa14.17□□□□□ -0.14
HLA-DMB-261ENST00000487996 SLIT3O75094 1523 aa14.16□□□□□ -0.14
HLA-DMB-261ENST00000487996 CDK12Q9NYV4 1490 aaPredicted RBP14.16□□□□□ -0.14
HLA-DMB-261ENST00000487996 PHLPP1O60346 1717 aa14.16□□□□□ -0.14
HLA-DMB-261ENST00000487996 POLKQ9UBT6 870 aa14.15□□□□□ -0.14
HLA-DMB-261ENST00000487996 GCP02774 474 aa14.14□□□□□ -0.15
HLA-DMB-261ENST00000487996 INSRP06213 1382 aa14.14□□□□□ -0.15
HLA-DMB-261ENST00000487996 NFAT5O94916 1531 aa14.13□□□□□ -0.15
HLA-DMB-261ENST00000487996 RTL1A6NKG5 1358 aa14.13□□□□□ -0.15
HLA-DMB-261ENST00000487996 PNPLA6Q8IY17 1366 aa14.13□□□□□ -0.15
HLA-DMB-261ENST00000487996 PPM1GO15355 546 aaPredicted RBP14.13□□□□□ -0.15
HLA-DMB-261ENST00000487996 SOX12O15370 315 aa14.13□□□□□ -0.15
HLA-DMB-261ENST00000487996 WDR43Q15061 677 aaKnown RBP eCLIP14.13□□□□□ -0.15
HLA-DMB-261ENST00000487996 CCDC184Q52MB2 194 aa14.13□□□□□ -0.15
HLA-DMB-261ENST00000487996 FLT4P35916 1363 aa14.13□□□□□ -0.15
HLA-DMB-261ENST00000487996 RRS1Q15050 365 aaKnown RBP14.12□□□□□ -0.15
HLA-DMB-261ENST00000487996 PNISRQ8TF01 805 aaKnown RBP14.12□□□□□ -0.15
HLA-DMB-261ENST00000487996 NUDCQ9Y266 331 aa14.12□□□□□ -0.15
HLA-DMB-261ENST00000487996 COL16A1Q07092 1604 aaPredicted RBP14.12□□□□□ -0.15
HLA-DMB-261ENST00000487996 PHRF1Q9P1Y6 1649 aaKnown RBP14.12□□□□□ -0.15
HLA-DMB-261ENST00000487996 MAP3K19Q56UN5 1328 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms