RNA–Protein interactions for RNA: ENST00000487803.5

SMIM7-209, Transcript of small integral membrane protein 7, humanhuman

TSL 1 (best)

Gene SMIM7, Length 2,190 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-209ENST00000487803 HDGFL2Q7Z4V5 671 aaPredicted RBP13.31□□□□□ -0.28
SMIM7-209ENST00000487803 GGNBP2Q9H3C7 697 aa13.31□□□□□ -0.28
SMIM7-209ENST00000487803 PLEKHG1Q9ULL1 1385 aa13.31□□□□□ -0.28
SMIM7-209ENST00000487803 CPS1P31327 1500 aa13.3□□□□□ -0.28
SMIM7-209ENST00000487803 TECPR2O15040 1411 aa13.3□□□□□ -0.28
SMIM7-209ENST00000487803 FAM135BQ49AJ0 1406 aa13.3□□□□□ -0.28
SMIM7-209ENST00000487803 RARSP54136 660 aaKnown RBP13.3□□□□□ -0.28
SMIM7-209ENST00000487803 CDK19Q9BWU1 502 aa13.3□□□□□ -0.28
SMIM7-209ENST00000487803 METP08581 1390 aa13.3□□□□□ -0.28
SMIM7-209ENST00000487803 MYH16Q9H6N6 1097 aa13.3□□□□□ -0.28
SMIM7-209ENST00000487803 RIMS1Q86UR5 1692 aaKnown RBP13.29□□□□□ -0.28
SMIM7-209ENST00000487803 ATP7BP35670 1465 aa13.29□□□□□ -0.28
SMIM7-209ENST00000487803 CANXP27824 592 aaKnown RBP13.29□□□□□ -0.28
SMIM7-209ENST00000487803 THEMISQ8N1K5 641 aaPredicted RBP13.29□□□□□ -0.28
SMIM7-209ENST00000487803 ARHGAP23Q9P227 1491 aa13.29□□□□□ -0.28
SMIM7-209ENST00000487803 AAMPQ13685 434 aa13.28□□□□□ -0.28
SMIM7-209ENST00000487803 NPM2Q86SE8 214 aaKnown RBP13.28□□□□□ -0.28
SMIM7-209ENST00000487803 TXNDC2Q86VQ3 553 aa13.28□□□□□ -0.28
SMIM7-209ENST00000487803 PLEKHF1Q96S99 279 aa13.28□□□□□ -0.28
SMIM7-209ENST00000487803 PNPLA6Q8IY17 1366 aa13.28□□□□□ -0.28
SMIM7-209ENST00000487803 SETD1BQ9UPS6 1966 aaKnown RBP13.27□□□□□ -0.28
SMIM7-209ENST00000487803 CLUAP1Q96AJ1 413 aa13.27□□□□□ -0.28
SMIM7-209ENST00000487803 WAPLQ7Z5K2 1190 aa13.27□□□□□ -0.29
SMIM7-209ENST00000487803 CABP1Q9NZU7 370 aa13.27□□□□□ -0.29
SMIM7-209ENST00000487803 ADAMTS13Q76LX8 1427 aa13.26□□□□□ -0.29
SMIM7-209ENST00000487803 CDC42BPGQ6DT37 1551 aa13.26□□□□□ -0.29
SMIM7-209ENST00000487803 CT47B1P0C2W7 299 aaPredicted RBP13.26□□□□□ -0.29
SMIM7-209ENST00000487803 FAM161AQ3B820 660 aa13.26□□□□□ -0.29
SMIM7-209ENST00000487803 PANK1Q8TE04 598 aa13.26□□□□□ -0.29
SMIM7-209ENST00000487803 DIP2AQ14689 1571 aa13.26□□□□□ -0.29
SMIM7-209ENST00000487803 ADAMTSL3P82987 1691 aa13.26□□□□□ -0.29
SMIM7-209ENST00000487803 LTKP29376 864 aa13.25□□□□□ -0.29
SMIM7-209ENST00000487803 COG6Q9Y2V7 657 aa13.25□□□□□ -0.29
SMIM7-209ENST00000487803 CEP170BQ9Y4F5 1589 aaPredicted RBP13.25□□□□□ -0.29
SMIM7-209ENST00000487803 U2SURPO15042 1029 aaKnown RBP13.25□□□□□ -0.29
SMIM7-209ENST00000487803 TMPOP42166 694 aaKnown RBP13.25□□□□□ -0.29
SMIM7-209ENST00000487803 PLPPR3Q6T4P5 718 aa13.25□□□□□ -0.29
SMIM7-209ENST00000487803 FRAT1Q92837 279 aaPredicted RBP13.25□□□□□ -0.29
SMIM7-209ENST00000487803 MAPK8IP3Q9UPT6 1336 aa13.24□□□□□ -0.29
SMIM7-209ENST00000487803 C8orf34Q49A92 452 aa13.24□□□□□ -0.29
SMIM7-209ENST00000487803 WASLO00401 505 aaPredicted RBP13.24□□□□□ -0.29
SMIM7-209ENST00000487803 DIAPH1O60610 1272 aaKnown RBP13.24□□□□□ -0.29
SMIM7-209ENST00000487803 IGHDP01880 384 aa13.24□□□□□ -0.29
SMIM7-209ENST00000487803 DDRGK1Q96HY6 314 aa13.24□□□□□ -0.29
SMIM7-209ENST00000487803 PNNQ9H307 717 aaKnown RBP13.24□□□□□ -0.29
SMIM7-209ENST00000487803 ZNF142P52746 1687 aaPredicted RBP13.23□□□□□ -0.29
SMIM7-209ENST00000487803 IL16Q14005 1332 aa13.23□□□□□ -0.29
SMIM7-209ENST00000487803 TRIM35Q9UPQ4 493 aa13.22□□□□□ -0.29
SMIM7-209ENST00000487803 TBX22Q9Y458 520 aa13.22□□□□□ -0.29
SMIM7-209ENST00000487803 CPSF1Q10570 1443 aaKnown RBP13.22□□□□□ -0.29
SMIM7-209ENST00000487803 EDC4Q6P2E9 1401 aaKnown RBP13.22□□□□□ -0.29
SMIM7-209ENST00000487803 ITSN1Q15811 1721 aa13.22□□□□□ -0.29
SMIM7-209ENST00000487803 RGS3P49796 1198 aa13.21□□□□□ -0.29
SMIM7-209ENST00000487803 PMFBP1Q8TBY8 1022 aa13.21□□□□□ -0.29
SMIM7-209ENST00000487803 VIRMAQ69YN4 1812 aaKnown RBP13.21□□□□□ -0.3
SMIM7-209ENST00000487803 RLBP1P12271 317 aa13.21□□□□□ -0.3
SMIM7-209ENST00000487803 LRRC7Q96NW7 1537 aa13.2□□□□□ -0.3
SMIM7-209ENST00000487803 BCL2L13Q9BXK5 485 aa13.2□□□□□ -0.3
SMIM7-209ENST00000487803 AKAP12Q02952 1782 aa13.2□□□□□ -0.3
SMIM7-209ENST00000487803 PPIP5K1Q6PFW1 1433 aa13.2□□□□□ -0.3
SMIM7-209ENST00000487803 FCHSD2O94868 740 aa13.2□□□□□ -0.3
SMIM7-209ENST00000487803 ROBO2Q9HCK4 1378 aa13.19□□□□□ -0.3
SMIM7-209ENST00000487803 NBR1Q14596 966 aa13.19□□□□□ -0.3
SMIM7-209ENST00000487803 ZKSCAN2Q63HK3 967 aa13.19□□□□□ -0.3
SMIM7-209ENST00000487803 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.19□□□□□ -0.3
SMIM7-209ENST00000487803 TSR2Q969E8 191 aaKnown RBP13.19□□□□□ -0.3
SMIM7-209ENST00000487803 POLKQ9UBT6 870 aa13.19□□□□□ -0.3
SMIM7-209ENST00000487803 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.19□□□□□ -0.3
SMIM7-209ENST00000487803 MON2Q7Z3U7 1717 aa13.18□□□□□ -0.3
SMIM7-209ENST00000487803 RIPK4P57078 832 aa13.18□□□□□ -0.3
SMIM7-209ENST00000487803 TNNQ9UQP3 1299 aa13.18□□□□□ -0.3
SMIM7-209ENST00000487803 MAP2P11137 1827 aaKnown RBP13.18□□□□□ -0.3
SMIM7-209ENST00000487803 EXOSC9Q06265 439 aaKnown RBP13.18□□□□□ -0.3
SMIM7-209ENST00000487803 MVPQ14764 893 aaKnown RBP13.18□□□□□ -0.3
SMIM7-209ENST00000487803 SLC26A8Q96RN1 970 aa13.18□□□□□ -0.3
SMIM7-209ENST00000487803 CCDC61Q9Y6R9 512 aa13.18□□□□□ -0.3
SMIM7-209ENST00000487803 NUDT16Q96DE0 195 aaKnown RBP13.17□□□□□ -0.3
SMIM7-209ENST00000487803 PTCH1Q13635 1447 aa13.17□□□□□ -0.3
SMIM7-209ENST00000487803 CDK12Q9NYV4 1490 aaPredicted RBP13.17□□□□□ -0.3
SMIM7-209ENST00000487803 RSPH6AQ9H0K4 717 aa13.17□□□□□ -0.3
SMIM7-209ENST00000487803 PCDHB15Q9Y5E8 787 aa13.17□□□□□ -0.3
SMIM7-209ENST00000487803 AATKQ6ZMQ8 1374 aa13.17□□□□□ -0.3
SMIM7-209ENST00000487803 PIK3R4Q99570 1358 aa13.17□□□□□ -0.3
SMIM7-209ENST00000487803 DZIP1LQ8IYY4 767 aaKnown RBP13.16□□□□□ -0.3
SMIM7-209ENST00000487803 SMC4Q9NTJ3 1288 aa13.16□□□□□ -0.3
SMIM7-209ENST00000487803 AMOTL2Q9Y2J4 779 aa13.16□□□□□ -0.3
SMIM7-209ENST00000487803 PTPRUQ92729 1446 aa13.16□□□□□ -0.3
SMIM7-209ENST00000487803 XRN1Q8IZH2 1706 aaKnown RBP13.16□□□□□ -0.3
SMIM7-209ENST00000487803 FTSJ3Q8IY81 847 aaKnown RBP13.15□□□□□ -0.3
SMIM7-209ENST00000487803 TOPAZ1Q8N9V7 1692 aa13.15□□□□□ -0.3
SMIM7-209ENST00000487803 ZNF692Q9BU19 519 aaPredicted RBP13.15□□□□□ -0.3
SMIM7-209ENST00000487803 NEFMP07197 916 aa13.14□□□□□ -0.31
SMIM7-209ENST00000487803 RTL5Q5HYW3 569 aaPredicted RBP13.14□□□□□ -0.31
SMIM7-209ENST00000487803 ANKLE2Q86XL3 938 aa13.14□□□□□ -0.31
SMIM7-209ENST00000487803 SSH1Q8WYL5 1049 aa13.14□□□□□ -0.31
SMIM7-209ENST00000487803 RWDD1Q9H446 243 aaPredicted RBP13.14□□□□□ -0.31
SMIM7-209ENST00000487803 CHD2O14647 1828 aaKnown RBP13.14□□□□□ -0.31
SMIM7-209ENST00000487803 PRKAR2BP31323 418 aa13.14□□□□□ -0.31
SMIM7-209ENST00000487803 PPM1GO15355 546 aaPredicted RBP13.13□□□□□ -0.31
SMIM7-209ENST00000487803 TRIM27P14373 513 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms