RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 MON2Q7Z3U7 1717 aa13.12□□□□□ -0.31
LCN2-205ENST00000487719 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.12□□□□□ -0.31
LCN2-205ENST00000487719 PLCH1Q4KWH8 1693 aa13.12□□□□□ -0.31
LCN2-205ENST00000487719 ST20-MTHFSA0A0A6YYL1 179 aa13.11□□□□□ -0.31
LCN2-205ENST00000487719 ZNF692Q9BU19 519 aaPredicted RBP13.11□□□□□ -0.31
LCN2-205ENST00000487719 CABP1Q9NZU7 370 aa13.11□□□□□ -0.31
LCN2-205ENST00000487719 CRYBG1Q9Y4K1 1723 aa13.1□□□□□ -0.31
LCN2-205ENST00000487719 PHRF1Q9P1Y6 1649 aaKnown RBP13.1□□□□□ -0.31
LCN2-205ENST00000487719 NINLQ9Y2I6 1382 aa13.1□□□□□ -0.31
LCN2-205ENST00000487719 PLEKHG5O94827 1062 aa13.1□□□□□ -0.31
LCN2-205ENST00000487719 TMF1P82094 1093 aa13.1□□□□□ -0.31
LCN2-205ENST00000487719 HDGFL2Q7Z4V5 671 aaPredicted RBP13.09□□□□□ -0.31
LCN2-205ENST00000487719 ABTB2Q8N961 1025 aa13.09□□□□□ -0.31
LCN2-205ENST00000487719 TMC1Q8TDI8 760 aa13.09□□□□□ -0.31
LCN2-205ENST00000487719 PUS7Q96PZ0 661 aaKnown RBP13.09□□□□□ -0.31
LCN2-205ENST00000487719 COL14A1Q05707 1796 aaKnown RBP13.09□□□□□ -0.31
LCN2-205ENST00000487719 USP6P35125 1406 aa13.08□□□□□ -0.32
LCN2-205ENST00000487719 TERF2IPQ9NYB0 399 aa13.08□□□□□ -0.32
LCN2-205ENST00000487719 USP21Q9UK80 565 aa13.08□□□□□ -0.32
LCN2-205ENST00000487719 KTN1Q86UP2 1357 aaKnown RBP13.07□□□□□ -0.32
LCN2-205ENST00000487719 NLRP13Q86W25 1043 aa13.07□□□□□ -0.32
LCN2-205ENST00000487719 NRKQ7Z2Y5 1582 aa13.07□□□□□ -0.32
LCN2-205ENST00000487719 RXRBP28702 533 aa13.06□□□□□ -0.32
LCN2-205ENST00000487719 EIF4G2P78344 907 aaKnown RBP eCLIP13.06□□□□□ -0.32
LCN2-205ENST00000487719 ILDR2Q71H61 639 aa13.06□□□□□ -0.32
LCN2-205ENST00000487719 CABLES1Q8TDN4 633 aa13.06□□□□□ -0.32
LCN2-205ENST00000487719 RGS17Q9UGC6 210 aaPredicted RBP13.06□□□□□ -0.32
LCN2-205ENST00000487719 TRPC5Q9UL62 973 aaPredicted RBP13.06□□□□□ -0.32
LCN2-205ENST00000487719 PIK3C2AO00443 1686 aa13.05□□□□□ -0.32
LCN2-205ENST00000487719 POTEAQ6S8J7 498 aa13.05□□□□□ -0.32
LCN2-205ENST00000487719 TTC21AQ8NDW8 1320 aa13.05□□□□□ -0.32
LCN2-205ENST00000487719 RBM6P78332 1123 aaKnown RBP13.04□□□□□ -0.32
LCN2-205ENST00000487719 NUTM2GQ5VZR2 741 aa13.04□□□□□ -0.32
LCN2-205ENST00000487719 FNBP4Q8N3X1 1017 aaPredicted RBP13.04□□□□□ -0.32
LCN2-205ENST00000487719 TESK2Q96S53 571 aa13.04□□□□□ -0.32
LCN2-205ENST00000487719 QTRT2Q9H974 415 aaKnown RBP13.04□□□□□ -0.32
LCN2-205ENST00000487719 PRDM11Q9NQV5 511 aa13.04□□□□□ -0.32
LCN2-205ENST00000487719 NLRP6P59044 892 aa13.03□□□□□ -0.32
LCN2-205ENST00000487719 CPSF1Q10570 1443 aaKnown RBP13.03□□□□□ -0.32
LCN2-205ENST00000487719 CDK12Q9NYV4 1490 aaPredicted RBP13.03□□□□□ -0.32
LCN2-205ENST00000487719 NRAPQ86VF7 1730 aa13.02□□□□□ -0.32
LCN2-205ENST00000487719 KIF20BQ96Q89 1820 aa13.02□□□□□ -0.32
LCN2-205ENST00000487719 SOCS7O14512 581 aa13.02□□□□□ -0.33
LCN2-205ENST00000487719 UNC5CLQ8IV45 518 aa13.02□□□□□ -0.33
LCN2-205ENST00000487719 EDC4Q6P2E9 1401 aaKnown RBP13.02□□□□□ -0.33
LCN2-205ENST00000487719 SLIT2O94813 1529 aa13.02□□□□□ -0.33
LCN2-205ENST00000487719 CCDC9Q9Y3X0 531 aaKnown RBP13.01□□□□□ -0.33
LCN2-205ENST00000487719 TTC21BQ7Z4L5 1316 aa13.01□□□□□ -0.33
LCN2-205ENST00000487719 USP54Q70EL1 1684 aa13.01□□□□□ -0.33
LCN2-205ENST00000487719 LTN1O94822 1766 aa13.01□□□□□ -0.33
LCN2-205ENST00000487719 MYOM1P52179 1685 aa13□□□□□ -0.33
LCN2-205ENST00000487719 ATRNO75882 1429 aa13□□□□□ -0.33
LCN2-205ENST00000487719 USP19O94966 1318 aa13□□□□□ -0.33
LCN2-205ENST00000487719 KCNH5Q8NCM2 988 aa13□□□□□ -0.33
LCN2-205ENST00000487719 SLC12A5Q9H2X9 1139 aa13□□□□□ -0.33
LCN2-205ENST00000487719 BCL9LQ86UU0 1499 aa12.99□□□□□ -0.33
LCN2-205ENST00000487719 A0A1W2PP64 1363 aa12.99□□□□□ -0.33
LCN2-205ENST00000487719 ANKRD36BQ8N2N9 1353 aa12.99□□□□□ -0.33
LCN2-205ENST00000487719 KIAA0232Q92628 1395 aa12.99□□□□□ -0.33
LCN2-205ENST00000487719 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.99□□□□□ -0.33
LCN2-205ENST00000487719 SLIT3O75094 1523 aa12.98□□□□□ -0.33
LCN2-205ENST00000487719 SSH2Q76I76 1423 aa12.98□□□□□ -0.33
LCN2-205ENST00000487719 GCP02774 474 aa12.98□□□□□ -0.33
LCN2-205ENST00000487719 ZC3H6P61129 1189 aaKnown RBP12.98□□□□□ -0.33
LCN2-205ENST00000487719 POLR3GLQ9BT43 218 aa12.98□□□□□ -0.33
LCN2-205ENST00000487719 BTG4Q9NY30 223 aa12.98□□□□□ -0.33
LCN2-205ENST00000487719 CD163L1Q9NR16 1453 aa12.97□□□□□ -0.33
LCN2-205ENST00000487719 RGPD5Q99666 1765 aa12.97□□□□□ -0.33
LCN2-205ENST00000487719 CPDO75976 1380 aa12.97□□□□□ -0.33
LCN2-205ENST00000487719 ZBTB7CA1YPR0 619 aa12.97□□□□□ -0.33
LCN2-205ENST00000487719 FAM83GA6ND36 823 aa12.97□□□□□ -0.33
LCN2-205ENST00000487719 HSPA5P11021 654 aaKnown RBP12.97□□□□□ -0.33
LCN2-205ENST00000487719 EVA1CP58658 441 aa12.97□□□□□ -0.33
LCN2-205ENST00000487719 VPS72Q15906 364 aa12.96□□□□□ -0.33
LCN2-205ENST00000487719 GJD4Q96KN9 370 aaPredicted RBP12.96□□□□□ -0.33
LCN2-205ENST00000487719 BRWD3Q6RI45 1802 aa12.95□□□□□ -0.34
LCN2-205ENST00000487719 A0A0G2JS52 829 aa12.95□□□□□ -0.34
LCN2-205ENST00000487719 MYT1Q01538 1121 aa12.95□□□□□ -0.34
LCN2-205ENST00000487719 LMO7Q8WWI1 1683 aa12.95□□□□□ -0.34
LCN2-205ENST00000487719 RGS12O14924 1447 aa12.95□□□□□ -0.34
LCN2-205ENST00000487719 ABCC6O95255 1503 aa12.94□□□□□ -0.34
LCN2-205ENST00000487719 SOX12O15370 315 aa12.94□□□□□ -0.34
LCN2-205ENST00000487719 CHRNA2Q15822 529 aa12.94□□□□□ -0.34
LCN2-205ENST00000487719 COG3Q96JB2 828 aa12.94□□□□□ -0.34
LCN2-205ENST00000487719 GLI3P10071 1580 aa12.94□□□□□ -0.34
LCN2-205ENST00000487719 USP31Q70CQ4 1352 aa12.94□□□□□ -0.34
LCN2-205ENST00000487719 STRN4Q9NRL3 753 aa12.93□□□□□ -0.34
LCN2-205ENST00000487719 ANKRD26Q9UPS8 1709 aa12.93□□□□□ -0.34
LCN2-205ENST00000487719 NME9Q86XW9 330 aa12.92□□□□□ -0.34
LCN2-205ENST00000487719 FAM208AQ9UK61 1670 aaKnown RBP12.92□□□□□ -0.34
LCN2-205ENST00000487719 NFAT5O94916 1531 aa12.92□□□□□ -0.34
LCN2-205ENST00000487719 AATKQ6ZMQ8 1374 aa12.92□□□□□ -0.34
LCN2-205ENST00000487719 COL18A1P39060 1754 aa12.92□□□□□ -0.34
LCN2-205ENST00000487719 KAT6BQ8WYB5 2073 aa12.91□□□□□ -0.34
LCN2-205ENST00000487719 MAP2P11137 1827 aaKnown RBP12.9□□□□□ -0.34
LCN2-205ENST00000487719 WNK3Q9BYP7 1800 aa12.9□□□□□ -0.34
LCN2-205ENST00000487719 CAMTA1Q9Y6Y1 1673 aa12.9□□□□□ -0.34
LCN2-205ENST00000487719 COL5A2P05997 1499 aaPredicted RBP12.9□□□□□ -0.34
LCN2-205ENST00000487719 CGNL1Q0VF96 1302 aa12.89□□□□□ -0.35
LCN2-205ENST00000487719 OVOS2A0A0J9YW53 1432 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms