RNA–Protein interactions for RNA: ENST00000487519.5

TFAM-204, Transcript of transcription factor A, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFAM, Length 5,414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-204ENST00000487519 ZNF530Q6P9A1 599 aaPredicted RBP16.8■□□□□ 0.28
TFAM-204ENST00000487519 FBXO3Q9UK99 471 aa16.8■□□□□ 0.28
TFAM-204ENST00000487519 NEK4P51957 841 aa16.79■□□□□ 0.28
TFAM-204ENST00000487519 NAP1L1P55209 391 aaKnown RBP16.79■□□□□ 0.28
TFAM-204ENST00000487519 NOB1Q9ULX3 412 aaKnown RBP16.79■□□□□ 0.28
TFAM-204ENST00000487519 XBP1P17861 261 aa16.79■□□□□ 0.28
TFAM-204ENST00000487519 SART3Q15020 963 aaKnown RBP16.79■□□□□ 0.28
TFAM-204ENST00000487519 SIL1Q9H173 461 aa16.79■□□□□ 0.28
TFAM-204ENST00000487519 CABP4P57796 275 aa16.79■□□□□ 0.28
TFAM-204ENST00000487519 PDZRN3Q9UPQ7 1066 aa16.79■□□□□ 0.28
TFAM-204ENST00000487519 SMG6Q86US8 1419 aaKnown RBP16.78■□□□□ 0.28
TFAM-204ENST00000487519 GNAI2P04899 355 aa16.78■□□□□ 0.28
TFAM-204ENST00000487519 BCAR3O75815 825 aa16.78■□□□□ 0.28
TFAM-204ENST00000487519 XPCQ01831 940 aaPredicted RBP16.78■□□□□ 0.28
TFAM-204ENST00000487519 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.78■□□□□ 0.28
TFAM-204ENST00000487519 HSP90AA2PQ14568 343 aaPredicted RBP16.77■□□□□ 0.28
TFAM-204ENST00000487519 RNF214Q8ND24 703 aa16.77■□□□□ 0.28
TFAM-204ENST00000487519 MYL6BP14649 208 aa16.77■□□□□ 0.28
TFAM-204ENST00000487519 STK11IPQ8N1F8 1099 aa16.77■□□□□ 0.27
TFAM-204ENST00000487519 FANCIQ9NVI1 1328 aa16.77■□□□□ 0.27
TFAM-204ENST00000487519 GPS2Q13227 327 aa16.77■□□□□ 0.27
TFAM-204ENST00000487519 NBPF8Q3BBV2 869 aa16.76■□□□□ 0.27
TFAM-204ENST00000487519 CT47A1Q5JQC4 288 aaPredicted RBP16.76■□□□□ 0.27
TFAM-204ENST00000487519 BCL11BQ9C0K0 894 aaPredicted RBP16.76■□□□□ 0.27
TFAM-204ENST00000487519 IFT57Q9NWB7 429 aa16.76■□□□□ 0.27
TFAM-204ENST00000487519 RRS1Q15050 365 aaKnown RBP16.75■□□□□ 0.27
TFAM-204ENST00000487519 PRDM11Q9NQV5 511 aa16.75■□□□□ 0.27
TFAM-204ENST00000487519 TTC39AQ5SRH9 613 aa16.75■□□□□ 0.27
TFAM-204ENST00000487519 ZNF692Q9BU19 519 aaPredicted RBP16.75■□□□□ 0.27
TFAM-204ENST00000487519 R3HCC1Q9Y3T6 440 aaKnown RBP16.75■□□□□ 0.27
TFAM-204ENST00000487519 C9orf84Q5VXU9 1444 aa16.75■□□□□ 0.27
TFAM-204ENST00000487519 OFD1O75665 1012 aa16.75■□□□□ 0.27
TFAM-204ENST00000487519 CCDC158Q5M9N0 1113 aa16.75■□□□□ 0.27
TFAM-204ENST00000487519 OLFM4Q6UX06 510 aa16.74■□□□□ 0.27
TFAM-204ENST00000487519 ATP2B2Q01814 1243 aa16.74■□□□□ 0.27
TFAM-204ENST00000487519 PDILTQ8N807 584 aa16.74■□□□□ 0.27
TFAM-204ENST00000487519 SLC52A1Q9NWF4 448 aa16.74■□□□□ 0.27
TFAM-204ENST00000487519 PATL2C9JE40 543 aaKnown RBP16.74■□□□□ 0.27
TFAM-204ENST00000487519 NCAPD3P42695 1498 aa16.74■□□□□ 0.27
TFAM-204ENST00000487519 EPS15P42566 896 aa16.73■□□□□ 0.27
TFAM-204ENST00000487519 ERC1Q8IUD2 1116 aa16.73■□□□□ 0.27
TFAM-204ENST00000487519 SRCIN1Q9C0H9 1055 aa16.73■□□□□ 0.27
TFAM-204ENST00000487519 HFM1A2PYH4 1435 aa16.73■□□□□ 0.27
TFAM-204ENST00000487519 ARAP1Q96P48 1450 aa16.73■□□□□ 0.27
TFAM-204ENST00000487519 CEBPZQ03701 1054 aaKnown RBP16.73■□□□□ 0.27
TFAM-204ENST00000487519 FMNL2Q96PY5 1086 aa16.72■□□□□ 0.27
TFAM-204ENST00000487519 MAP4K4O95819 1239 aaPredicted RBP16.72■□□□□ 0.27
TFAM-204ENST00000487519 NFKBIBQ15653 356 aa16.72■□□□□ 0.27
TFAM-204ENST00000487519 ANKLE2Q86XL3 938 aa16.72■□□□□ 0.27
TFAM-204ENST00000487519 RTEL1-TNFRSF6BF6WH68 1400 aa16.72■□□□□ 0.27
TFAM-204ENST00000487519 SPG7Q9UQ90 795 aa16.71■□□□□ 0.27
TFAM-204ENST00000487519 SLC3A2P08195 630 aaKnown RBP16.71■□□□□ 0.27
TFAM-204ENST00000487519 ZFYVE27Q5T4F4 411 aa16.71■□□□□ 0.27
TFAM-204ENST00000487519 GNL3LQ9NVN8 582 aaKnown RBP16.71■□□□□ 0.27
TFAM-204ENST00000487519 HIP1O00291 1037 aa16.71■□□□□ 0.27
TFAM-204ENST00000487519 ZC3H6P61129 1189 aaKnown RBP16.71■□□□□ 0.27
TFAM-204ENST00000487519 PIP4K2BP78356 416 aa16.71■□□□□ 0.27
TFAM-204ENST00000487519 ODF2Q5BJF6 829 aa16.71■□□□□ 0.27
TFAM-204ENST00000487519 GCC1Q96CN9 775 aa16.71■□□□□ 0.27
TFAM-204ENST00000487519 FIBPO43427 364 aa16.71■□□□□ 0.26
TFAM-204ENST00000487519 NAT10Q9H0A0 1025 aaKnown RBP16.71■□□□□ 0.26
TFAM-204ENST00000487519 FAM13BQ9NYF5 915 aa16.71■□□□□ 0.26
TFAM-204ENST00000487519 NESP48681 1621 aa16.7■□□□□ 0.26
TFAM-204ENST00000487519 CCT4P50991 539 aaKnown RBP16.7■□□□□ 0.26
TFAM-204ENST00000487519 KIAA1107Q9UPP5 1409 aa16.7■□□□□ 0.26
TFAM-204ENST00000487519 STK3Q13188 491 aa16.7■□□□□ 0.26
TFAM-204ENST00000487519 PDE3AQ14432 1141 aa16.7■□□□□ 0.26
TFAM-204ENST00000487519 TTLL5Q6EMB2 1281 aa16.7■□□□□ 0.26
TFAM-204ENST00000487519 CAVIN1Q6NZI2 390 aaKnown RBP16.7■□□□□ 0.26
TFAM-204ENST00000487519 MPHOSPH8Q99549 860 aa16.7■□□□□ 0.26
TFAM-204ENST00000487519 KINO60870 393 aaKnown RBP16.69■□□□□ 0.26
TFAM-204ENST00000487519 MNS1Q8NEH6 495 aa16.69■□□□□ 0.26
TFAM-204ENST00000487519 LRRCC1Q9C099 1032 aa16.69■□□□□ 0.26
TFAM-204ENST00000487519 PNISRQ8TF01 805 aaKnown RBP16.69■□□□□ 0.26
TFAM-204ENST00000487519 CCAR1Q8IX12 1150 aaKnown RBP16.68■□□□□ 0.26
TFAM-204ENST00000487519 RSPH6AQ9H0K4 717 aa16.68■□□□□ 0.26
TFAM-204ENST00000487519 CCDC85AQ96PX6 553 aaPredicted RBP16.68■□□□□ 0.26
TFAM-204ENST00000487519 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.68■□□□□ 0.26
TFAM-204ENST00000487519 SF3B2Q13435 895 aaKnown RBP16.68■□□□□ 0.26
TFAM-204ENST00000487519 CCDC57Q2TAC2 916 aa16.68■□□□□ 0.26
TFAM-204ENST00000487519 CDK5RAP3Q96JB5 506 aa16.68■□□□□ 0.26
TFAM-204ENST00000487519 PRPF40AO75400 957 aaKnown RBP16.68■□□□□ 0.26
TFAM-204ENST00000487519 PDCP20941 246 aa16.68■□□□□ 0.26
TFAM-204ENST00000487519 FKBP4Q02790 459 aaKnown RBP eCLIP16.67■□□□□ 0.26
TFAM-204ENST00000487519 STK38Q15208 465 aa16.67■□□□□ 0.26
TFAM-204ENST00000487519 TMEM132AQ24JP5 1023 aa16.67■□□□□ 0.26
TFAM-204ENST00000487519 TRIM5Q9C035 493 aa16.67■□□□□ 0.26
TFAM-204ENST00000487519 RABEP1Q15276 862 aa16.67■□□□□ 0.26
TFAM-204ENST00000487519 ATF7IPQ6VMQ6 1270 aa16.67■□□□□ 0.26
TFAM-204ENST00000487519 SRGAP3O43295 1099 aa16.67■□□□□ 0.26
TFAM-204ENST00000487519 NASPP49321 788 aaPredicted RBP16.67■□□□□ 0.26
TFAM-204ENST00000487519 ERBINQ96RT1 1412 aa16.66■□□□□ 0.26
TFAM-204ENST00000487519 BTBD11A6QL63 1104 aa16.66■□□□□ 0.26
TFAM-204ENST00000487519 BRPF1P55201 1214 aaPredicted RBP16.66■□□□□ 0.26
TFAM-204ENST00000487519 BICDL1Q6ZP65 573 aa16.66■□□□□ 0.26
TFAM-204ENST00000487519 FAM43AQ8N2R8 423 aa16.66■□□□□ 0.26
TFAM-204ENST00000487519 AACSQ86V21 672 aa16.65■□□□□ 0.26
TFAM-204ENST00000487519 KRT18P05783 430 aaKnown RBP16.65■□□□□ 0.26
TFAM-204ENST00000487519 KRI1Q8N9T8 703 aaKnown RBP16.65■□□□□ 0.26
TFAM-204ENST00000487519 NACAP1Q9BZK3 213 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms