RNA–Protein interactions for RNA: ENST00000487241.1

TRIM5-210, Transcript of tripartite motif containing 5, humanhuman

TSL 1 (best)

Gene TRIM5, Length 756 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM5-210ENST00000487241 GJD4Q96KN9 370 aaPredicted RBP11.47□□□□□ -0.57
TRIM5-210ENST00000487241 LRP5O75197 1615 aa11.46□□□□□ -0.57
TRIM5-210ENST00000487241 LMOD2Q6P5Q4 547 aa11.46□□□□□ -0.57
TRIM5-210ENST00000487241 SPOCK2Q92563 424 aa11.46□□□□□ -0.57
TRIM5-210ENST00000487241 CCDC9Q9Y3X0 531 aaKnown RBP11.46□□□□□ -0.57
TRIM5-210ENST00000487241 ATRNO75882 1429 aa11.45□□□□□ -0.58
TRIM5-210ENST00000487241 SAFB2Q14151 953 aaKnown RBP eCLIP11.45□□□□□ -0.58
TRIM5-210ENST00000487241 KRT28Q7Z3Y7 464 aa11.45□□□□□ -0.58
TRIM5-210ENST00000487241 STAC3Q96MF2 364 aa11.45□□□□□ -0.58
TRIM5-210ENST00000487241 PRAM1Q96QH2 718 aa11.45□□□□□ -0.58
TRIM5-210ENST00000487241 POGKQ9P215 609 aa11.45□□□□□ -0.58
TRIM5-210ENST00000487241 ADGRB1O14514 1584 aa11.45□□□□□ -0.58
TRIM5-210ENST00000487241 DLC1Q96QB1 1528 aa11.45□□□□□ -0.58
TRIM5-210ENST00000487241 PXDNQ92626 1479 aa11.44□□□□□ -0.58
TRIM5-210ENST00000487241 KIF1AQ12756 1690 aa11.44□□□□□ -0.58
TRIM5-210ENST00000487241 PSME1Q06323 249 aa11.44□□□□□ -0.58
TRIM5-210ENST00000487241 SF3B2Q13435 895 aaKnown RBP11.44□□□□□ -0.58
TRIM5-210ENST00000487241 UNC5CLQ8IV45 518 aa11.44□□□□□ -0.58
TRIM5-210ENST00000487241 EP400Q96L91 3159 aa11.44□□□□□ -0.58
TRIM5-210ENST00000487241 COL22A1Q8NFW1 1626 aaPredicted RBP11.43□□□□□ -0.58
TRIM5-210ENST00000487241 TRAK1Q9UPV9 953 aa11.43□□□□□ -0.58
TRIM5-210ENST00000487241 RGPD8O14715 1765 aaPredicted RBP11.43□□□□□ -0.58
TRIM5-210ENST00000487241 A0A0G2JS52 829 aa11.42□□□□□ -0.58
TRIM5-210ENST00000487241 MYT1Q01538 1121 aa11.42□□□□□ -0.58
TRIM5-210ENST00000487241 PHF8Q9UPP1 1060 aa11.42□□□□□ -0.58
TRIM5-210ENST00000487241 BCL9LQ86UU0 1499 aa11.42□□□□□ -0.58
TRIM5-210ENST00000487241 SPATA31A3Q5VYP0 1347 aa11.41□□□□□ -0.58
TRIM5-210ENST00000487241 CABLES1Q8TDN4 633 aa11.41□□□□□ -0.58
TRIM5-210ENST00000487241 CREBZFQ9NS37 354 aa11.41□□□□□ -0.58
TRIM5-210ENST00000487241 ADGRB2O60241 1585 aa11.41□□□□□ -0.58
TRIM5-210ENST00000487241 HIRIP3Q9BW71 556 aaPredicted RBP11.4□□□□□ -0.58
TRIM5-210ENST00000487241 ANKARQ7Z5J8 1434 aa11.39□□□□□ -0.59
TRIM5-210ENST00000487241 SEPT12Q8IYM1 358 aa11.39□□□□□ -0.59
TRIM5-210ENST00000487241 ZBTB47Q9UFB7 747 aaPredicted RBP11.39□□□□□ -0.59
TRIM5-210ENST00000487241 USP32Q8NFA0 1604 aa11.38□□□□□ -0.59
TRIM5-210ENST00000487241 MINK1Q8N4C8 1332 aaPredicted RBP11.38□□□□□ -0.59
TRIM5-210ENST00000487241 ARHGEF28Q8N1W1 1705 aaKnown RBP11.38□□□□□ -0.59
TRIM5-210ENST00000487241 MARF1Q9Y4F3 1742 aaKnown RBP11.38□□□□□ -0.59
TRIM5-210ENST00000487241 YY1P25490 414 aa11.38□□□□□ -0.59
TRIM5-210ENST00000487241 EIF3AQ14152 1382 aaKnown RBP11.38□□□□□ -0.59
TRIM5-210ENST00000487241 VPS72Q15906 364 aa11.37□□□□□ -0.59
TRIM5-210ENST00000487241 DEFB132Q7Z7B7 95 aa11.37□□□□□ -0.59
TRIM5-210ENST00000487241 PMFBP1Q8TBY8 1022 aa11.37□□□□□ -0.59
TRIM5-210ENST00000487241 KIAA1210Q9ULL0 1709 aa11.37□□□□□ -0.59
TRIM5-210ENST00000487241 RALGAPBQ86X10 1494 aa11.37□□□□□ -0.59
TRIM5-210ENST00000487241 BLMP54132 1417 aaPredicted RBP11.36□□□□□ -0.59
TRIM5-210ENST00000487241 TNS3Q68CZ2 1445 aa11.36□□□□□ -0.59
TRIM5-210ENST00000487241 TULP4Q9NRJ4 1543 aa11.36□□□□□ -0.59
TRIM5-210ENST00000487241 WASLO00401 505 aaPredicted RBP11.36□□□□□ -0.59
TRIM5-210ENST00000487241 KRT27Q7Z3Y8 459 aa11.36□□□□□ -0.59
TRIM5-210ENST00000487241 SLIT2O94813 1529 aa11.35□□□□□ -0.59
TRIM5-210ENST00000487241 SBNO1A3KN83 1393 aa11.34□□□□□ -0.59
TRIM5-210ENST00000487241 ARHGEF10O15013 1369 aa11.34□□□□□ -0.59
TRIM5-210ENST00000487241 FAM83GA6ND36 823 aa11.34□□□□□ -0.59
TRIM5-210ENST00000487241 PRR36Q9H6K5 1346 aa11.34□□□□□ -0.59
TRIM5-210ENST00000487241 GPRASP1Q5JY77 1395 aa11.33□□□□□ -0.6
TRIM5-210ENST00000487241 ITSN1Q15811 1721 aa11.33□□□□□ -0.6
TRIM5-210ENST00000487241 PAK3O75914 559 aaPredicted RBP11.33□□□□□ -0.6
TRIM5-210ENST00000487241 BAG6P46379 1132 aa11.33□□□□□ -0.6
TRIM5-210ENST00000487241 FAM98CQ17RN3 349 aaKnown RBP11.33□□□□□ -0.6
TRIM5-210ENST00000487241 MNX1P50219 401 aaPredicted RBP11.32□□□□□ -0.6
TRIM5-210ENST00000487241 NBPF1Q3BBV0 1214 aa11.32□□□□□ -0.6
TRIM5-210ENST00000487241 NGDNQ8NEJ9 315 aaKnown RBP11.32□□□□□ -0.6
TRIM5-210ENST00000487241 BTG4Q9NY30 223 aa11.32□□□□□ -0.6
TRIM5-210ENST00000487241 ABCA3Q99758 1704 aa11.32□□□□□ -0.6
TRIM5-210ENST00000487241 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.32□□□□□ -0.6
TRIM5-210ENST00000487241 TRPM3Q9HCF6 1732 aaPredicted RBP11.32□□□□□ -0.6
TRIM5-210ENST00000487241 ONECUT3O60422 494 aaPredicted RBP11.31□□□□□ -0.6
TRIM5-210ENST00000487241 L3MBTL2Q969R5 705 aa11.31□□□□□ -0.6
TRIM5-210ENST00000487241 SIN3AQ96ST3 1273 aa11.31□□□□□ -0.6
TRIM5-210ENST00000487241 GLI3P10071 1580 aa11.31□□□□□ -0.6
TRIM5-210ENST00000487241 ATP7BP35670 1465 aa11.31□□□□□ -0.6
TRIM5-210ENST00000487241 PSDA5PKW4 1024 aaPredicted RBP11.3□□□□□ -0.6
TRIM5-210ENST00000487241 NEUROD1Q13562 356 aa11.3□□□□□ -0.6
TRIM5-210ENST00000487241 NUDT16Q96DE0 195 aaKnown RBP11.3□□□□□ -0.6
TRIM5-210ENST00000487241 CDK19Q9BWU1 502 aa11.3□□□□□ -0.6
TRIM5-210ENST00000487241 ALS2Q96Q42 1657 aa11.3□□□□□ -0.6
TRIM5-210ENST00000487241 PLCH1Q4KWH8 1693 aa11.29□□□□□ -0.6
TRIM5-210ENST00000487241 SENP3-EIF4A1A0A087X0R7 540 aa11.28□□□□□ -0.6
TRIM5-210ENST00000487241 FAM182BQ5T319 152 aa11.28□□□□□ -0.6
TRIM5-210ENST00000487241 CHADLQ6NUI6 762 aa11.28□□□□□ -0.6
TRIM5-210ENST00000487241 NWD2Q9ULI1 1742 aa11.28□□□□□ -0.6
TRIM5-210ENST00000487241 CENPJQ9HC77 1338 aaPredicted RBP11.28□□□□□ -0.6
TRIM5-210ENST00000487241 TOPAZ1Q8N9V7 1692 aa11.27□□□□□ -0.6
TRIM5-210ENST00000487241 EN1Q05925 392 aaPredicted RBP11.27□□□□□ -0.61
TRIM5-210ENST00000487241 PRDM11Q9NQV5 511 aa11.27□□□□□ -0.61
TRIM5-210ENST00000487241 CCDC61Q9Y6R9 512 aa11.27□□□□□ -0.61
TRIM5-210ENST00000487241 TRPM1Q7Z4N2 1603 aa11.27□□□□□ -0.61
TRIM5-210ENST00000487241 QRICH2Q9H0J4 1663 aa11.27□□□□□ -0.61
TRIM5-210ENST00000487241 NUBP1P53384 320 aa11.26□□□□□ -0.61
TRIM5-210ENST00000487241 EVA1CP58658 441 aa11.26□□□□□ -0.61
TRIM5-210ENST00000487241 SRPK2P78362 688 aaKnown RBP11.26□□□□□ -0.61
TRIM5-210ENST00000487241 STRN4Q9NRL3 753 aa11.25□□□□□ -0.61
TRIM5-210ENST00000487241 CIZ1Q9ULV3 898 aaPredicted RBP11.25□□□□□ -0.61
TRIM5-210ENST00000487241 CRYBG1Q9Y4K1 1723 aa11.25□□□□□ -0.61
TRIM5-210ENST00000487241 ACEP12821 1306 aa11.25□□□□□ -0.61
TRIM5-210ENST00000487241 POLR3AO14802 1390 aaPredicted RBP11.25□□□□□ -0.61
TRIM5-210ENST00000487241 ROCK2O75116 1388 aaKnown RBP11.25□□□□□ -0.61
TRIM5-210ENST00000487241 COL14A1Q05707 1796 aaKnown RBP11.24□□□□□ -0.61
TRIM5-210ENST00000487241 BRWD3Q6RI45 1802 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms