RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 FSD1Q9BTV5 496 aa17.68■□□□□ 0.42
EPHB4-206ENST00000487222 FBXW7Q969H0 707 aa17.67■□□□□ 0.42
EPHB4-206ENST00000487222 NOB1Q9ULX3 412 aaKnown RBP17.67■□□□□ 0.42
EPHB4-206ENST00000487222 AIMP1Q12904 312 aaKnown RBP17.67■□□□□ 0.42
EPHB4-206ENST00000487222 PRAM1Q96QH2 718 aa17.67■□□□□ 0.42
EPHB4-206ENST00000487222 SLC52A1Q9NWF4 448 aa17.67■□□□□ 0.42
EPHB4-206ENST00000487222 PRPF40AO75400 957 aaKnown RBP17.67■□□□□ 0.42
EPHB4-206ENST00000487222 FOSBP53539 338 aa17.67■□□□□ 0.42
EPHB4-206ENST00000487222 WASHC4Q2M389 1173 aa17.67■□□□□ 0.42
EPHB4-206ENST00000487222 BRPF3Q9ULD4 1205 aa17.66■□□□□ 0.42
EPHB4-206ENST00000487222 TXNDC2Q86VQ3 553 aa17.66■□□□□ 0.42
EPHB4-206ENST00000487222 DNMBPQ6XZF7 1577 aa17.66■□□□□ 0.42
EPHB4-206ENST00000487222 DAPK1P53355 1430 aa17.66■□□□□ 0.42
EPHB4-206ENST00000487222 CCDC173Q0VFZ6 552 aa17.66■□□□□ 0.42
EPHB4-206ENST00000487222 NLRP2Q9NX02 1062 aa17.66■□□□□ 0.42
EPHB4-206ENST00000487222 TSR2Q969E8 191 aaKnown RBP17.65■□□□□ 0.42
EPHB4-206ENST00000487222 CWC22Q9HCG8 908 aaKnown RBP17.65■□□□□ 0.42
EPHB4-206ENST00000487222 HIP1O00291 1037 aa17.65■□□□□ 0.42
EPHB4-206ENST00000487222 SLC12A5Q9H2X9 1139 aa17.65■□□□□ 0.42
EPHB4-206ENST00000487222 TSPY26PQ9H489 355 aa17.65■□□□□ 0.42
EPHB4-206ENST00000487222 NUTM2GQ5VZR2 741 aa17.65■□□□□ 0.42
EPHB4-206ENST00000487222 GNAI2P04899 355 aa17.65■□□□□ 0.42
EPHB4-206ENST00000487222 OLFM4Q6UX06 510 aa17.65■□□□□ 0.42
EPHB4-206ENST00000487222 DHX16O60231 1041 aaKnown RBP17.64■□□□□ 0.42
EPHB4-206ENST00000487222 SYTL4Q96C24 671 aaPredicted RBP17.64■□□□□ 0.41
EPHB4-206ENST00000487222 ATF7IPQ6VMQ6 1270 aa17.64■□□□□ 0.41
EPHB4-206ENST00000487222 C1orf115Q9H7X2 142 aa17.64■□□□□ 0.41
EPHB4-206ENST00000487222 TRIM5Q9C035 493 aa17.64■□□□□ 0.41
EPHB4-206ENST00000487222 MVPQ14764 893 aaKnown RBP17.63■□□□□ 0.41
EPHB4-206ENST00000487222 ACBD3Q9H3P7 528 aa17.63■□□□□ 0.41
EPHB4-206ENST00000487222 CCDC27Q2M243 656 aa17.63■□□□□ 0.41
EPHB4-206ENST00000487222 KIAA0586Q9BVV6 1533 aa17.63■□□□□ 0.41
EPHB4-206ENST00000487222 GPRASP1Q5JY77 1395 aa17.62■□□□□ 0.41
EPHB4-206ENST00000487222 CCDC184Q52MB2 194 aa17.62■□□□□ 0.41
EPHB4-206ENST00000487222 KINO60870 393 aaKnown RBP17.62■□□□□ 0.41
EPHB4-206ENST00000487222 ERC1Q8IUD2 1116 aa17.62■□□□□ 0.41
EPHB4-206ENST00000487222 HMGN5P82970 282 aaKnown RBP17.61■□□□□ 0.41
EPHB4-206ENST00000487222 ABTB2Q8N961 1025 aa17.61■□□□□ 0.41
EPHB4-206ENST00000487222 K7ELQ4 463 aaPredicted RBP17.61■□□□□ 0.41
EPHB4-206ENST00000487222 TRIM34Q9BYJ4 488 aa17.61■□□□□ 0.41
EPHB4-206ENST00000487222 XBP1P17861 261 aa17.61■□□□□ 0.41
EPHB4-206ENST00000487222 ERBINQ96RT1 1412 aa17.61■□□□□ 0.41
EPHB4-206ENST00000487222 CCT4P50991 539 aaKnown RBP17.6■□□□□ 0.41
EPHB4-206ENST00000487222 SUPT6HQ7KZ85 1726 aaKnown RBP17.6■□□□□ 0.41
EPHB4-206ENST00000487222 RAD21O60216 631 aa17.6■□□□□ 0.41
EPHB4-206ENST00000487222 BRMS1Q9HCU9 246 aa17.6■□□□□ 0.41
EPHB4-206ENST00000487222 FIBPO43427 364 aa17.6■□□□□ 0.41
EPHB4-206ENST00000487222 HSP90B2PQ58FF3 399 aa17.6■□□□□ 0.41
EPHB4-206ENST00000487222 SLC4A2P04920 1241 aa17.59■□□□□ 0.41
EPHB4-206ENST00000487222 EPRSP07814 1512 aaKnown RBP17.59■□□□□ 0.41
EPHB4-206ENST00000487222 CIZ1Q9ULV3 898 aaPredicted RBP17.59■□□□□ 0.41
EPHB4-206ENST00000487222 RPGRIP1LQ68CZ1 1315 aa17.59■□□□□ 0.41
EPHB4-206ENST00000487222 ZNF692Q9BU19 519 aaPredicted RBP17.59■□□□□ 0.41
EPHB4-206ENST00000487222 ANKRD30BQ9BXX2 1392 aa17.59■□□□□ 0.41
EPHB4-206ENST00000487222 ABCA10Q8WWZ4 1543 aa17.59■□□□□ 0.41
EPHB4-206ENST00000487222 TCEAL9Q9UHQ7 104 aa17.58■□□□□ 0.41
EPHB4-206ENST00000487222 NAIPQ13075 1403 aa17.58■□□□□ 0.41
EPHB4-206ENST00000487222 WDR97A6NE52 1622 aa17.58■□□□□ 0.4
EPHB4-206ENST00000487222 CHD1LQ86WJ1 897 aa17.58■□□□□ 0.4
EPHB4-206ENST00000487222 RUFY1Q96T51 708 aa17.58■□□□□ 0.4
EPHB4-206ENST00000487222 CDK19Q9BWU1 502 aa17.58■□□□□ 0.4
EPHB4-206ENST00000487222 PLEKHO1Q53GL0 409 aaPredicted RBP17.57■□□□□ 0.4
EPHB4-206ENST00000487222 ZNF428Q96B54 188 aa17.57■□□□□ 0.4
EPHB4-206ENST00000487222 CABP1Q9NZU7 370 aa17.57■□□□□ 0.4
EPHB4-206ENST00000487222 WDR33Q9C0J8 1336 aaKnown RBP17.57■□□□□ 0.4
EPHB4-206ENST00000487222 THEMISQ8N1K5 641 aaPredicted RBP17.57■□□□□ 0.4
EPHB4-206ENST00000487222 LRRCC1Q9C099 1032 aa17.57■□□□□ 0.4
EPHB4-206ENST00000487222 WWC1Q8IX03 1113 aa17.57■□□□□ 0.4
EPHB4-206ENST00000487222 AK7Q96M32 723 aa17.57■□□□□ 0.4
EPHB4-206ENST00000487222 SART3Q15020 963 aaKnown RBP17.57■□□□□ 0.4
EPHB4-206ENST00000487222 PDILTQ8N807 584 aa17.57■□□□□ 0.4
EPHB4-206ENST00000487222 ZNF396Q96N95 335 aaPredicted RBP17.57■□□□□ 0.4
EPHB4-206ENST00000487222 GRPEL1Q9HAV7 217 aa17.56■□□□□ 0.4
EPHB4-206ENST00000487222 CDR1P51861 262 aa17.56■□□□□ 0.4
EPHB4-206ENST00000487222 HDGFL1Q5TGJ6 251 aa17.56■□□□□ 0.4
EPHB4-206ENST00000487222 AEBP1Q8IUX7 1158 aa17.56■□□□□ 0.4
EPHB4-206ENST00000487222 TBC1D2BQ9UPU7 963 aa17.56■□□□□ 0.4
EPHB4-206ENST00000487222 CYP46A1Q9Y6A2 500 aa17.56■□□□□ 0.4
EPHB4-206ENST00000487222 ESCO1Q5FWF5 840 aa17.56■□□□□ 0.4
EPHB4-206ENST00000487222 IL27Q8NEV9 243 aa17.56■□□□□ 0.4
EPHB4-206ENST00000487222 SULT6B1Q6IMI4 303 aa17.55■□□□□ 0.4
EPHB4-206ENST00000487222 DNAJC2Q99543 621 aaKnown RBP17.55■□□□□ 0.4
EPHB4-206ENST00000487222 RAPGEF3O95398 923 aa17.55■□□□□ 0.4
EPHB4-206ENST00000487222 MCM4P33991 863 aa17.55■□□□□ 0.4
EPHB4-206ENST00000487222 SLFN5Q08AF3 891 aa17.55■□□□□ 0.4
EPHB4-206ENST00000487222 CDK13Q14004 1512 aaKnown RBP17.55■□□□□ 0.4
EPHB4-206ENST00000487222 NAP1L1P55209 391 aaKnown RBP17.55■□□□□ 0.4
EPHB4-206ENST00000487222 CCP110O43303 1012 aa17.54■□□□□ 0.4
EPHB4-206ENST00000487222 ANKRD1Q15327 319 aa17.54■□□□□ 0.4
EPHB4-206ENST00000487222 MSH5O43196 834 aa17.54■□□□□ 0.4
EPHB4-206ENST00000487222 CCDC192P0DO97 292 aa17.54■□□□□ 0.4
EPHB4-206ENST00000487222 PRM3Q9NNZ6 103 aa17.54■□□□□ 0.4
EPHB4-206ENST00000487222 SRCIN1Q9C0H9 1055 aa17.54■□□□□ 0.4
EPHB4-206ENST00000487222 SMC2O95347 1197 aa17.53■□□□□ 0.4
EPHB4-206ENST00000487222 PROSER2Q86WR7 435 aaPredicted RBP17.53■□□□□ 0.4
EPHB4-206ENST00000487222 STK38Q15208 465 aa17.53■□□□□ 0.4
EPHB4-206ENST00000487222 CTDP1Q9Y5B0 961 aaPredicted RBP17.53■□□□□ 0.4
EPHB4-206ENST00000487222 ATAD2Q6PL18 1390 aa17.52■□□□□ 0.4
EPHB4-206ENST00000487222 DHX8Q14562 1220 aaKnown RBP17.52■□□□□ 0.39
EPHB4-206ENST00000487222 FMNL2Q96PY5 1086 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms