RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 ZNF771Q7L3S4 317 aaPredicted RBP9.34□□□□□ -0.91
COL6A4P1-202ENST00000487147 SMC5Q8IY18 1101 aa9.34□□□□□ -0.91
COL6A4P1-202ENST00000487147 ATP6V1DQ9Y5K8 247 aa9.34□□□□□ -0.91
COL6A4P1-202ENST00000487147 WDR62O43379 1518 aa9.33□□□□□ -0.92
COL6A4P1-202ENST00000487147 OFD1O75665 1012 aa9.33□□□□□ -0.92
COL6A4P1-202ENST00000487147 TMPOP42166 694 aaKnown RBP9.33□□□□□ -0.92
COL6A4P1-202ENST00000487147 DIAPH3Q9NSV4 1193 aa9.33□□□□□ -0.92
COL6A4P1-202ENST00000487147 SYNJ2O15056 1496 aa9.33□□□□□ -0.92
COL6A4P1-202ENST00000487147 BCORL1Q5H9F3 1711 aa9.33□□□□□ -0.92
COL6A4P1-202ENST00000487147 NRDCO43847 1150 aa9.33□□□□□ -0.92
COL6A4P1-202ENST00000487147 SASS6Q6UVJ0 657 aa9.33□□□□□ -0.92
COL6A4P1-202ENST00000487147 CABP2Q9NPB3 220 aa9.33□□□□□ -0.92
COL6A4P1-202ENST00000487147 SCAF11Q99590 1463 aaKnown RBP9.33□□□□□ -0.92
COL6A4P1-202ENST00000487147 RTF1Q92541 710 aaKnown RBP9.32□□□□□ -0.92
COL6A4P1-202ENST00000487147 PRDM10Q9NQV6 1147 aa9.32□□□□□ -0.92
COL6A4P1-202ENST00000487147 TBC1D9Q6ZT07 1266 aa9.32□□□□□ -0.92
COL6A4P1-202ENST00000487147 USP19O94966 1318 aa9.32□□□□□ -0.92
COL6A4P1-202ENST00000487147 HMOX1P09601 288 aa9.32□□□□□ -0.92
COL6A4P1-202ENST00000487147 ZNF521Q96K83 1311 aa9.32□□□□□ -0.92
COL6A4P1-202ENST00000487147 AFAP1Q8N556 730 aa9.32□□□□□ -0.92
COL6A4P1-202ENST00000487147 SOX12O15370 315 aa9.31□□□□□ -0.92
COL6A4P1-202ENST00000487147 STK31Q9BXU1 1019 aa9.31□□□□□ -0.92
COL6A4P1-202ENST00000487147 MINK1Q8N4C8 1332 aaPredicted RBP9.31□□□□□ -0.92
COL6A4P1-202ENST00000487147 VGFO15240 615 aaPredicted RBP9.31□□□□□ -0.92
COL6A4P1-202ENST00000487147 MCM2P49736 904 aa9.31□□□□□ -0.92
COL6A4P1-202ENST00000487147 ZSCAN23Q3MJ62 389 aa9.31□□□□□ -0.92
COL6A4P1-202ENST00000487147 NUP160Q12769 1436 aa9.31□□□□□ -0.92
COL6A4P1-202ENST00000487147 DYNC1I1O14576 645 aa9.31□□□□□ -0.92
COL6A4P1-202ENST00000487147 PRKAR2BP31323 418 aa9.31□□□□□ -0.92
COL6A4P1-202ENST00000487147 NUCB1Q02818 461 aa9.31□□□□□ -0.92
COL6A4P1-202ENST00000487147 RBM42Q9BTD8 480 aaKnown RBP9.31□□□□□ -0.92
COL6A4P1-202ENST00000487147 MCM5P33992 734 aa9.3□□□□□ -0.92
COL6A4P1-202ENST00000487147 TRMT2AQ8IZ69 625 aaKnown RBP9.3□□□□□ -0.92
COL6A4P1-202ENST00000487147 MBD5Q9P267 1494 aa9.3□□□□□ -0.92
COL6A4P1-202ENST00000487147 ESF1Q9H501 851 aaKnown RBP9.3□□□□□ -0.92
COL6A4P1-202ENST00000487147 NAP1L2Q9ULW6 460 aaPredicted RBP9.3□□□□□ -0.92
COL6A4P1-202ENST00000487147 LAMC3Q9Y6N6 1575 aa9.3□□□□□ -0.92
COL6A4P1-202ENST00000487147 ADGRL2O95490 1459 aa9.3□□□□□ -0.92
COL6A4P1-202ENST00000487147 TWISTNBQ3B726 338 aaPredicted RBP9.3□□□□□ -0.92
COL6A4P1-202ENST00000487147 FAM135AQ9P2D6 1515 aa9.3□□□□□ -0.92
COL6A4P1-202ENST00000487147 GAS2L2Q8NHY3 880 aa9.29□□□□□ -0.92
COL6A4P1-202ENST00000487147 ITSN2Q9NZM3 1697 aa9.29□□□□□ -0.92
COL6A4P1-202ENST00000487147 ERC2O15083 957 aa9.29□□□□□ -0.92
COL6A4P1-202ENST00000487147 DHX37Q8IY37 1157 aaKnown RBP9.29□□□□□ -0.92
COL6A4P1-202ENST00000487147 ZNF428Q96B54 188 aa9.29□□□□□ -0.92
COL6A4P1-202ENST00000487147 RBM27Q9P2N5 1060 aaKnown RBP9.29□□□□□ -0.92
COL6A4P1-202ENST00000487147 RAPGEF6Q8TEU7 1601 aa9.29□□□□□ -0.92
COL6A4P1-202ENST00000487147 TULP1O00294 542 aaPredicted RBP9.29□□□□□ -0.92
COL6A4P1-202ENST00000487147 RBM25P49756 843 aaKnown RBP9.29□□□□□ -0.92
COL6A4P1-202ENST00000487147 ZKSCAN5Q9Y2L8 839 aa9.29□□□□□ -0.92
COL6A4P1-202ENST00000487147 CHMP3Q9Y3E7 222 aa9.29□□□□□ -0.92
COL6A4P1-202ENST00000487147 KIF3AQ9Y496 699 aa9.29□□□□□ -0.92
COL6A4P1-202ENST00000487147 POLR3AO14802 1390 aaPredicted RBP9.29□□□□□ -0.92
COL6A4P1-202ENST00000487147 HS1BP3Q53T59 392 aa9.29□□□□□ -0.92
COL6A4P1-202ENST00000487147 HOMEZQ8IX15 550 aa9.29□□□□□ -0.92
COL6A4P1-202ENST00000487147 ZNF592Q92610 1267 aa9.29□□□□□ -0.92
COL6A4P1-202ENST00000487147 CCDC27Q2M243 656 aa9.28□□□□□ -0.92
COL6A4P1-202ENST00000487147 ALDH1L2Q3SY69 923 aa9.28□□□□□ -0.92
COL6A4P1-202ENST00000487147 GAS2L3Q86XJ1 694 aa9.28□□□□□ -0.92
COL6A4P1-202ENST00000487147 ZHX1Q9UKY1 873 aaPredicted RBP9.28□□□□□ -0.92
COL6A4P1-202ENST00000487147 A2MP01023 1474 aa9.28□□□□□ -0.92
COL6A4P1-202ENST00000487147 CARD14Q9BXL6 1004 aa9.28□□□□□ -0.92
COL6A4P1-202ENST00000487147 IFT57Q9NWB7 429 aa9.28□□□□□ -0.92
COL6A4P1-202ENST00000487147 SMC3Q9UQE7 1217 aa9.28□□□□□ -0.92
COL6A4P1-202ENST00000487147 KIF21AQ7Z4S6 1674 aa9.27□□□□□ -0.92
COL6A4P1-202ENST00000487147 PRIM1P49642 420 aaKnown RBP9.27□□□□□ -0.92
COL6A4P1-202ENST00000487147 FAM184AQ8NB25 1140 aa9.27□□□□□ -0.92
COL6A4P1-202ENST00000487147 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.27□□□□□ -0.92
COL6A4P1-202ENST00000487147 HTATSF1O43719 755 aaKnown RBP9.27□□□□□ -0.93
COL6A4P1-202ENST00000487147 CBX1P83916 185 aa9.27□□□□□ -0.93
COL6A4P1-202ENST00000487147 LETM1O95202 739 aaPredicted RBP9.27□□□□□ -0.93
COL6A4P1-202ENST00000487147 NPC1L1Q9UHC9 1359 aa9.27□□□□□ -0.93
COL6A4P1-202ENST00000487147 TPM3P06753 285 aa9.27□□□□□ -0.93
COL6A4P1-202ENST00000487147 ZMYM3Q14202 1370 aa9.26□□□□□ -0.93
COL6A4P1-202ENST00000487147 IFT140Q96RY7 1462 aa9.26□□□□□ -0.93
COL6A4P1-202ENST00000487147 VPS37CA5D8V6 355 aaPredicted RBP9.26□□□□□ -0.93
COL6A4P1-202ENST00000487147 FIBPO43427 364 aa9.26□□□□□ -0.93
COL6A4P1-202ENST00000487147 BRD2P25440 801 aaKnown RBP9.26□□□□□ -0.93
COL6A4P1-202ENST00000487147 LRSAM1Q6UWE0 723 aa9.26□□□□□ -0.93
COL6A4P1-202ENST00000487147 ADGRF5Q8IZF2 1346 aa9.26□□□□□ -0.93
COL6A4P1-202ENST00000487147 ABCC11Q96J66 1382 aa9.26□□□□□ -0.93
COL6A4P1-202ENST00000487147 SPC24Q8NBT2 197 aa9.26□□□□□ -0.93
COL6A4P1-202ENST00000487147 WDR33Q9C0J8 1336 aaKnown RBP9.26□□□□□ -0.93
COL6A4P1-202ENST00000487147 PDCL2Q8N4E4 241 aa9.26□□□□□ -0.93
COL6A4P1-202ENST00000487147 ZBTB40Q9NUA8 1239 aa9.26□□□□□ -0.93
COL6A4P1-202ENST00000487147 NOL7Q9UMY1 257 aaKnown RBP9.26□□□□□ -0.93
COL6A4P1-202ENST00000487147 EIF2AK4Q9P2K8 1649 aaKnown RBP9.25□□□□□ -0.93
COL6A4P1-202ENST00000487147 GOLGA6L19H0YKK7 550 aa9.25□□□□□ -0.93
COL6A4P1-202ENST00000487147 SHANK2Q9UPX8 1470 aa9.25□□□□□ -0.93
COL6A4P1-202ENST00000487147 C14orf37Q86TY3 774 aa9.25□□□□□ -0.93
COL6A4P1-202ENST00000487147 THUMPD2Q9BTF0 503 aaKnown RBP9.25□□□□□ -0.93
COL6A4P1-202ENST00000487147 GRIN2AQ12879 1464 aa9.25□□□□□ -0.93
COL6A4P1-202ENST00000487147 TERF1P54274 439 aa9.24□□□□□ -0.93
COL6A4P1-202ENST00000487147 USP25Q9UHP3 1055 aa9.24□□□□□ -0.93
COL6A4P1-202ENST00000487147 MAGI2Q86UL8 1455 aa9.24□□□□□ -0.93
COL6A4P1-202ENST00000487147 MRC2Q9UBG0 1479 aa9.24□□□□□ -0.93
COL6A4P1-202ENST00000487147 FCHSD2O94868 740 aa9.24□□□□□ -0.93
COL6A4P1-202ENST00000487147 PPP1R9BQ96SB3 815 aa9.24□□□□□ -0.93
COL6A4P1-202ENST00000487147 RBSNQ9H1K0 784 aa9.24□□□□□ -0.93
COL6A4P1-202ENST00000487147 RPAP2Q8IXW5 612 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms