RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 MYSM1Q5VVJ2 828 aa9.41□□□□□ -0.9
SNRNP40-205ENST00000486941 TRIM46Q7Z4K8 759 aa9.41□□□□□ -0.9
SNRNP40-205ENST00000486941 ZNF511Q8NB15 262 aa9.41□□□□□ -0.9
SNRNP40-205ENST00000486941 TRIM47Q96LD4 638 aa9.41□□□□□ -0.9
SNRNP40-205ENST00000486941 MAP10Q9P2G4 905 aa9.41□□□□□ -0.9
SNRNP40-205ENST00000486941 TLL2Q9Y6L7 1015 aa9.41□□□□□ -0.9
SNRNP40-205ENST00000486941 CSPP1Q1MSJ5 1256 aa9.4□□□□□ -0.9
SNRNP40-205ENST00000486941 BMP1P13497 986 aa9.38□□□□□ -0.91
SNRNP40-205ENST00000486941 C4orf48Q5BLP8 95 aa9.38□□□□□ -0.91
SNRNP40-205ENST00000486941 FBXO31Q5XUX0 539 aaPredicted RBP9.38□□□□□ -0.91
SNRNP40-205ENST00000486941 FOXJ1Q92949 421 aa9.38□□□□□ -0.91
SNRNP40-205ENST00000486941 ZBTB3Q9H5J0 574 aa9.38□□□□□ -0.91
SNRNP40-205ENST00000486941 LILRB3O75022 631 aa9.37□□□□□ -0.91
SNRNP40-205ENST00000486941 RTL5Q5HYW3 569 aaPredicted RBP9.37□□□□□ -0.91
SNRNP40-205ENST00000486941 PRPF38BQ5VTL8 546 aaKnown RBP9.37□□□□□ -0.91
SNRNP40-205ENST00000486941 WFS1O76024 890 aa9.36□□□□□ -0.91
SNRNP40-205ENST00000486941 CTHP32929 405 aa9.36□□□□□ -0.91
SNRNP40-205ENST00000486941 DIXDC1Q155Q3 683 aa9.36□□□□□ -0.91
SNRNP40-205ENST00000486941 KLF16Q9BXK1 252 aaPredicted RBP9.35□□□□□ -0.91
SNRNP40-205ENST00000486941 CAPN5O15484 640 aaPredicted RBP9.34□□□□□ -0.91
SNRNP40-205ENST00000486941 MPNDQ8N594 471 aa9.34□□□□□ -0.91
SNRNP40-205ENST00000486941 WASF2Q9Y6W5 498 aa9.34□□□□□ -0.91
SNRNP40-205ENST00000486941 VARSP26640 1264 aaKnown RBP9.33□□□□□ -0.92
SNRNP40-205ENST00000486941 TUSC1Q2TAM9 212 aa9.33□□□□□ -0.92
SNRNP40-205ENST00000486941 SENP2Q9HC62 589 aa9.33□□□□□ -0.92
SNRNP40-205ENST00000486941 TERTO14746 1132 aaKnown RBP9.32□□□□□ -0.92
SNRNP40-205ENST00000486941 NNTQ13423 1086 aa9.31□□□□□ -0.92
SNRNP40-205ENST00000486941 TIMP2P16035 220 aa9.3□□□□□ -0.92
SNRNP40-205ENST00000486941 GRM5P41594 1212 aa9.3□□□□□ -0.92
SNRNP40-205ENST00000486941 CDK15Q96Q40 435 aa9.3□□□□□ -0.92
SNRNP40-205ENST00000486941 POLR3EQ9NVU0 708 aa9.3□□□□□ -0.92
SNRNP40-205ENST00000486941 NR3C2P08235 984 aa9.29□□□□□ -0.92
SNRNP40-205ENST00000486941 KIFC2Q96AC6 838 aa9.29□□□□□ -0.92
SNRNP40-205ENST00000486941 ZFP42Q96MM3 310 aa9.28□□□□□ -0.92
SNRNP40-205ENST00000486941 NUTM2BA6NNL0 878 aaPredicted RBP9.27□□□□□ -0.93
SNRNP40-205ENST00000486941 NUTM2EB1AL46 878 aaPredicted RBP9.27□□□□□ -0.93
SNRNP40-205ENST00000486941 WIPF1O43516 503 aa9.27□□□□□ -0.93
SNRNP40-205ENST00000486941 CLK2P49760 499 aaKnown RBP9.27□□□□□ -0.93
SNRNP40-205ENST00000486941 NUTM2DQ5VT03 806 aaPredicted RBP9.27□□□□□ -0.93
SNRNP40-205ENST00000486941 SH3RF1Q7Z6J0 888 aa9.27□□□□□ -0.93
SNRNP40-205ENST00000486941 NUTM2AQ8IVF1 878 aaPredicted RBP9.27□□□□□ -0.93
SNRNP40-205ENST00000486941 TSC1Q92574 1164 aa9.27□□□□□ -0.93
SNRNP40-205ENST00000486941 ADH1CP00326 375 aa9.26□□□□□ -0.93
SNRNP40-205ENST00000486941 FAM174AQ8TBP5 190 aa9.26□□□□□ -0.93
SNRNP40-205ENST00000486941 ZFAND3Q9H8U3 227 aa9.26□□□□□ -0.93
SNRNP40-205ENST00000486941 GPBP1L1Q9HC44 474 aaPredicted RBP9.26□□□□□ -0.93
SNRNP40-205ENST00000486941 PLEKHG3A1L390 1219 aa9.25□□□□□ -0.93
SNRNP40-205ENST00000486941 WDR4P57081 412 aaKnown RBP9.25□□□□□ -0.93
SNRNP40-205ENST00000486941 CTDSPL2Q05D32 466 aa9.25□□□□□ -0.93
SNRNP40-205ENST00000486941 PROCA1Q8NCQ7 364 aaPredicted RBP9.25□□□□□ -0.93
SNRNP40-205ENST00000486941 C1QTNF2Q9BXJ5 285 aa9.25□□□□□ -0.93
SNRNP40-205ENST00000486941 VEGFBP49765 207 aa9.24□□□□□ -0.93
SNRNP40-205ENST00000486941 ITPKCQ96DU7 683 aa9.24□□□□□ -0.93
SNRNP40-205ENST00000486941 SOBPA7XYQ1 873 aa9.23□□□□□ -0.93
SNRNP40-205ENST00000486941 ARID5BQ14865 1188 aa9.23□□□□□ -0.93
SNRNP40-205ENST00000486941 SH3BP5LQ7L8J4 393 aa9.23□□□□□ -0.93
SNRNP40-205ENST00000486941 FAM117AQ9C073 453 aa9.23□□□□□ -0.93
SNRNP40-205ENST00000486941 LORP23490 312 aaPredicted RBP9.22□□□□□ -0.93
SNRNP40-205ENST00000486941 MRPL14Q6P1L8 145 aaKnown RBP9.22□□□□□ -0.93
SNRNP40-205ENST00000486941 LRRN4Q8WUT4 740 aa9.22□□□□□ -0.93
SNRNP40-205ENST00000486941 PURBQ96QR8 312 aaKnown RBP9.22□□□□□ -0.93
SNRNP40-205ENST00000486941 NXF1Q9UBU9 619 aaKnown RBP9.22□□□□□ -0.93
SNRNP40-205ENST00000486941 KDM4CQ9H3R0 1056 aa9.21□□□□□ -0.94
SNRNP40-205ENST00000486941 ZIC2O95409 532 aaPredicted RBP9.2□□□□□ -0.94
SNRNP40-205ENST00000486941 AGERQ15109 404 aa9.2□□□□□ -0.94
SNRNP40-205ENST00000486941 BPHLQ86WA6 291 aaPredicted RBP9.2□□□□□ -0.94
SNRNP40-205ENST00000486941 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.2□□□□□ -0.94
SNRNP40-205ENST00000486941 ERBB4Q15303 1308 aa9.2□□□□□ -0.94
SNRNP40-205ENST00000486941 OCSTAMPQ9BR26 566 aa9.19□□□□□ -0.94
SNRNP40-205ENST00000486941 RSPH6AQ9H0K4 717 aa9.19□□□□□ -0.94
SNRNP40-205ENST00000486941 GMPRP36959 345 aa9.18□□□□□ -0.94
SNRNP40-205ENST00000486941 NR5A1Q13285 461 aa9.18□□□□□ -0.94
SNRNP40-205ENST00000486941 SKIV2LQ15477 1246 aaKnown RBP9.18□□□□□ -0.94
SNRNP40-205ENST00000486941 H3BM21 787 aa9.17□□□□□ -0.94
SNRNP40-205ENST00000486941 TRMT44Q8IYL2 757 aaKnown RBP9.17□□□□□ -0.94
SNRNP40-205ENST00000486941 HELBQ8NG08 1087 aaPredicted RBP9.17□□□□□ -0.94
SNRNP40-205ENST00000486941 ERFEQ4G0M1 354 aa9.16□□□□□ -0.94
SNRNP40-205ENST00000486941 SH3D19Q5HYK7 790 aa9.16□□□□□ -0.94
SNRNP40-205ENST00000486941 MAGEB6P1A0A0J9YX57 407 aa9.15□□□□□ -0.94
SNRNP40-205ENST00000486941 NR6A1Q15406 480 aa9.15□□□□□ -0.94
SNRNP40-205ENST00000486941 PPP2R2DQ66LE6 453 aa9.15□□□□□ -0.94
SNRNP40-205ENST00000486941 EPS8L1Q8TE68 723 aa9.15□□□□□ -0.94
SNRNP40-205ENST00000486941 FSHRP23945 695 aa9.14□□□□□ -0.95
SNRNP40-205ENST00000486941 C6orf118Q5T5N4 469 aa9.14□□□□□ -0.95
SNRNP40-205ENST00000486941 ARMC2Q8NEN0 867 aa9.14□□□□□ -0.95
SNRNP40-205ENST00000486941 CARD14Q9BXL6 1004 aa9.14□□□□□ -0.95
SNRNP40-205ENST00000486941 MAP4K5Q9Y4K4 846 aa9.14□□□□□ -0.95
SNRNP40-205ENST00000486941 NBPF14Q5TI25 921 aa9.13□□□□□ -0.95
SNRNP40-205ENST00000486941 NPAS3Q8IXF0 933 aa9.13□□□□□ -0.95
SNRNP40-205ENST00000486941 MEIOBQ8N635 442 aa9.13□□□□□ -0.95
SNRNP40-205ENST00000486941 SCARF1Q14162 830 aa9.12□□□□□ -0.95
SNRNP40-205ENST00000486941 VASH1Q7L8A9 365 aaPredicted RBP9.12□□□□□ -0.95
SNRNP40-205ENST00000486941 HMX1Q9NP08 348 aaPredicted RBP9.12□□□□□ -0.95
SNRNP40-205ENST00000486941 STK17AQ9UEE5 414 aa9.11□□□□□ -0.95
SNRNP40-205ENST00000486941 FKBPLQ9UIM3 349 aa9.11□□□□□ -0.95
SNRNP40-205ENST00000486941 INSM1Q01101 510 aaPredicted RBP9.1□□□□□ -0.95
SNRNP40-205ENST00000486941 PDXDC2PQ6P474 469 aa9.1□□□□□ -0.95
SNRNP40-205ENST00000486941 LINC00528Q8N1L1 170 aa9.1□□□□□ -0.95
SNRNP40-205ENST00000486941 SLC16A10Q8TF71 515 aa9.1□□□□□ -0.95
SNRNP40-205ENST00000486941 DNMT3LQ9UJW3 386 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms