RNA–Protein interactions for RNA: ENST00000486361.5

LIMK1-206, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 569 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-206ENST00000486361 ATAD2Q6PL18 1390 aa27.85■■■□□ 2.05
LIMK1-206ENST00000486361 TMC1Q8TDI8 760 aa27.84■■■□□ 2.05
LIMK1-206ENST00000486361 ALS2Q96Q42 1657 aa27.83■■■□□ 2.05
LIMK1-206ENST00000486361 ABTB2Q8N961 1025 aa27.81■■■□□ 2.04
LIMK1-206ENST00000486361 SLC12A5Q9H2X9 1139 aa27.81■■■□□ 2.04
LIMK1-206ENST00000486361 USP21Q9UK80 565 aa27.8■■■□□ 2.04
LIMK1-206ENST00000486361 FNBP4Q8N3X1 1017 aaPredicted RBP27.79■■■□□ 2.04
LIMK1-206ENST00000486361 QTRT2Q9H974 415 aaKnown RBP27.79■■■□□ 2.04
LIMK1-206ENST00000486361 USP6P35125 1406 aa27.78■■■□□ 2.04
LIMK1-206ENST00000486361 TMF1P82094 1093 aa27.77■■■□□ 2.04
LIMK1-206ENST00000486361 ZNF692Q9BU19 519 aaPredicted RBP27.77■■■□□ 2.04
LIMK1-206ENST00000486361 PUS7Q96PZ0 661 aaKnown RBP27.75■■■□□ 2.03
LIMK1-206ENST00000486361 FAM83GA6ND36 823 aa27.74■■■□□ 2.03
LIMK1-206ENST00000486361 SLC24A1O60721 1099 aa27.74■■■□□ 2.03
LIMK1-206ENST00000486361 KTN1Q86UP2 1357 aaKnown RBP27.73■■■□□ 2.03
LIMK1-206ENST00000486361 ABCA3Q99758 1704 aa27.73■■■□□ 2.03
LIMK1-206ENST00000486361 MARF1Q9Y4F3 1742 aaKnown RBP27.73■■■□□ 2.03
LIMK1-206ENST00000486361 CPSF1Q10570 1443 aaKnown RBP27.73■■■□□ 2.03
LIMK1-206ENST00000486361 TTC21BQ7Z4L5 1316 aa27.72■■■□□ 2.03
LIMK1-206ENST00000486361 HSPA5P11021 654 aaKnown RBP27.72■■■□□ 2.03
LIMK1-206ENST00000486361 RXRBP28702 533 aa27.72■■■□□ 2.03
LIMK1-206ENST00000486361 SSH2Q76I76 1423 aa27.72■■■□□ 2.03
LIMK1-206ENST00000486361 NLRP6P59044 892 aa27.71■■■□□ 2.03
LIMK1-206ENST00000486361 EIF4G2P78344 907 aaKnown RBP eCLIP27.71■■■□□ 2.03
LIMK1-206ENST00000486361 NLRP13Q86W25 1043 aa27.71■■■□□ 2.03
LIMK1-206ENST00000486361 BRD4O60885 1362 aaPredicted RBP27.71■■■□□ 2.03
LIMK1-206ENST00000486361 BCL9LQ86UU0 1499 aa27.7■■■□□ 2.03
LIMK1-206ENST00000486361 CD163L1Q9NR16 1453 aa27.7■■■□□ 2.03
LIMK1-206ENST00000486361 ZC3H6P61129 1189 aaKnown RBP27.7■■■□□ 2.02
LIMK1-206ENST00000486361 HDGFL2Q7Z4V5 671 aaPredicted RBP27.69■■■□□ 2.02
LIMK1-206ENST00000486361 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.69■■■□□ 2.02
LIMK1-206ENST00000486361 UNC5CLQ8IV45 518 aa27.68■■■□□ 2.02
LIMK1-206ENST00000486361 TRPC5Q9UL62 973 aaPredicted RBP27.68■■■□□ 2.02
LIMK1-206ENST00000486361 AKAP12Q02952 1782 aa27.68■■■□□ 2.02
LIMK1-206ENST00000486361 SOCS7O14512 581 aa27.67■■■□□ 2.02
LIMK1-206ENST00000486361 TERF2IPQ9NYB0 399 aa27.67■■■□□ 2.02
LIMK1-206ENST00000486361 CRYBG1Q9Y4K1 1723 aa27.67■■■□□ 2.02
LIMK1-206ENST00000486361 SLIT2O94813 1529 aa27.67■■■□□ 2.02
LIMK1-206ENST00000486361 RBM6P78332 1123 aaKnown RBP27.66■■■□□ 2.02
LIMK1-206ENST00000486361 CHRNA2Q15822 529 aa27.66■■■□□ 2.02
LIMK1-206ENST00000486361 PRDM11Q9NQV5 511 aa27.66■■■□□ 2.02
LIMK1-206ENST00000486361 ZRANB1Q9UGI0 708 aa27.66■■■□□ 2.02
LIMK1-206ENST00000486361 A0A1W2PP64 1363 aa27.65■■■□□ 2.02
LIMK1-206ENST00000486361 USP19O94966 1318 aa27.65■■■□□ 2.02
LIMK1-206ENST00000486361 KIAA0232Q92628 1395 aa27.64■■■□□ 2.02
LIMK1-206ENST00000486361 GCP02774 474 aa27.64■■■□□ 2.02
LIMK1-206ENST00000486361 BTG4Q9NY30 223 aa27.64■■■□□ 2.02
LIMK1-206ENST00000486361 ATRNO75882 1429 aa27.64■■■□□ 2.02
LIMK1-206ENST00000486361 CDCA8Q53HL2 280 aa27.63■■■□□ 2.01
LIMK1-206ENST00000486361 POLR3GLQ9BT43 218 aa27.63■■■□□ 2.01
LIMK1-206ENST00000486361 TTC21AQ8NDW8 1320 aa27.63■■■□□ 2.01
LIMK1-206ENST00000486361 NME9Q86XW9 330 aa27.62■■■□□ 2.01
LIMK1-206ENST00000486361 PHRF1Q9P1Y6 1649 aaKnown RBP27.62■■■□□ 2.01
LIMK1-206ENST00000486361 ZBTB7CA1YPR0 619 aa27.61■■■□□ 2.01
LIMK1-206ENST00000486361 PIK3C2AO00443 1686 aa27.61■■■□□ 2.01
LIMK1-206ENST00000486361 SOX12O15370 315 aa27.6■■■□□ 2.01
LIMK1-206ENST00000486361 MON2Q7Z3U7 1717 aa27.59■■■□□ 2.01
LIMK1-206ENST00000486361 GJD4Q96KN9 370 aaPredicted RBP27.59■■■□□ 2.01
LIMK1-206ENST00000486361 NINLQ9Y2I6 1382 aa27.59■■■□□ 2.01
LIMK1-206ENST00000486361 PLCH1Q4KWH8 1693 aa27.59■■■□□ 2.01
LIMK1-206ENST00000486361 NRKQ7Z2Y5 1582 aa27.58■■■□□ 2.01
LIMK1-206ENST00000486361 CCDC9Q9Y3X0 531 aaKnown RBP27.58■■■□□ 2.01
LIMK1-206ENST00000486361 EDC4Q6P2E9 1401 aaKnown RBP27.56■■■□□ 2
LIMK1-206ENST00000486361 COL14A1Q05707 1796 aaKnown RBP27.55■■■□□ 2
LIMK1-206ENST00000486361 VPS72Q15906 364 aa27.55■■■□□ 2
LIMK1-206ENST00000486361 ANKRD36BQ8N2N9 1353 aa27.54■■■□□ 2
LIMK1-206ENST00000486361 SLIT3O75094 1523 aa27.53■■■□□ 2
LIMK1-206ENST00000486361 RGS12O14924 1447 aa27.53■■■□□ 2
LIMK1-206ENST00000486361 C11orf95C9JLR9 678 aaPredicted RBP27.53■■■□□ 2
LIMK1-206ENST00000486361 STRN4Q9NRL3 753 aa27.53■■■□□ 2
LIMK1-206ENST00000486361 CPDO75976 1380 aa27.52■■■□□ 2
LIMK1-206ENST00000486361 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.52■■■□□ 2
LIMK1-206ENST00000486361 NWD2Q9ULI1 1742 aa27.52■■■□□ 2
LIMK1-206ENST00000486361 USP31Q70CQ4 1352 aa27.5■■□□□ 1.99
LIMK1-206ENST00000486361 KCNH5Q8NCM2 988 aa27.5■■□□□ 1.99
LIMK1-206ENST00000486361 CDK12Q9NYV4 1490 aaPredicted RBP27.5■■□□□ 1.99
LIMK1-206ENST00000486361 EVA1CP58658 441 aa27.49■■□□□ 1.99
LIMK1-206ENST00000486361 NRAPQ86VF7 1730 aa27.48■■□□□ 1.99
LIMK1-206ENST00000486361 CARD14Q9BXL6 1004 aa27.48■■□□□ 1.99
LIMK1-206ENST00000486361 GLI3P10071 1580 aa27.48■■□□□ 1.99
LIMK1-206ENST00000486361 CAMTA1Q9Y6Y1 1673 aa27.46■■□□□ 1.99
LIMK1-206ENST00000486361 ARHGEF25Q86VW2 580 aa27.46■■□□□ 1.99
LIMK1-206ENST00000486361 MYOM1P52179 1685 aa27.45■■□□□ 1.98
LIMK1-206ENST00000486361 GGNBP2Q9H3C7 697 aa27.44■■□□□ 1.98
LIMK1-206ENST00000486361 AXIN2Q9Y2T1 843 aa27.44■■□□□ 1.98
LIMK1-206ENST00000486361 SPATA31A5Q5VU36 1347 aa27.43■■□□□ 1.98
LIMK1-206ENST00000486361 SPATA31A7Q8IWB4 1347 aa27.43■■□□□ 1.98
LIMK1-206ENST00000486361 FYB1O15117 783 aa27.43■■□□□ 1.98
LIMK1-206ENST00000486361 LARP1Q6PKG0 1096 aaKnown RBP27.43■■□□□ 1.98
LIMK1-206ENST00000486361 COG3Q96JB2 828 aa27.43■■□□□ 1.98
LIMK1-206ENST00000486361 AATKQ6ZMQ8 1374 aa27.43■■□□□ 1.98
LIMK1-206ENST00000486361 FBLN1P23142 703 aa27.42■■□□□ 1.98
LIMK1-206ENST00000486361 FAM98CQ17RN3 349 aaKnown RBP27.42■■□□□ 1.98
LIMK1-206ENST00000486361 USP35Q9P2H5 1018 aa27.42■■□□□ 1.98
LIMK1-206ENST00000486361 NFAT5O94916 1531 aa27.41■■□□□ 1.98
LIMK1-206ENST00000486361 SEPT12Q8IYM1 358 aa27.41■■□□□ 1.98
LIMK1-206ENST00000486361 OVOS2A0A0J9YW53 1432 aa27.41■■□□□ 1.98
LIMK1-206ENST00000486361 OVOS2Q6IE36 1432 aa27.41■■□□□ 1.98
LIMK1-206ENST00000486361 LMO7Q8WWI1 1683 aa27.4■■□□□ 1.98
LIMK1-206ENST00000486361 A0A0G2JS52 829 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms