RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 AMOTL1Q8IY63 956 aa10.54□□□□□ -0.72
GABRE-209ENST00000486255 GIMAP7Q8NHV1 300 aa10.54□□□□□ -0.72
GABRE-209ENST00000486255 SMARCE1Q969G3 411 aa10.54□□□□□ -0.72
GABRE-209ENST00000486255 KRI1Q8N9T8 703 aaKnown RBP10.54□□□□□ -0.72
GABRE-209ENST00000486255 RRP9O43818 475 aaKnown RBP10.54□□□□□ -0.72
GABRE-209ENST00000486255 INTS3Q68E01 1043 aaKnown RBP10.54□□□□□ -0.72
GABRE-209ENST00000486255 IL27Q8NEV9 243 aa10.54□□□□□ -0.72
GABRE-209ENST00000486255 TRIM5Q9C035 493 aa10.54□□□□□ -0.72
GABRE-209ENST00000486255 RNF20Q5VTR2 975 aa10.54□□□□□ -0.72
GABRE-209ENST00000486255 NFXL1Q6ZNB6 911 aa10.54□□□□□ -0.72
GABRE-209ENST00000486255 KIF3BO15066 747 aa10.53□□□□□ -0.72
GABRE-209ENST00000486255 TRAK2O60296 914 aa10.53□□□□□ -0.72
GABRE-209ENST00000486255 RNF214Q8ND24 703 aa10.53□□□□□ -0.72
GABRE-209ENST00000486255 ERLIN2O94905 339 aa10.53□□□□□ -0.72
GABRE-209ENST00000486255 ABCC5O15440 1437 aa10.53□□□□□ -0.72
GABRE-209ENST00000486255 CEP170Q5SW79 1584 aa10.53□□□□□ -0.72
GABRE-209ENST00000486255 ZFYVE27Q5T4F4 411 aa10.53□□□□□ -0.72
GABRE-209ENST00000486255 E9PSI1 815 aa10.53□□□□□ -0.72
GABRE-209ENST00000486255 MAPK8IP2Q13387 824 aaPredicted RBP10.53□□□□□ -0.72
GABRE-209ENST00000486255 RRP7AQ9Y3A4 280 aaKnown RBP10.53□□□□□ -0.72
GABRE-209ENST00000486255 ERICH4A6NGS2 130 aa10.52□□□□□ -0.72
GABRE-209ENST00000486255 EVA1CP58658 441 aa10.52□□□□□ -0.73
GABRE-209ENST00000486255 ARHGEF11O15085 1522 aa10.52□□□□□ -0.73
GABRE-209ENST00000486255 EIF3JO75822 258 aaKnown RBP10.52□□□□□ -0.73
GABRE-209ENST00000486255 C22orf23Q9BZE7 217 aa10.52□□□□□ -0.73
GABRE-209ENST00000486255 COG6Q9Y2V7 657 aa10.52□□□□□ -0.73
GABRE-209ENST00000486255 STAC3Q96MF2 364 aa10.52□□□□□ -0.73
GABRE-209ENST00000486255 ENOX2Q16206 610 aaKnown RBP10.52□□□□□ -0.73
GABRE-209ENST00000486255 CAVIN1Q6NZI2 390 aaKnown RBP10.52□□□□□ -0.73
GABRE-209ENST00000486255 BCL2L13Q9BXK5 485 aa10.52□□□□□ -0.73
GABRE-209ENST00000486255 OFD1O75665 1012 aa10.51□□□□□ -0.73
GABRE-209ENST00000486255 NEFHP12036 1026 aa10.51□□□□□ -0.73
GABRE-209ENST00000486255 CTDP1Q9Y5B0 961 aaPredicted RBP10.51□□□□□ -0.73
GABRE-209ENST00000486255 KIAA1107Q9UPP5 1409 aa10.51□□□□□ -0.73
GABRE-209ENST00000486255 RAD21O60216 631 aa10.51□□□□□ -0.73
GABRE-209ENST00000486255 ERICH2A1L162 156 aa10.51□□□□□ -0.73
GABRE-209ENST00000486255 NOL10Q9BSC4 688 aaKnown RBP10.51□□□□□ -0.73
GABRE-209ENST00000486255 CENPHQ9H3R5 247 aa10.51□□□□□ -0.73
GABRE-209ENST00000486255 ZBED9Q6R2W3 1325 aa10.51□□□□□ -0.73
GABRE-209ENST00000486255 CNKSR2Q8WXI2 1034 aa10.51□□□□□ -0.73
GABRE-209ENST00000486255 TRIM34Q9BYJ4 488 aa10.51□□□□□ -0.73
GABRE-209ENST00000486255 SAFBQ15424 915 aaKnown RBP eCLIP10.51□□□□□ -0.73
GABRE-209ENST00000486255 SEPT7Q16181 437 aaKnown RBP10.51□□□□□ -0.73
GABRE-209ENST00000486255 SPC24Q8NBT2 197 aa10.51□□□□□ -0.73
GABRE-209ENST00000486255 ANKRD18AQ8IVF6 992 aa10.5□□□□□ -0.73
GABRE-209ENST00000486255 IFIT2P09913 472 aaKnown RBP10.5□□□□□ -0.73
GABRE-209ENST00000486255 DDX19BQ9UMR2 479 aa10.5□□□□□ -0.73
GABRE-209ENST00000486255 TRDNQ13061 729 aa10.5□□□□□ -0.73
GABRE-209ENST00000486255 ANKRD62A6NC57 917 aa10.5□□□□□ -0.73
GABRE-209ENST00000486255 FILIP1LQ4L180 1135 aa10.5□□□□□ -0.73
GABRE-209ENST00000486255 CCDC43Q96MW1 224 aaKnown RBP10.5□□□□□ -0.73
GABRE-209ENST00000486255 TERF2IPQ9NYB0 399 aa10.5□□□□□ -0.73
GABRE-209ENST00000486255 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.5□□□□□ -0.73
GABRE-209ENST00000486255 ATP10BO94823 1461 aa10.5□□□□□ -0.73
GABRE-209ENST00000486255 GPATCH8Q9UKJ3 1502 aaKnown RBP10.5□□□□□ -0.73
GABRE-209ENST00000486255 ERLIN1O75477 346 aa10.5□□□□□ -0.73
GABRE-209ENST00000486255 DHX16O60231 1041 aaKnown RBP10.49□□□□□ -0.73
GABRE-209ENST00000486255 RABEP1Q15276 862 aa10.49□□□□□ -0.73
GABRE-209ENST00000486255 CLASRPQ8N2M8 674 aaKnown RBP10.49□□□□□ -0.73
GABRE-209ENST00000486255 MAGEC2Q9UBF1 373 aaPredicted RBP10.49□□□□□ -0.73
GABRE-209ENST00000486255 CCDC112Q8NEF3 446 aa10.49□□□□□ -0.73
GABRE-209ENST00000486255 KIF7Q2M1P5 1343 aa10.48□□□□□ -0.73
GABRE-209ENST00000486255 FAM193AP78312 1265 aa10.48□□□□□ -0.73
GABRE-209ENST00000486255 CCDC27Q2M243 656 aa10.48□□□□□ -0.73
GABRE-209ENST00000486255 BRMS1Q9HCU9 246 aa10.48□□□□□ -0.73
GABRE-209ENST00000486255 NUTM2BA6NNL0 878 aaPredicted RBP10.47□□□□□ -0.73
GABRE-209ENST00000486255 NUTM2EB1AL46 878 aaPredicted RBP10.47□□□□□ -0.73
GABRE-209ENST00000486255 MBD3O95983 291 aa10.47□□□□□ -0.73
GABRE-209ENST00000486255 AEBP1Q8IUX7 1158 aa10.47□□□□□ -0.73
GABRE-209ENST00000486255 NUTM2AQ8IVF1 878 aaPredicted RBP10.47□□□□□ -0.73
GABRE-209ENST00000486255 DHX8Q14562 1220 aaKnown RBP10.47□□□□□ -0.73
GABRE-209ENST00000486255 CCDC181Q5TID7 509 aa10.47□□□□□ -0.73
GABRE-209ENST00000486255 SDF4Q9BRK5 362 aa10.47□□□□□ -0.73
GABRE-209ENST00000486255 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.47□□□□□ -0.73
GABRE-209ENST00000486255 WASHC2CQ9Y4E1 1318 aa10.46□□□□□ -0.73
GABRE-209ENST00000486255 AMPHP49418 695 aa10.46□□□□□ -0.73
GABRE-209ENST00000486255 PRPF40AO75400 957 aaKnown RBP10.46□□□□□ -0.73
GABRE-209ENST00000486255 RBM33Q96EV2 1170 aaKnown RBP10.46□□□□□ -0.73
GABRE-209ENST00000486255 ABCC2Q92887 1545 aa10.46□□□□□ -0.74
GABRE-209ENST00000486255 GTF2E1P29083 439 aaPredicted RBP10.46□□□□□ -0.74
GABRE-209ENST00000486255 SHANK2Q9UPX8 1470 aa10.46□□□□□ -0.74
GABRE-209ENST00000486255 ELL2O00472 640 aaPredicted RBP10.46□□□□□ -0.74
GABRE-209ENST00000486255 TICAM2Q86XR7 235 aa10.46□□□□□ -0.74
GABRE-209ENST00000486255 LRRCC1Q9C099 1032 aa10.46□□□□□ -0.74
GABRE-209ENST00000486255 CDC45O75419 566 aa10.45□□□□□ -0.74
GABRE-209ENST00000486255 BRPF1P55201 1214 aaPredicted RBP10.45□□□□□ -0.74
GABRE-209ENST00000486255 NINLQ9Y2I6 1382 aa10.45□□□□□ -0.74
GABRE-209ENST00000486255 TAX1BP1Q86VP1 789 aa10.45□□□□□ -0.74
GABRE-209ENST00000486255 DZIP1LQ8IYY4 767 aaKnown RBP10.45□□□□□ -0.74
GABRE-209ENST00000486255 GPATCH11Q8N954 259 aa10.45□□□□□ -0.74
GABRE-209ENST00000486255 PRDM10Q9NQV6 1147 aa10.45□□□□□ -0.74
GABRE-209ENST00000486255 NCOA1Q15788 1441 aa10.45□□□□□ -0.74
GABRE-209ENST00000486255 KINO60870 393 aaKnown RBP10.44□□□□□ -0.74
GABRE-209ENST00000486255 CCAR1Q8IX12 1150 aaKnown RBP10.44□□□□□ -0.74
GABRE-209ENST00000486255 GRPEL1Q9HAV7 217 aa10.44□□□□□ -0.74
GABRE-209ENST00000486255 CCDC102AQ96A19 550 aa10.44□□□□□ -0.74
GABRE-209ENST00000486255 C9orf78Q9NZ63 289 aaPredicted RBP10.44□□□□□ -0.74
GABRE-209ENST00000486255 PSMA5P28066 241 aa10.44□□□□□ -0.74
GABRE-209ENST00000486255 SYCP1Q15431 976 aa10.44□□□□□ -0.74
GABRE-209ENST00000486255 EZRP15311 586 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms