RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 CDCA7LQ96GN5 454 aa15.75■□□□□ 0.11
PKP4-213ENST00000486254 NKTRP30414 1462 aaKnown RBP15.75■□□□□ 0.11
PKP4-213ENST00000486254 APAF1O14727 1248 aa15.75■□□□□ 0.11
PKP4-213ENST00000486254 CDK12Q9NYV4 1490 aaPredicted RBP15.74■□□□□ 0.11
PKP4-213ENST00000486254 ANKARQ7Z5J8 1434 aa15.74■□□□□ 0.11
PKP4-213ENST00000486254 PLEKHG3A1L390 1219 aa15.73■□□□□ 0.11
PKP4-213ENST00000486254 IRX6P78412 446 aaPredicted RBP15.73■□□□□ 0.11
PKP4-213ENST00000486254 GGNBP2Q9H3C7 697 aa15.73■□□□□ 0.11
PKP4-213ENST00000486254 NALCNQ8IZF0 1738 aa15.72■□□□□ 0.11
PKP4-213ENST00000486254 LRRC7Q96NW7 1537 aa15.72■□□□□ 0.11
PKP4-213ENST00000486254 SALL2Q9Y467 1007 aaPredicted RBP15.71■□□□□ 0.11
PKP4-213ENST00000486254 PRR36Q9H6K5 1346 aa15.71■□□□□ 0.11
PKP4-213ENST00000486254 CHD2O14647 1828 aaKnown RBP15.71■□□□□ 0.1
PKP4-213ENST00000486254 TNNT2P45379 298 aaPredicted RBP15.7■□□□□ 0.1
PKP4-213ENST00000486254 WDR63Q8IWG1 891 aa15.7■□□□□ 0.1
PKP4-213ENST00000486254 CCDC146Q8IYE0 955 aa15.7■□□□□ 0.1
PKP4-213ENST00000486254 PNNQ9H307 717 aaKnown RBP15.7■□□□□ 0.1
PKP4-213ENST00000486254 MAP2P11137 1827 aaKnown RBP15.7■□□□□ 0.1
PKP4-213ENST00000486254 WWC1Q8IX03 1113 aa15.7■□□□□ 0.1
PKP4-213ENST00000486254 AMOTL2Q9Y2J4 779 aa15.7■□□□□ 0.1
PKP4-213ENST00000486254 USP6P35125 1406 aa15.69■□□□□ 0.1
PKP4-213ENST00000486254 SSH2Q76I76 1423 aa15.69■□□□□ 0.1
PKP4-213ENST00000486254 FMN2Q9NZ56 1722 aa15.68■□□□□ 0.1
PKP4-213ENST00000486254 USP54Q70EL1 1684 aa15.68■□□□□ 0.1
PKP4-213ENST00000486254 OVOS2A0A0J9YW53 1432 aa15.68■□□□□ 0.1
PKP4-213ENST00000486254 OVOS2Q6IE36 1432 aa15.68■□□□□ 0.1
PKP4-213ENST00000486254 TCP11L2Q8N4U5 519 aa15.67■□□□□ 0.1
PKP4-213ENST00000486254 SLC26A8Q96RN1 970 aa15.67■□□□□ 0.1
PKP4-213ENST00000486254 SENP3-EIF4A1A0A087X0R7 540 aa15.66■□□□□ 0.1
PKP4-213ENST00000486254 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.66■□□□□ 0.1
PKP4-213ENST00000486254 TSHZ2Q9NRE2 1034 aa15.66■□□□□ 0.1
PKP4-213ENST00000486254 TTC21AQ8NDW8 1320 aa15.66■□□□□ 0.1
PKP4-213ENST00000486254 DIAPH1O60610 1272 aaKnown RBP15.66■□□□□ 0.1
PKP4-213ENST00000486254 U2AF1L5P0DN76 240 aaPredicted RBP15.66■□□□□ 0.1
PKP4-213ENST00000486254 U2AF1Q01081 240 aaKnown RBP eCLIP15.66■□□□□ 0.1
PKP4-213ENST00000486254 ANKLE2Q86XL3 938 aa15.66■□□□□ 0.1
PKP4-213ENST00000486254 PLEKHF1Q96S99 279 aa15.66■□□□□ 0.1
PKP4-213ENST00000486254 POLKQ9UBT6 870 aa15.65■□□□□ 0.1
PKP4-213ENST00000486254 USP31Q70CQ4 1352 aa15.64■□□□□ 0.09
PKP4-213ENST00000486254 NWD1Q149M9 1564 aa15.64■□□□□ 0.09
PKP4-213ENST00000486254 IL16Q14005 1332 aa15.64■□□□□ 0.09
PKP4-213ENST00000486254 FCHSD2O94868 740 aa15.64■□□□□ 0.09
PKP4-213ENST00000486254 COG3Q96JB2 828 aa15.64■□□□□ 0.09
PKP4-213ENST00000486254 CT47B1P0C2W7 299 aaPredicted RBP15.63■□□□□ 0.09
PKP4-213ENST00000486254 TTC21BQ7Z4L5 1316 aa15.63■□□□□ 0.09
PKP4-213ENST00000486254 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.62■□□□□ 0.09
PKP4-213ENST00000486254 CCDC136Q96JN2 1154 aa15.62■□□□□ 0.09
PKP4-213ENST00000486254 ACEP12821 1306 aa15.62■□□□□ 0.09
PKP4-213ENST00000486254 B4GALNT3Q6L9W6 998 aa15.62■□□□□ 0.09
PKP4-213ENST00000486254 NME9Q86XW9 330 aa15.61■□□□□ 0.09
PKP4-213ENST00000486254 MYH16Q9H6N6 1097 aa15.61■□□□□ 0.09
PKP4-213ENST00000486254 SPINK5Q9NQ38 1064 aaPredicted RBP15.61■□□□□ 0.09
PKP4-213ENST00000486254 MAPK8IP3Q9UPT6 1336 aa15.6■□□□□ 0.09
PKP4-213ENST00000486254 NPHP4O75161 1426 aaPredicted RBP15.59■□□□□ 0.09
PKP4-213ENST00000486254 ADGRL3Q9HAR2 1447 aa15.59■□□□□ 0.09
PKP4-213ENST00000486254 RGPD8O14715 1765 aaPredicted RBP15.58■□□□□ 0.09
PKP4-213ENST00000486254 KIF24Q5T7B8 1368 aa15.58■□□□□ 0.09
PKP4-213ENST00000486254 KCNA6P17658 529 aa15.58■□□□□ 0.09
PKP4-213ENST00000486254 TMPOP42166 694 aaKnown RBP15.58■□□□□ 0.09
PKP4-213ENST00000486254 IL13P35225 146 aa15.58■□□□□ 0.08
PKP4-213ENST00000486254 RSPH6AQ9H0K4 717 aa15.58■□□□□ 0.08
PKP4-213ENST00000486254 DMRT2Q9Y5R5 561 aa15.58■□□□□ 0.08
PKP4-213ENST00000486254 NCKAP5LQ9HCH0 1330 aa15.57■□□□□ 0.08
PKP4-213ENST00000486254 RGPD1P0DJD0 1748 aa15.57■□□□□ 0.08
PKP4-213ENST00000486254 U2SURPO15042 1029 aaKnown RBP15.57■□□□□ 0.08
PKP4-213ENST00000486254 EXOC6Q8TAG9 804 aa15.57■□□□□ 0.08
PKP4-213ENST00000486254 PIK3C2AO00443 1686 aa15.57■□□□□ 0.08
PKP4-213ENST00000486254 AAMPQ13685 434 aa15.56■□□□□ 0.08
PKP4-213ENST00000486254 PDE3AQ14432 1141 aa15.56■□□□□ 0.08
PKP4-213ENST00000486254 NEFMP07197 916 aa15.55■□□□□ 0.08
PKP4-213ENST00000486254 EMILIN1Q9Y6C2 1016 aa15.54■□□□□ 0.08
PKP4-213ENST00000486254 TRIM35Q9UPQ4 493 aa15.53■□□□□ 0.08
PKP4-213ENST00000486254 MARF1Q9Y4F3 1742 aaKnown RBP15.53■□□□□ 0.08
PKP4-213ENST00000486254 PEAK1Q9H792 1746 aa15.53■□□□□ 0.08
PKP4-213ENST00000486254 CALD1Q05682 793 aaKnown RBP15.53■□□□□ 0.08
PKP4-213ENST00000486254 RRP7AQ9Y3A4 280 aaKnown RBP15.53■□□□□ 0.08
PKP4-213ENST00000486254 PLPPR3Q6T4P5 718 aa15.52■□□□□ 0.07
PKP4-213ENST00000486254 CRBNQ96SW2 442 aa15.52■□□□□ 0.07
PKP4-213ENST00000486254 LMOD3Q0VAK6 560 aa15.51■□□□□ 0.07
PKP4-213ENST00000486254 NFE2L2Q16236 605 aa15.51■□□□□ 0.07
PKP4-213ENST00000486254 ZNF428Q96B54 188 aa15.51■□□□□ 0.07
PKP4-213ENST00000486254 SBNO1A3KN83 1393 aa15.51■□□□□ 0.07
PKP4-213ENST00000486254 PLIN1O60240 522 aa15.5■□□□□ 0.07
PKP4-213ENST00000486254 PRKAR2BP31323 418 aa15.5■□□□□ 0.07
PKP4-213ENST00000486254 RARSP54136 660 aaKnown RBP15.5■□□□□ 0.07
PKP4-213ENST00000486254 NEUROD2Q15784 382 aa15.5■□□□□ 0.07
PKP4-213ENST00000486254 ZRANB1Q9UGI0 708 aa15.5■□□□□ 0.07
PKP4-213ENST00000486254 ARHGEF10O15013 1369 aa15.5■□□□□ 0.07
PKP4-213ENST00000486254 FLT4P35916 1363 aa15.5■□□□□ 0.07
PKP4-213ENST00000486254 NGDNQ8NEJ9 315 aaKnown RBP15.49■□□□□ 0.07
PKP4-213ENST00000486254 FANCIQ9NVI1 1328 aa15.49■□□□□ 0.07
PKP4-213ENST00000486254 PHRF1Q9P1Y6 1649 aaKnown RBP15.49■□□□□ 0.07
PKP4-213ENST00000486254 RIPK4P57078 832 aa15.49■□□□□ 0.07
PKP4-213ENST00000486254 NCOA3Q9Y6Q9 1424 aa15.49■□□□□ 0.07
PKP4-213ENST00000486254 DLG5Q8TDM6 1919 aa15.48■□□□□ 0.07
PKP4-213ENST00000486254 RTL1A6NKG5 1358 aa15.48■□□□□ 0.07
PKP4-213ENST00000486254 KIF1AQ12756 1690 aa15.47■□□□□ 0.07
PKP4-213ENST00000486254 KDRP35968 1356 aa15.47■□□□□ 0.07
PKP4-213ENST00000486254 PPM1GO15355 546 aaPredicted RBP15.47■□□□□ 0.07
PKP4-213ENST00000486254 RRS1Q15050 365 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms