RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 HAP1P54257 671 aaPredicted RBP27.9■■■□□ 2.06
SNX5-213ENST00000486039 POLR3AO14802 1390 aaPredicted RBP27.89■■■□□ 2.06
SNX5-213ENST00000486039 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.89■■■□□ 2.05
SNX5-213ENST00000486039 ACEP12821 1306 aa27.89■■■□□ 2.05
SNX5-213ENST00000486039 ALS2Q96Q42 1657 aa27.88■■■□□ 2.05
SNX5-213ENST00000486039 CARD11Q9BXL7 1154 aa27.87■■■□□ 2.05
SNX5-213ENST00000486039 RALGAPBQ86X10 1494 aa27.87■■■□□ 2.05
SNX5-213ENST00000486039 PAK3O75914 559 aaPredicted RBP27.86■■■□□ 2.05
SNX5-213ENST00000486039 PPIP5K1Q6PFW1 1433 aa27.85■■■□□ 2.05
SNX5-213ENST00000486039 EVC2Q86UK5 1308 aa27.84■■■□□ 2.05
SNX5-213ENST00000486039 ABCA3Q99758 1704 aa27.84■■■□□ 2.05
SNX5-213ENST00000486039 GLI3P10071 1580 aa27.81■■■□□ 2.04
SNX5-213ENST00000486039 CABP1Q9NZU7 370 aa27.8■■■□□ 2.04
SNX5-213ENST00000486039 VPS72Q15906 364 aa27.78■■■□□ 2.04
SNX5-213ENST00000486039 FAM83GA6ND36 823 aa27.77■■■□□ 2.04
SNX5-213ENST00000486039 SBNO2Q9Y2G9 1366 aa27.76■■■□□ 2.03
SNX5-213ENST00000486039 NWD2Q9ULI1 1742 aa27.76■■■□□ 2.03
SNX5-213ENST00000486039 PLCH1Q4KWH8 1693 aa27.76■■■□□ 2.03
SNX5-213ENST00000486039 NUTM2GQ5VZR2 741 aa27.75■■■□□ 2.03
SNX5-213ENST00000486039 CRYBG1Q9Y4K1 1723 aa27.75■■■□□ 2.03
SNX5-213ENST00000486039 CLSPNQ9HAW4 1339 aa27.74■■■□□ 2.03
SNX5-213ENST00000486039 CCDC125Q86Z20 511 aa27.74■■■□□ 2.03
SNX5-213ENST00000486039 CCDC9Q9Y3X0 531 aaKnown RBP27.72■■■□□ 2.03
SNX5-213ENST00000486039 ABTB2Q8N961 1025 aa27.71■■■□□ 2.03
SNX5-213ENST00000486039 SEPT12Q8IYM1 358 aa27.7■■■□□ 2.02
SNX5-213ENST00000486039 USP6P35125 1406 aa27.69■■■□□ 2.02
SNX5-213ENST00000486039 ONECUT3O60422 494 aaPredicted RBP27.69■■■□□ 2.02
SNX5-213ENST00000486039 BRD4O60885 1362 aaPredicted RBP27.68■■■□□ 2.02
SNX5-213ENST00000486039 EP400Q96L91 3159 aa27.68■■■□□ 2.02
SNX5-213ENST00000486039 BTG4Q9NY30 223 aa27.67■■■□□ 2.02
SNX5-213ENST00000486039 TIMELESSQ9UNS1 1208 aa27.67■■■□□ 2.02
SNX5-213ENST00000486039 SSH2Q76I76 1423 aa27.67■■■□□ 2.02
SNX5-213ENST00000486039 BRWD3Q6RI45 1802 aa27.66■■■□□ 2.02
SNX5-213ENST00000486039 PHRF1Q9P1Y6 1649 aaKnown RBP27.66■■■□□ 2.02
SNX5-213ENST00000486039 COL14A1Q05707 1796 aaKnown RBP27.65■■■□□ 2.02
SNX5-213ENST00000486039 ST20-MTHFSA0A0A6YYL1 179 aa27.65■■■□□ 2.02
SNX5-213ENST00000486039 NRAPQ86VF7 1730 aa27.64■■■□□ 2.02
SNX5-213ENST00000486039 KIAA0232Q92628 1395 aa27.64■■■□□ 2.02
SNX5-213ENST00000486039 TESK2Q96S53 571 aa27.64■■■□□ 2.02
SNX5-213ENST00000486039 PRDM11Q9NQV5 511 aa27.64■■■□□ 2.02
SNX5-213ENST00000486039 USP19O94966 1318 aa27.64■■■□□ 2.01
SNX5-213ENST00000486039 ZC3H6P61129 1189 aaKnown RBP27.63■■■□□ 2.01
SNX5-213ENST00000486039 NLRP13Q86W25 1043 aa27.63■■■□□ 2.01
SNX5-213ENST00000486039 ZNF692Q9BU19 519 aaPredicted RBP27.63■■■□□ 2.01
SNX5-213ENST00000486039 CPSF1Q10570 1443 aaKnown RBP27.62■■■□□ 2.01
SNX5-213ENST00000486039 BLMP54132 1417 aaPredicted RBP27.61■■■□□ 2.01
SNX5-213ENST00000486039 CHRNA2Q15822 529 aa27.61■■■□□ 2.01
SNX5-213ENST00000486039 KRT27Q7Z3Y8 459 aa27.6■■■□□ 2.01
SNX5-213ENST00000486039 NRKQ7Z2Y5 1582 aa27.6■■■□□ 2.01
SNX5-213ENST00000486039 CCER1Q8TC90 406 aaPredicted RBP27.59■■■□□ 2.01
SNX5-213ENST00000486039 TTC21BQ7Z4L5 1316 aa27.59■■■□□ 2.01
SNX5-213ENST00000486039 AKAP12Q02952 1782 aa27.58■■■□□ 2.01
SNX5-213ENST00000486039 GCP02774 474 aa27.58■■■□□ 2.01
SNX5-213ENST00000486039 NLRP6P59044 892 aa27.58■■■□□ 2.01
SNX5-213ENST00000486039 FAM98CQ17RN3 349 aaKnown RBP27.58■■■□□ 2.01
SNX5-213ENST00000486039 ZRANB1Q9UGI0 708 aa27.58■■■□□ 2.01
SNX5-213ENST00000486039 A0A0G2JS52 829 aa27.57■■■□□ 2
SNX5-213ENST00000486039 MYT1Q01538 1121 aa27.57■■■□□ 2
SNX5-213ENST00000486039 PUS7Q96PZ0 661 aaKnown RBP27.57■■■□□ 2
SNX5-213ENST00000486039 TMC1Q8TDI8 760 aa27.56■■■□□ 2
SNX5-213ENST00000486039 KTN1Q86UP2 1357 aaKnown RBP27.56■■■□□ 2
SNX5-213ENST00000486039 USP47Q96K76 1375 aa27.56■■■□□ 2
SNX5-213ENST00000486039 CD163L1Q9NR16 1453 aa27.56■■■□□ 2
SNX5-213ENST00000486039 SLC12A5Q9H2X9 1139 aa27.55■■■□□ 2
SNX5-213ENST00000486039 SPATA31A5Q5VU36 1347 aa27.55■■■□□ 2
SNX5-213ENST00000486039 SPATA31A7Q8IWB4 1347 aa27.55■■■□□ 2
SNX5-213ENST00000486039 CPDO75976 1380 aa27.55■■■□□ 2
SNX5-213ENST00000486039 PIK3C2AO00443 1686 aa27.55■■■□□ 2
SNX5-213ENST00000486039 TTC21AQ8NDW8 1320 aa27.53■■■□□ 2
SNX5-213ENST00000486039 SF3B2Q13435 895 aaKnown RBP27.53■■■□□ 2
SNX5-213ENST00000486039 SLIT3O75094 1523 aa27.52■■■□□ 2
SNX5-213ENST00000486039 SLC24A1O60721 1099 aa27.51■■□□□ 1.99
SNX5-213ENST00000486039 DEFB132Q7Z7B7 95 aa27.51■■□□□ 1.99
SNX5-213ENST00000486039 MON2Q7Z3U7 1717 aa27.5■■□□□ 1.99
SNX5-213ENST00000486039 STRN4Q9NRL3 753 aa27.49■■□□□ 1.99
SNX5-213ENST00000486039 CAMTA1Q9Y6Y1 1673 aa27.49■■□□□ 1.99
SNX5-213ENST00000486039 HDGFL2Q7Z4V5 671 aaPredicted RBP27.48■■□□□ 1.99
SNX5-213ENST00000486039 LMO7Q8WWI1 1683 aa27.47■■□□□ 1.99
SNX5-213ENST00000486039 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.47■■□□□ 1.99
SNX5-213ENST00000486039 SPATA31A1Q5TZJ5 1347 aa27.46■■□□□ 1.99
SNX5-213ENST00000486039 A0A1W2PP64 1363 aa27.46■■□□□ 1.99
SNX5-213ENST00000486039 TMF1P82094 1093 aa27.45■■□□□ 1.98
SNX5-213ENST00000486039 TERF2IPQ9NYB0 399 aa27.45■■□□□ 1.98
SNX5-213ENST00000486039 THSD7AQ9UPZ6 1657 aa27.44■■□□□ 1.98
SNX5-213ENST00000486039 EVA1CP58658 441 aa27.44■■□□□ 1.98
SNX5-213ENST00000486039 ZBTB7CA1YPR0 619 aa27.43■■□□□ 1.98
SNX5-213ENST00000486039 NINLQ9Y2I6 1382 aa27.43■■□□□ 1.98
SNX5-213ENST00000486039 LARP1Q6PKG0 1096 aaKnown RBP27.42■■□□□ 1.98
SNX5-213ENST00000486039 NME9Q86XW9 330 aa27.42■■□□□ 1.98
SNX5-213ENST00000486039 KCNH5Q8NCM2 988 aa27.42■■□□□ 1.98
SNX5-213ENST00000486039 USP31Q70CQ4 1352 aa27.42■■□□□ 1.98
SNX5-213ENST00000486039 EDC4Q6P2E9 1401 aaKnown RBP27.41■■□□□ 1.98
SNX5-213ENST00000486039 AATKQ6ZMQ8 1374 aa27.41■■□□□ 1.98
SNX5-213ENST00000486039 SOX12O15370 315 aa27.4■■□□□ 1.98
SNX5-213ENST00000486039 BAG6P46379 1132 aa27.4■■□□□ 1.98
SNX5-213ENST00000486039 FAM182BQ5T319 152 aa27.4■■□□□ 1.98
SNX5-213ENST00000486039 ARHGEF25Q86VW2 580 aa27.4■■□□□ 1.98
SNX5-213ENST00000486039 COL5A2P05997 1499 aaPredicted RBP27.39■■□□□ 1.98
SNX5-213ENST00000486039 USP35Q9P2H5 1018 aa27.38■■□□□ 1.97
SNX5-213ENST00000486039 NFAT5O94916 1531 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms