RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 LORP23490 312 aaPredicted RBP10.45□□□□□ -0.74
GCFC2-209ENST00000486016 VEGFBP49765 207 aa10.45□□□□□ -0.74
GCFC2-209ENST00000486016 IRF7Q92985 503 aa10.44□□□□□ -0.74
GCFC2-209ENST00000486016 CFAP99D6REC4 459 aa10.43□□□□□ -0.74
GCFC2-209ENST00000486016 SIAH2O43255 324 aa10.43□□□□□ -0.74
GCFC2-209ENST00000486016 BMP1P13497 986 aa10.43□□□□□ -0.74
GCFC2-209ENST00000486016 HRCP23327 699 aa10.43□□□□□ -0.74
GCFC2-209ENST00000486016 RIC3Q7Z5B4 369 aa10.43□□□□□ -0.74
GCFC2-209ENST00000486016 PRPF38BQ5VTL8 546 aaKnown RBP10.42□□□□□ -0.74
GCFC2-209ENST00000486016 MYSM1Q5VVJ2 828 aa10.42□□□□□ -0.74
GCFC2-209ENST00000486016 LYPD8Q6UX82 237 aa10.42□□□□□ -0.74
GCFC2-209ENST00000486016 SH3BP2P78314 561 aa10.41□□□□□ -0.74
GCFC2-209ENST00000486016 KCNH2Q12809 1159 aa10.41□□□□□ -0.74
GCFC2-209ENST00000486016 TUSC1Q2TAM9 212 aa10.41□□□□□ -0.74
GCFC2-209ENST00000486016 LIMD1Q9UGP4 676 aa10.41□□□□□ -0.74
GCFC2-209ENST00000486016 TRIM46Q7Z4K8 759 aa10.4□□□□□ -0.74
GCFC2-209ENST00000486016 UNC93B1Q9H1C4 597 aa10.4□□□□□ -0.74
GCFC2-209ENST00000486016 CABLES1Q8TDN4 633 aa10.39□□□□□ -0.75
GCFC2-209ENST00000486016 ZBTB3Q9H5J0 574 aa10.39□□□□□ -0.75
GCFC2-209ENST00000486016 CAPN5O15484 640 aaPredicted RBP10.38□□□□□ -0.75
GCFC2-209ENST00000486016 ERBB4Q15303 1308 aa10.37□□□□□ -0.75
GCFC2-209ENST00000486016 H3BM21 787 aa10.37□□□□□ -0.75
GCFC2-209ENST00000486016 QPCTQ16769 361 aa10.37□□□□□ -0.75
GCFC2-209ENST00000486016 BAP1Q92560 729 aa10.37□□□□□ -0.75
GCFC2-209ENST00000486016 LILRB3O75022 631 aa10.36□□□□□ -0.75
GCFC2-209ENST00000486016 F12P00748 615 aaPredicted RBP10.36□□□□□ -0.75
GCFC2-209ENST00000486016 WASF2Q9Y6W5 498 aa10.36□□□□□ -0.75
GCFC2-209ENST00000486016 EHBP1Q8NDI1 1231 aa10.35□□□□□ -0.75
GCFC2-209ENST00000486016 PER1O15534 1290 aaPredicted RBP10.34□□□□□ -0.75
GCFC2-209ENST00000486016 ZNF511Q8NB15 262 aa10.34□□□□□ -0.75
GCFC2-209ENST00000486016 CSPP1Q1MSJ5 1256 aa10.33□□□□□ -0.76
GCFC2-209ENST00000486016 LINC01559Q495D7 138 aa10.33□□□□□ -0.76
GCFC2-209ENST00000486016 BCANQ96GW7 911 aa10.32□□□□□ -0.76
GCFC2-209ENST00000486016 MAP10Q9P2G4 905 aa10.32□□□□□ -0.76
GCFC2-209ENST00000486016 RTL5Q5HYW3 569 aaPredicted RBP10.31□□□□□ -0.76
GCFC2-209ENST00000486016 ZFP42Q96MM3 310 aa10.31□□□□□ -0.76
GCFC2-209ENST00000486016 SUZ12Q15022 739 aaKnown RBP10.3□□□□□ -0.76
GCFC2-209ENST00000486016 MPNDQ8N594 471 aa10.3□□□□□ -0.76
GCFC2-209ENST00000486016 SLC24A1O60721 1099 aa10.29□□□□□ -0.76
GCFC2-209ENST00000486016 VARSP26640 1264 aaKnown RBP10.29□□□□□ -0.76
GCFC2-209ENST00000486016 CLK2P49760 499 aaKnown RBP10.29□□□□□ -0.76
GCFC2-209ENST00000486016 CTHP32929 405 aa10.28□□□□□ -0.76
GCFC2-209ENST00000486016 RSPH6AQ9H0K4 717 aa10.28□□□□□ -0.76
GCFC2-209ENST00000486016 NUTM2BA6NNL0 878 aaPredicted RBP10.27□□□□□ -0.77
GCFC2-209ENST00000486016 NUTM2EB1AL46 878 aaPredicted RBP10.27□□□□□ -0.77
GCFC2-209ENST00000486016 NUTM2DQ5VT03 806 aaPredicted RBP10.27□□□□□ -0.77
GCFC2-209ENST00000486016 FBXO31Q5XUX0 539 aaPredicted RBP10.27□□□□□ -0.77
GCFC2-209ENST00000486016 NUTM2AQ8IVF1 878 aaPredicted RBP10.27□□□□□ -0.77
GCFC2-209ENST00000486016 GPBP1L1Q9HC44 474 aaPredicted RBP10.27□□□□□ -0.77
GCFC2-209ENST00000486016 POLR3EQ9NVU0 708 aa10.27□□□□□ -0.77
GCFC2-209ENST00000486016 FOXJ1Q92949 421 aa10.26□□□□□ -0.77
GCFC2-209ENST00000486016 KDM4CQ9H3R0 1056 aa10.26□□□□□ -0.77
GCFC2-209ENST00000486016 TLL2Q9Y6L7 1015 aa10.26□□□□□ -0.77
GCFC2-209ENST00000486016 C4orf48Q5BLP8 95 aa10.25□□□□□ -0.77
GCFC2-209ENST00000486016 FAM117AQ9C073 453 aa10.25□□□□□ -0.77
GCFC2-209ENST00000486016 PLEKHG3A1L390 1219 aa10.23□□□□□ -0.77
GCFC2-209ENST00000486016 SOBPA7XYQ1 873 aa10.23□□□□□ -0.77
GCFC2-209ENST00000486016 SKIV2LQ15477 1246 aaKnown RBP10.23□□□□□ -0.77
GCFC2-209ENST00000486016 CDK15Q96Q40 435 aa10.23□□□□□ -0.77
GCFC2-209ENST00000486016 VSIG8P0DPA2 414 aa10.22□□□□□ -0.77
GCFC2-209ENST00000486016 SH3D19Q5HYK7 790 aa10.22□□□□□ -0.77
GCFC2-209ENST00000486016 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.22□□□□□ -0.77
GCFC2-209ENST00000486016 KLF16Q9BXK1 252 aaPredicted RBP10.22□□□□□ -0.77
GCFC2-209ENST00000486016 MRPL14Q6P1L8 145 aaKnown RBP10.21□□□□□ -0.77
GCFC2-209ENST00000486016 KCTD17Q8N5Z5 321 aa10.21□□□□□ -0.77
GCFC2-209ENST00000486016 TSC1Q92574 1164 aa10.21□□□□□ -0.77
GCFC2-209ENST00000486016 PURBQ96QR8 312 aaKnown RBP10.21□□□□□ -0.77
GCFC2-209ENST00000486016 CTDSPL2Q05D32 466 aa10.2□□□□□ -0.78
GCFC2-209ENST00000486016 SCARF1Q14162 830 aa10.2□□□□□ -0.78
GCFC2-209ENST00000486016 SH3RF1Q7Z6J0 888 aa10.2□□□□□ -0.78
GCFC2-209ENST00000486016 PROCA1Q8NCQ7 364 aaPredicted RBP10.2□□□□□ -0.78
GCFC2-209ENST00000486016 HELBQ8NG08 1087 aaPredicted RBP10.2□□□□□ -0.78
GCFC2-209ENST00000486016 FAM174AQ8TBP5 190 aa10.2□□□□□ -0.78
GCFC2-209ENST00000486016 NNTQ13423 1086 aa10.19□□□□□ -0.78
GCFC2-209ENST00000486016 DDRGK1Q96HY6 314 aa10.19□□□□□ -0.78
GCFC2-209ENST00000486016 C1QTNF2Q9BXJ5 285 aa10.19□□□□□ -0.78
GCFC2-209ENST00000486016 ADH1CP00326 375 aa10.18□□□□□ -0.78
GCFC2-209ENST00000486016 GRM5P41594 1212 aa10.18□□□□□ -0.78
GCFC2-209ENST00000486016 PPP2R2DQ66LE6 453 aa10.18□□□□□ -0.78
GCFC2-209ENST00000486016 SH3BP5LQ7L8J4 393 aa10.18□□□□□ -0.78
GCFC2-209ENST00000486016 KCNMA1Q12791 1236 aa10.17□□□□□ -0.78
GCFC2-209ENST00000486016 BPHLQ86WA6 291 aaPredicted RBP10.17□□□□□ -0.78
GCFC2-209ENST00000486016 ARMC2Q8NEN0 867 aa10.17□□□□□ -0.78
GCFC2-209ENST00000486016 TIMP2P16035 220 aa10.16□□□□□ -0.78
GCFC2-209ENST00000486016 WDR4P57081 412 aaKnown RBP10.15□□□□□ -0.78
GCFC2-209ENST00000486016 NR3C2P08235 984 aa10.14□□□□□ -0.79
GCFC2-209ENST00000486016 LRRN4Q8WUT4 740 aa10.14□□□□□ -0.79
GCFC2-209ENST00000486016 GSK3AP49840 483 aa10.13□□□□□ -0.79
GCFC2-209ENST00000486016 TRMT44Q8IYL2 757 aaKnown RBP10.13□□□□□ -0.79
GCFC2-209ENST00000486016 NR5A1Q13285 461 aa10.12□□□□□ -0.79
GCFC2-209ENST00000486016 NBPF14Q5TI25 921 aa10.12□□□□□ -0.79
GCFC2-209ENST00000486016 GPKOWQ92917 476 aaPredicted RBP eCLIP10.12□□□□□ -0.79
GCFC2-209ENST00000486016 AGERQ15109 404 aa10.11□□□□□ -0.79
GCFC2-209ENST00000486016 MAP4K5Q9Y4K4 846 aa10.11□□□□□ -0.79
GCFC2-209ENST00000486016 MAN1A2O60476 641 aa10.1□□□□□ -0.79
GCFC2-209ENST00000486016 ARID5BQ14865 1188 aa10.1□□□□□ -0.79
GCFC2-209ENST00000486016 TMEM151AQ8N4L1 468 aa10.1□□□□□ -0.79
GCFC2-209ENST00000486016 C6orf118Q5T5N4 469 aa10.09□□□□□ -0.79
GCFC2-209ENST00000486016 PPFIA3O75145 1194 aa10.08□□□□□ -0.8
GCFC2-209ENST00000486016 PDXDC2PQ6P474 469 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms