RNA–Protein interactions for RNA: ENST00000485987.1

LMO7-211, Transcript of LIM domain 7, humanhuman

TSL 5

Gene LMO7, Length 1,087 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-211ENST00000485987 ZSWIM6Q9HCJ5 1215 aa12.35□□□□□ -0.43
LMO7-211ENST00000485987 RNF17Q9BXT8 1623 aaKnown RBP12.35□□□□□ -0.43
LMO7-211ENST00000485987 KDM5DQ9BY66 1539 aa12.35□□□□□ -0.43
LMO7-211ENST00000485987 PRDM15P57071 1507 aaPredicted RBP12.34□□□□□ -0.43
LMO7-211ENST00000485987 FOSBP53539 338 aa12.34□□□□□ -0.43
LMO7-211ENST00000485987 NPDC1Q9NQX5 325 aaPredicted RBP12.34□□□□□ -0.43
LMO7-211ENST00000485987 MINK1Q8N4C8 1332 aaPredicted RBP12.34□□□□□ -0.43
LMO7-211ENST00000485987 MAP2K5Q13163 448 aa12.33□□□□□ -0.44
LMO7-211ENST00000485987 ZNF454Q8N9F8 522 aa12.33□□□□□ -0.44
LMO7-211ENST00000485987 UNC13BO14795 1591 aa12.33□□□□□ -0.44
LMO7-211ENST00000485987 IRF6O14896 467 aa12.32□□□□□ -0.44
LMO7-211ENST00000485987 TMEM132AQ24JP5 1023 aa12.32□□□□□ -0.44
LMO7-211ENST00000485987 CCER1Q8TC90 406 aaPredicted RBP12.32□□□□□ -0.44
LMO7-211ENST00000485987 DEPDC5O75140 1603 aa12.32□□□□□ -0.44
LMO7-211ENST00000485987 ABCC3O15438 1527 aa12.32□□□□□ -0.44
LMO7-211ENST00000485987 LMTK2Q8IWU2 1503 aa12.32□□□□□ -0.44
LMO7-211ENST00000485987 ARHGAP31Q2M1Z3 1444 aa12.31□□□□□ -0.44
LMO7-211ENST00000485987 CEBPAP49715 358 aaPredicted RBP12.31□□□□□ -0.44
LMO7-211ENST00000485987 FBXW7Q969H0 707 aa12.31□□□□□ -0.44
LMO7-211ENST00000485987 CCDC102AQ96A19 550 aa12.31□□□□□ -0.44
LMO7-211ENST00000485987 GPBP1L1Q9HC44 474 aaPredicted RBP12.3□□□□□ -0.44
LMO7-211ENST00000485987 ZC3H13Q5T200 1668 aaKnown RBP12.29□□□□□ -0.44
LMO7-211ENST00000485987 PZPP20742 1482 aa12.29□□□□□ -0.44
LMO7-211ENST00000485987 RPRD2Q5VT52 1461 aaKnown RBP12.29□□□□□ -0.44
LMO7-211ENST00000485987 SIGLEC1Q9BZZ2 1709 aa12.29□□□□□ -0.44
LMO7-211ENST00000485987 PDE4DQ08499 809 aa12.29□□□□□ -0.44
LMO7-211ENST00000485987 FBXO31Q5XUX0 539 aaPredicted RBP12.29□□□□□ -0.44
LMO7-211ENST00000485987 ZDHHC16Q969W1 377 aa12.29□□□□□ -0.44
LMO7-211ENST00000485987 SLC52A1Q9NWF4 448 aa12.29□□□□□ -0.44
LMO7-211ENST00000485987 LHX6Q9UPM6 363 aa12.29□□□□□ -0.44
LMO7-211ENST00000485987 VWDEQ8N2E2 1590 aa12.29□□□□□ -0.44
LMO7-211ENST00000485987 IQGAP3Q86VI3 1631 aa12.29□□□□□ -0.44
LMO7-211ENST00000485987 MROH1Q8NDA8 1641 aa12.29□□□□□ -0.44
LMO7-211ENST00000485987 ADAMTSL3P82987 1691 aa12.27□□□□□ -0.45
LMO7-211ENST00000485987 CLTCQ00610 1675 aaKnown RBP12.27□□□□□ -0.45
LMO7-211ENST00000485987 FAM205CA6NFA0 338 aa12.27□□□□□ -0.45
LMO7-211ENST00000485987 C6orf132Q5T0Z8 1188 aa12.27□□□□□ -0.45
LMO7-211ENST00000485987 HS3ST6Q96QI5 342 aa12.27□□□□□ -0.45
LMO7-211ENST00000485987 NPATQ14207 1427 aa12.27□□□□□ -0.45
LMO7-211ENST00000485987 PTPRMP28827 1452 aa12.27□□□□□ -0.45
LMO7-211ENST00000485987 MADDQ8WXG6 1647 aa12.26□□□□□ -0.45
LMO7-211ENST00000485987 FER1L4A9Z1Z3 1794 aa12.26□□□□□ -0.45
LMO7-211ENST00000485987 ADAM33Q9BZ11 813 aa12.26□□□□□ -0.45
LMO7-211ENST00000485987 TNRQ92752 1358 aa12.26□□□□□ -0.45
LMO7-211ENST00000485987 EFCAB6Q5THR3 1501 aa12.26□□□□□ -0.45
LMO7-211ENST00000485987 TET3O43151 1660 aa12.26□□□□□ -0.45
LMO7-211ENST00000485987 DHX57Q6P158 1386 aaKnown RBP12.25□□□□□ -0.45
LMO7-211ENST00000485987 MROH2AA6NES4 1674 aa12.24□□□□□ -0.45
LMO7-211ENST00000485987 CAMSAP1Q5T5Y3 1602 aa12.24□□□□□ -0.45
LMO7-211ENST00000485987 RIMS1Q86UR5 1692 aaKnown RBP12.24□□□□□ -0.45
LMO7-211ENST00000485987 CCDC144AA2RUR9 1427 aa12.23□□□□□ -0.45
LMO7-211ENST00000485987 CLSPNQ9HAW4 1339 aa12.23□□□□□ -0.45
LMO7-211ENST00000485987 POTEB3A0JP26 581 aa12.23□□□□□ -0.45
LMO7-211ENST00000485987 HDGFP51858 240 aaKnown RBP12.23□□□□□ -0.45
LMO7-211ENST00000485987 POTEBQ6S5H4 581 aa12.23□□□□□ -0.45
LMO7-211ENST00000485987 KRTAP3-3Q9BYR6 98 aa12.23□□□□□ -0.45
LMO7-211ENST00000485987 KRTAP3-2Q9BYR7 98 aa12.23□□□□□ -0.45
LMO7-211ENST00000485987 KDM4CQ9H3R0 1056 aa12.23□□□□□ -0.45
LMO7-211ENST00000485987 CEP152O94986 1710 aa12.23□□□□□ -0.45
LMO7-211ENST00000485987 ERVK-7P63135 1459 aa12.22□□□□□ -0.45
LMO7-211ENST00000485987 PTPRTO14522 1441 aa12.22□□□□□ -0.45
LMO7-211ENST00000485987 HOXB1P14653 301 aaPredicted RBP12.22□□□□□ -0.45
LMO7-211ENST00000485987 IDI1Q13907 227 aa12.22□□□□□ -0.45
LMO7-211ENST00000485987 THEMISQ8N1K5 641 aaPredicted RBP12.22□□□□□ -0.45
LMO7-211ENST00000485987 ANKRD30BQ9BXX2 1392 aa12.21□□□□□ -0.45
LMO7-211ENST00000485987 NEUROD1Q13562 356 aa12.21□□□□□ -0.45
LMO7-211ENST00000485987 NOS1P29475 1434 aa12.2□□□□□ -0.46
LMO7-211ENST00000485987 ZNF326Q5BKZ1 582 aaKnown RBP12.2□□□□□ -0.46
LMO7-211ENST00000485987 NLRP1Q9C000 1473 aa12.2□□□□□ -0.46
LMO7-211ENST00000485987 UHRF1BP1Q6BDS2 1440 aa12.2□□□□□ -0.46
LMO7-211ENST00000485987 AMHR2Q16671 573 aa12.19□□□□□ -0.46
LMO7-211ENST00000485987 PPP4R3BQ5MIZ7 849 aa12.18□□□□□ -0.46
LMO7-211ENST00000485987 CERKQ8TCT0 537 aa12.18□□□□□ -0.46
LMO7-211ENST00000485987 EID1Q9Y6B2 187 aa12.18□□□□□ -0.46
LMO7-211ENST00000485987 E9PCH4 1651 aa12.18□□□□□ -0.46
LMO7-211ENST00000485987 C3P01024 1663 aa12.18□□□□□ -0.46
LMO7-211ENST00000485987 SPATA31D1Q6ZQQ2 1576 aa12.18□□□□□ -0.46
LMO7-211ENST00000485987 FAM161AQ3B820 660 aa12.17□□□□□ -0.46
LMO7-211ENST00000485987 RGL3Q3MIN7 710 aa12.17□□□□□ -0.46
LMO7-211ENST00000485987 PADI6Q6TGC4 694 aa12.17□□□□□ -0.46
LMO7-211ENST00000485987 IL27Q8NEV9 243 aa12.17□□□□□ -0.46
LMO7-211ENST00000485987 GTF3C3Q9Y5Q9 886 aa12.17□□□□□ -0.46
LMO7-211ENST00000485987 TRPM2O94759 1503 aa12.16□□□□□ -0.46
LMO7-211ENST00000485987 PLA2R1Q13018 1463 aa12.16□□□□□ -0.46
LMO7-211ENST00000485987 PSDA5PKW4 1024 aaPredicted RBP12.16□□□□□ -0.46
LMO7-211ENST00000485987 PARP9Q8IXQ6 854 aa12.16□□□□□ -0.46
LMO7-211ENST00000485987 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.16□□□□□ -0.46
LMO7-211ENST00000485987 SIN3AQ96ST3 1273 aa12.16□□□□□ -0.46
LMO7-211ENST00000485987 RPGRIP1LQ68CZ1 1315 aa12.15□□□□□ -0.46
LMO7-211ENST00000485987 PPP1R15AO75807 674 aaPredicted RBP12.15□□□□□ -0.46
LMO7-211ENST00000485987 STAC3Q96MF2 364 aa12.15□□□□□ -0.46
LMO7-211ENST00000485987 PREX1Q8TCU6 1659 aa12.15□□□□□ -0.46
LMO7-211ENST00000485987 COL9A1P20849 921 aa12.14□□□□□ -0.47
LMO7-211ENST00000485987 ANKLE2Q86XL3 938 aa12.14□□□□□ -0.47
LMO7-211ENST00000485987 PHOX2BQ99453 314 aa12.14□□□□□ -0.47
LMO7-211ENST00000485987 BCL2L12Q9HB09 334 aa12.14□□□□□ -0.47
LMO7-211ENST00000485987 TIMELESSQ9UNS1 1208 aa12.14□□□□□ -0.47
LMO7-211ENST00000485987 TONSLQ96HA7 1378 aa12.14□□□□□ -0.47
LMO7-211ENST00000485987 A2ML1A8K2U0 1454 aa12.14□□□□□ -0.47
LMO7-211ENST00000485987 TTLL12Q14166 644 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms