RNA–Protein interactions for RNA: ENST00000485946.1

PCCA-209, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 2

Gene PCCA, Length 1,789 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-209ENST00000485946 RIMS1Q86UR5 1692 aaKnown RBP8.11□□□□□ -1.11
PCCA-209ENST00000485946 FAM135AQ9P2D6 1515 aa8.11□□□□□ -1.11
PCCA-209ENST00000485946 MADDQ8WXG6 1647 aa8.1□□□□□ -1.11
PCCA-209ENST00000485946 NCOA2Q15596 1464 aa8.1□□□□□ -1.11
PCCA-209ENST00000485946 CARNS1A5YM72 827 aa8.1□□□□□ -1.11
PCCA-209ENST00000485946 VGFO15240 615 aaPredicted RBP8.1□□□□□ -1.11
PCCA-209ENST00000485946 OS9Q13438 667 aaPredicted RBP8.1□□□□□ -1.11
PCCA-209ENST00000485946 ILDR1Q86SU0 546 aaPredicted RBP8.1□□□□□ -1.11
PCCA-209ENST00000485946 FAM9BQ8IZU0 186 aa8.1□□□□□ -1.11
PCCA-209ENST00000485946 KIF12Q96FN5 646 aa8.1□□□□□ -1.11
PCCA-209ENST00000485946 SYCP2Q9BX26 1530 aa8.1□□□□□ -1.11
PCCA-209ENST00000485946 RTEL1-TNFRSF6BF6WH68 1400 aa8.1□□□□□ -1.11
PCCA-209ENST00000485946 MIA2Q96PC5 1412 aa8.1□□□□□ -1.11
PCCA-209ENST00000485946 ATP7AQ04656 1500 aa8.1□□□□□ -1.11
PCCA-209ENST00000485946 FOSBP53539 338 aa8.1□□□□□ -1.11
PCCA-209ENST00000485946 CFDP1Q9UEE9 299 aaPredicted RBP8.1□□□□□ -1.11
PCCA-209ENST00000485946 STK24Q9Y6E0 443 aa8.1□□□□□ -1.11
PCCA-209ENST00000485946 ARHGEF12Q9NZN5 1544 aa8.09□□□□□ -1.11
PCCA-209ENST00000485946 MAST1Q9Y2H9 1570 aa8.09□□□□□ -1.11
PCCA-209ENST00000485946 NEFMP07197 916 aa8.09□□□□□ -1.11
PCCA-209ENST00000485946 PREX1Q8TCU6 1659 aa8.08□□□□□ -1.12
PCCA-209ENST00000485946 MORC4Q8TE76 937 aa8.08□□□□□ -1.12
PCCA-209ENST00000485946 SECISBP2LQ93073 1101 aaKnown RBP8.08□□□□□ -1.12
PCCA-209ENST00000485946 CDCA7Q9BWT1 371 aaPredicted RBP8.08□□□□□ -1.12
PCCA-209ENST00000485946 ZNF330Q9Y3S2 320 aaPredicted RBP8.08□□□□□ -1.12
PCCA-209ENST00000485946 CROCC2H7BZ55 1655 aa8.08□□□□□ -1.12
PCCA-209ENST00000485946 SIGLEC1Q9BZZ2 1709 aa8.08□□□□□ -1.12
PCCA-209ENST00000485946 RASEFQ8IZ41 740 aa8.07□□□□□ -1.12
PCCA-209ENST00000485946 EVI5LQ96CN4 794 aa8.07□□□□□ -1.12
PCCA-209ENST00000485946 COG6Q9Y2V7 657 aa8.07□□□□□ -1.12
PCCA-209ENST00000485946 CNTLNQ9NXG0 1405 aa8.07□□□□□ -1.12
PCCA-209ENST00000485946 YEATS2Q9ULM3 1422 aa8.07□□□□□ -1.12
PCCA-209ENST00000485946 PTPRMP28827 1452 aa8.07□□□□□ -1.12
PCCA-209ENST00000485946 CCDC141Q6ZP82 1450 aa8.07□□□□□ -1.12
PCCA-209ENST00000485946 PLXNC1O60486 1568 aa8.07□□□□□ -1.12
PCCA-209ENST00000485946 PEX14O75381 377 aa8.07□□□□□ -1.12
PCCA-209ENST00000485946 MAP4K4O95819 1239 aaPredicted RBP8.07□□□□□ -1.12
PCCA-209ENST00000485946 PTMAP06454 111 aaKnown RBP8.07□□□□□ -1.12
PCCA-209ENST00000485946 PCMTD1Q96MG8 357 aaPredicted RBP8.07□□□□□ -1.12
PCCA-209ENST00000485946 KCNG1Q9UIX4 513 aa8.07□□□□□ -1.12
PCCA-209ENST00000485946 CAMSAP2Q08AD1 1489 aa8.07□□□□□ -1.12
PCCA-209ENST00000485946 EIF2AK4Q9P2K8 1649 aaKnown RBP8.07□□□□□ -1.12
PCCA-209ENST00000485946 ZNF16P17020 682 aaPredicted RBP8.06□□□□□ -1.12
PCCA-209ENST00000485946 ZC3H6P61129 1189 aaKnown RBP8.06□□□□□ -1.12
PCCA-209ENST00000485946 PARP9Q8IXQ6 854 aa8.06□□□□□ -1.12
PCCA-209ENST00000485946 TRAPPC8Q9Y2L5 1435 aa8.06□□□□□ -1.12
PCCA-209ENST00000485946 ZC3H13Q5T200 1668 aaKnown RBP8.05□□□□□ -1.12
PCCA-209ENST00000485946 MYOM3Q5VTT5 1437 aa8.05□□□□□ -1.12
PCCA-209ENST00000485946 SPAG9O60271 1321 aaKnown RBP8.05□□□□□ -1.12
PCCA-209ENST00000485946 TBC1D12O60347 775 aa8.05□□□□□ -1.12
PCCA-209ENST00000485946 ERCC3P19447 782 aa8.05□□□□□ -1.12
PCCA-209ENST00000485946 RBM46Q8TBY0 533 aaKnown RBP8.05□□□□□ -1.12
PCCA-209ENST00000485946 UBA5Q9GZZ9 404 aa8.05□□□□□ -1.12
PCCA-209ENST00000485946 ZBTB47Q9UFB7 747 aaPredicted RBP8.05□□□□□ -1.12
PCCA-209ENST00000485946 C3P01024 1663 aa8.05□□□□□ -1.12
PCCA-209ENST00000485946 MBD5Q9P267 1494 aa8.05□□□□□ -1.12
PCCA-209ENST00000485946 MAP3K13O43283 966 aa8.05□□□□□ -1.12
PCCA-209ENST00000485946 ATN1P54259 1190 aaPredicted RBP8.05□□□□□ -1.12
PCCA-209ENST00000485946 GPATCH3Q96I76 525 aa8.05□□□□□ -1.12
PCCA-209ENST00000485946 KLHL42Q9P2K6 505 aa8.05□□□□□ -1.12
PCCA-209ENST00000485946 NAP1L2Q9ULW6 460 aaPredicted RBP8.05□□□□□ -1.12
PCCA-209ENST00000485946 PPFIA4O75335 1185 aa8.04□□□□□ -1.12
PCCA-209ENST00000485946 AFAP1Q8N556 730 aa8.04□□□□□ -1.12
PCCA-209ENST00000485946 PBXIP1Q96AQ6 731 aa8.04□□□□□ -1.12
PCCA-209ENST00000485946 PTPN23Q9H3S7 1636 aa8.04□□□□□ -1.12
PCCA-209ENST00000485946 A2MP01023 1474 aa8.03□□□□□ -1.12
PCCA-209ENST00000485946 SHANK2Q9UPX8 1470 aa8.03□□□□□ -1.12
PCCA-209ENST00000485946 DNMT1P26358 1616 aaKnown RBP8.03□□□□□ -1.12
PCCA-209ENST00000485946 SF3A1Q15459 793 aaKnown RBP8.03□□□□□ -1.12
PCCA-209ENST00000485946 CCDC181Q5TID7 509 aa8.03□□□□□ -1.12
PCCA-209ENST00000485946 DPH6Q7L8W6 267 aa8.03□□□□□ -1.12
PCCA-209ENST00000485946 SMC5Q8IY18 1101 aa8.03□□□□□ -1.12
PCCA-209ENST00000485946 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.02□□□□□ -1.13
PCCA-209ENST00000485946 NAALADL2Q58DX5 795 aa8.02□□□□□ -1.13
PCCA-209ENST00000485946 SGIP1Q9BQI5 828 aa8.02□□□□□ -1.13
PCCA-209ENST00000485946 BMP2KQ9NSY1 1161 aaPredicted RBP8.02□□□□□ -1.13
PCCA-209ENST00000485946 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.02□□□□□ -1.131e-6■■□□□ 12.2
PCCA-209ENST00000485946 TSPY4P0CV99 314 aa8.02□□□□□ -1.13
PCCA-209ENST00000485946 TSPY10P0CW01 314 aa8.02□□□□□ -1.13
PCCA-209ENST00000485946 TIE1P35590 1138 aa8.02□□□□□ -1.13
PCCA-209ENST00000485946 DNAJC14Q6Y2X3 702 aaPredicted RBP8.02□□□□□ -1.13
PCCA-209ENST00000485946 ESF1Q9H501 851 aaKnown RBP8.02□□□□□ -1.13
PCCA-209ENST00000485946 METTL14Q9HCE5 456 aaKnown RBP8.02□□□□□ -1.13
PCCA-209ENST00000485946 TCOF1Q13428 1488 aaKnown RBP8.02□□□□□ -1.13
PCCA-209ENST00000485946 CLTCQ00610 1675 aaKnown RBP8.02□□□□□ -1.13
PCCA-209ENST00000485946 RNF17Q9BXT8 1623 aaKnown RBP8.01□□□□□ -1.13
PCCA-209ENST00000485946 CSB-PGBD3P0DP91 1061 aa8.01□□□□□ -1.13
PCCA-209ENST00000485946 HNRNPMP52272 730 aaKnown RBP eCLIP8.01□□□□□ -1.13
PCCA-209ENST00000485946 GSE1Q14687 1217 aa8.01□□□□□ -1.13
PCCA-209ENST00000485946 VTI1AQ96AJ9 217 aa8.01□□□□□ -1.13
PCCA-209ENST00000485946 MAGEC2Q9UBF1 373 aaPredicted RBP8.01□□□□□ -1.13
PCCA-209ENST00000485946 SBNO2Q9Y2G9 1366 aa8.01□□□□□ -1.13
PCCA-209ENST00000485946 HMGB1P1B2RPK0 211 aaPredicted RBP8□□□□□ -1.13
PCCA-209ENST00000485946 FOXD4Q12950 439 aaPredicted RBP8□□□□□ -1.13
PCCA-209ENST00000485946 LONRF3Q496Y0 759 aa8□□□□□ -1.13
PCCA-209ENST00000485946 WDR3Q9UNX4 943 aaKnown RBP eCLIP8□□□□□ -1.13
PCCA-209ENST00000485946 TRPC6Q9Y210 931 aa8□□□□□ -1.13
PCCA-209ENST00000485946 RPS6KL1Q9Y6S9 549 aa8□□□□□ -1.13
PCCA-209ENST00000485946 NPATQ14207 1427 aa8□□□□□ -1.13
PCCA-209ENST00000485946 DHX29Q7Z478 1369 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms