RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 SLC16A10Q8TF71 515 aa6.87□□□□□ -1.31
PRPF38B-205ENST00000485810 NPAS3Q8IXF0 933 aa6.86□□□□□ -1.31
PRPF38B-205ENST00000485810 MPNDQ8N594 471 aa6.86□□□□□ -1.31
PRPF38B-205ENST00000485810 KRI1Q8N9T8 703 aaKnown RBP6.86□□□□□ -1.31
PRPF38B-205ENST00000485810 ZNF511Q8NB15 262 aa6.86□□□□□ -1.31
PRPF38B-205ENST00000485810 ZC3H15Q8WU90 426 aaKnown RBP6.86□□□□□ -1.31
PRPF38B-205ENST00000485810 TIMP2P16035 220 aa6.85□□□□□ -1.31
PRPF38B-205ENST00000485810 SOBPA7XYQ1 873 aa6.84□□□□□ -1.31
PRPF38B-205ENST00000485810 NNTQ13423 1086 aa6.84□□□□□ -1.31
PRPF38B-205ENST00000485810 DESI1Q6ICB0 168 aa6.84□□□□□ -1.31
PRPF38B-205ENST00000485810 ZMYND10O75800 440 aa6.83□□□□□ -1.32
PRPF38B-205ENST00000485810 BARGINQ6ZT62 677 aa6.83□□□□□ -1.32
PRPF38B-205ENST00000485810 ZSCAN1Q8NBB4 408 aa6.83□□□□□ -1.32
PRPF38B-205ENST00000485810 IRF7Q92985 503 aa6.83□□□□□ -1.32
PRPF38B-205ENST00000485810 PCDHB15Q9Y5E8 787 aa6.83□□□□□ -1.32
PRPF38B-205ENST00000485810 VARSP26640 1264 aaKnown RBP6.82□□□□□ -1.32
PRPF38B-205ENST00000485810 MTMR2Q13614 643 aa6.82□□□□□ -1.32
PRPF38B-205ENST00000485810 AMHR2Q16671 573 aa6.82□□□□□ -1.32
PRPF38B-205ENST00000485810 MRPL14Q6P1L8 145 aaKnown RBP6.82□□□□□ -1.32
PRPF38B-205ENST00000485810 LYPD8Q6UX82 237 aa6.82□□□□□ -1.32
PRPF38B-205ENST00000485810 GIGYF2Q6Y7W6 1299 aaKnown RBP6.82□□□□□ -1.32
PRPF38B-205ENST00000485810 FOXJ1Q92949 421 aa6.82□□□□□ -1.32
PRPF38B-205ENST00000485810 CFAP99D6REC4 459 aa6.82□□□□□ -1.32
PRPF38B-205ENST00000485810 BCANQ96GW7 911 aa6.82□□□□□ -1.32
PRPF38B-205ENST00000485810 PURBQ96QR8 312 aaKnown RBP6.82□□□□□ -1.32
PRPF38B-205ENST00000485810 F12P00748 615 aaPredicted RBP6.81□□□□□ -1.32
PRPF38B-205ENST00000485810 WDR4P57081 412 aaKnown RBP6.81□□□□□ -1.32
PRPF38B-205ENST00000485810 C4orf48Q5BLP8 95 aa6.81□□□□□ -1.32
PRPF38B-205ENST00000485810 RSBN1LQ6PCB5 846 aaPredicted RBP6.81□□□□□ -1.32
PRPF38B-205ENST00000485810 CDK15Q96Q40 435 aa6.81□□□□□ -1.32
PRPF38B-205ENST00000485810 BEGAINQ9BUH8 593 aa6.81□□□□□ -1.32
PRPF38B-205ENST00000485810 TBC1D2Q9BYX2 928 aa6.81□□□□□ -1.32
PRPF38B-205ENST00000485810 MAP10Q9P2G4 905 aa6.81□□□□□ -1.32
PRPF38B-205ENST00000485810 PLEKHG3A1L390 1219 aa6.8□□□□□ -1.32
PRPF38B-205ENST00000485810 SPDYE5A6NIY4 337 aa6.8□□□□□ -1.32
PRPF38B-205ENST00000485810 HOMEZQ8IX15 550 aa6.8□□□□□ -1.32
PRPF38B-205ENST00000485810 ZFAND3Q9H8U3 227 aa6.8□□□□□ -1.32
PRPF38B-205ENST00000485810 SPTLC1O15269 473 aa6.79□□□□□ -1.32
PRPF38B-205ENST00000485810 ADH1CP00326 375 aa6.79□□□□□ -1.32
PRPF38B-205ENST00000485810 NR3C2P08235 984 aa6.79□□□□□ -1.32
PRPF38B-205ENST00000485810 VSIG8P0DPA2 414 aa6.79□□□□□ -1.32
PRPF38B-205ENST00000485810 GJA5P36382 358 aa6.79□□□□□ -1.32
PRPF38B-205ENST00000485810 GRM5P41594 1212 aa6.79□□□□□ -1.32
PRPF38B-205ENST00000485810 HRCP23327 699 aa6.78□□□□□ -1.32
PRPF38B-205ENST00000485810 TTLL12Q14166 644 aaPredicted RBP6.78□□□□□ -1.32
PRPF38B-205ENST00000485810 PER1O15534 1290 aaPredicted RBP6.77□□□□□ -1.33
PRPF38B-205ENST00000485810 CTHP32929 405 aa6.77□□□□□ -1.33
PRPF38B-205ENST00000485810 PARP9Q8IXQ6 854 aa6.77□□□□□ -1.33
PRPF38B-205ENST00000485810 CABLES1Q8TDN4 633 aa6.77□□□□□ -1.33
PRPF38B-205ENST00000485810 ITPKCQ96DU7 683 aa6.77□□□□□ -1.33
PRPF38B-205ENST00000485810 TIMELESSQ9UNS1 1208 aa6.77□□□□□ -1.33
PRPF38B-205ENST00000485810 SCARF1Q14162 830 aa6.76□□□□□ -1.33
PRPF38B-205ENST00000485810 FAM174AQ8TBP5 190 aa6.76□□□□□ -1.33
PRPF38B-205ENST00000485810 ZIC2O95409 532 aaPredicted RBP6.75□□□□□ -1.33
PRPF38B-205ENST00000485810 GSK3AP49840 483 aa6.74□□□□□ -1.33
PRPF38B-205ENST00000485810 SLC24A3Q9HC58 644 aa6.74□□□□□ -1.33
PRPF38B-205ENST00000485810 TRIM66O15016 1216 aa6.73□□□□□ -1.33
PRPF38B-205ENST00000485810 PPFIA3O75145 1194 aa6.73□□□□□ -1.33
PRPF38B-205ENST00000485810 ARID5BQ14865 1188 aa6.73□□□□□ -1.33
PRPF38B-205ENST00000485810 C6orf118Q5T5N4 469 aa6.73□□□□□ -1.33
PRPF38B-205ENST00000485810 RIC3Q7Z5B4 369 aa6.73□□□□□ -1.33
PRPF38B-205ENST00000485810 C1QTNF2Q9BXJ5 285 aa6.73□□□□□ -1.33
PRPF38B-205ENST00000485810 NR5A1Q13285 461 aa6.72□□□□□ -1.33
PRPF38B-205ENST00000485810 QPCTQ16769 361 aa6.72□□□□□ -1.33
PRPF38B-205ENST00000485810 ZBTB3Q9H5J0 574 aa6.72□□□□□ -1.33
PRPF38B-205ENST00000485810 LIMD1Q9UGP4 676 aa6.72□□□□□ -1.33
PRPF38B-205ENST00000485810 PRPF38BQ5VTL8 546 aaKnown RBP6.71□□□□□ -1.33
PRPF38B-205ENST00000485810 SH3RF1Q7Z6J0 888 aa6.71□□□□□ -1.33
PRPF38B-205ENST00000485810 MEIOBQ8N635 442 aa6.71□□□□□ -1.33
PRPF38B-205ENST00000485810 GPR161Q8N6U8 529 aaKnown RBP6.71□□□□□ -1.33
PRPF38B-205ENST00000485810 AK7Q96M32 723 aa6.71□□□□□ -1.33
PRPF38B-205ENST00000485810 SOS2Q07890 1332 aaPredicted RBP6.71□□□□□ -1.34
PRPF38B-205ENST00000485810 KRT76Q01546 638 aa6.7□□□□□ -1.34
PRPF38B-205ENST00000485810 DNMT3LQ9UJW3 386 aa6.7□□□□□ -1.34
PRPF38B-205ENST00000485810 DIXDC1Q155Q3 683 aa6.69□□□□□ -1.34
PRPF38B-205ENST00000485810 CSPP1Q1MSJ5 1256 aa6.69□□□□□ -1.34
PRPF38B-205ENST00000485810 MAN1A2O60476 641 aa6.69□□□□□ -1.34
PRPF38B-205ENST00000485810 LILRB3O75022 631 aa6.69□□□□□ -1.34
PRPF38B-205ENST00000485810 RTL5Q5HYW3 569 aaPredicted RBP6.69□□□□□ -1.34
PRPF38B-205ENST00000485810 MYSM1Q5VVJ2 828 aa6.69□□□□□ -1.34
PRPF38B-205ENST00000485810 SH3BP5LQ7L8J4 393 aa6.69□□□□□ -1.34
PRPF38B-205ENST00000485810 BPHLQ86WA6 291 aaPredicted RBP6.69□□□□□ -1.34
PRPF38B-205ENST00000485810 LINC00528Q8N1L1 170 aa6.69□□□□□ -1.34
PRPF38B-205ENST00000485810 PDE4DQ08499 809 aa6.68□□□□□ -1.34
PRPF38B-205ENST00000485810 KCNMA1Q12791 1236 aa6.68□□□□□ -1.34
PRPF38B-205ENST00000485810 BMP2P12643 396 aa6.67□□□□□ -1.34
PRPF38B-205ENST00000485810 AGERQ15109 404 aa6.67□□□□□ -1.34
PRPF38B-205ENST00000485810 TUSC1Q2TAM9 212 aa6.67□□□□□ -1.34
PRPF38B-205ENST00000485810 TPRNQ4KMQ1 711 aa6.67□□□□□ -1.34
PRPF38B-205ENST00000485810 TRMT44Q8IYL2 757 aaKnown RBP6.67□□□□□ -1.34
PRPF38B-205ENST00000485810 MAP4K5Q9Y4K4 846 aa6.67□□□□□ -1.34
PRPF38B-205ENST00000485810 FSHRP23945 695 aa6.66□□□□□ -1.34
PRPF38B-205ENST00000485810 FBXO31Q5XUX0 539 aaPredicted RBP6.64□□□□□ -1.35
PRPF38B-205ENST00000485810 TSC1Q92574 1164 aa6.64□□□□□ -1.35
PRPF38B-205ENST00000485810 CBLBQ13191 982 aa6.63□□□□□ -1.35
PRPF38B-205ENST00000485810 SUZ12Q15022 739 aaKnown RBP6.63□□□□□ -1.35
PRPF38B-205ENST00000485810 ERFEQ4G0M1 354 aa6.63□□□□□ -1.35
PRPF38B-205ENST00000485810 VASH1Q7L8A9 365 aaPredicted RBP6.63□□□□□ -1.35
PRPF38B-205ENST00000485810 KCTD17Q8N5Z5 321 aa6.63□□□□□ -1.35
PRPF38B-205ENST00000485810 FIGNL2A6NMB9 653 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms