RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 ZNF772Q68DY9 489 aaPredicted RBP22.89■■□□□ 1.25
DDR1-246ENST00000485023 NUTM2GQ5VZR2 741 aa22.88■■□□□ 1.25
DDR1-246ENST00000485023 ATAD2Q6PL18 1390 aa22.88■■□□□ 1.25
DDR1-246ENST00000485023 MARF1Q9Y4F3 1742 aaKnown RBP22.86■■□□□ 1.25
DDR1-246ENST00000485023 TESK2Q96S53 571 aa22.86■■□□□ 1.25
DDR1-246ENST00000485023 USP6P35125 1406 aa22.83■■□□□ 1.25
DDR1-246ENST00000485023 TMC1Q8TDI8 760 aa22.83■■□□□ 1.25
DDR1-246ENST00000485023 USP21Q9UK80 565 aa22.83■■□□□ 1.25
DDR1-246ENST00000485023 ABTB2Q8N961 1025 aa22.81■■□□□ 1.24
DDR1-246ENST00000485023 CRYBG1Q9Y4K1 1723 aa22.81■■□□□ 1.24
DDR1-246ENST00000485023 PHRF1Q9P1Y6 1649 aaKnown RBP22.79■■□□□ 1.24
DDR1-246ENST00000485023 FNBP4Q8N3X1 1017 aaPredicted RBP22.79■■□□□ 1.24
DDR1-246ENST00000485023 AKAP12Q02952 1782 aa22.78■■□□□ 1.24
DDR1-246ENST00000485023 QTRT2Q9H974 415 aaKnown RBP22.78■■□□□ 1.24
DDR1-246ENST00000485023 KTN1Q86UP2 1357 aaKnown RBP22.77■■□□□ 1.24
DDR1-246ENST00000485023 TMF1P82094 1093 aa22.77■■□□□ 1.24
DDR1-246ENST00000485023 SLC12A5Q9H2X9 1139 aa22.77■■□□□ 1.24
DDR1-246ENST00000485023 BCL9LQ86UU0 1499 aa22.77■■□□□ 1.24
DDR1-246ENST00000485023 PLCH1Q4KWH8 1693 aa22.77■■□□□ 1.24
DDR1-246ENST00000485023 CPSF1Q10570 1443 aaKnown RBP22.76■■□□□ 1.23
DDR1-246ENST00000485023 RXRBP28702 533 aa22.76■■□□□ 1.23
DDR1-246ENST00000485023 NRKQ7Z2Y5 1582 aa22.76■■□□□ 1.23
DDR1-246ENST00000485023 SSH2Q76I76 1423 aa22.75■■□□□ 1.23
DDR1-246ENST00000485023 CD163L1Q9NR16 1453 aa22.75■■□□□ 1.23
DDR1-246ENST00000485023 SLIT2O94813 1529 aa22.75■■□□□ 1.23
DDR1-246ENST00000485023 PIK3C2AO00443 1686 aa22.74■■□□□ 1.23
DDR1-246ENST00000485023 TTC21BQ7Z4L5 1316 aa22.74■■□□□ 1.23
DDR1-246ENST00000485023 BRD4O60885 1362 aaPredicted RBP22.74■■□□□ 1.23
DDR1-246ENST00000485023 MON2Q7Z3U7 1717 aa22.74■■□□□ 1.23
DDR1-246ENST00000485023 FAM83GA6ND36 823 aa22.73■■□□□ 1.23
DDR1-246ENST00000485023 ZNF692Q9BU19 519 aaPredicted RBP22.73■■□□□ 1.23
DDR1-246ENST00000485023 TRPC5Q9UL62 973 aaPredicted RBP22.73■■□□□ 1.23
DDR1-246ENST00000485023 ATRNO75882 1429 aa22.73■■□□□ 1.23
DDR1-246ENST00000485023 NLRP6P59044 892 aa22.72■■□□□ 1.23
DDR1-246ENST00000485023 ZC3H6P61129 1189 aaKnown RBP22.72■■□□□ 1.23
DDR1-246ENST00000485023 HDGFL2Q7Z4V5 671 aaPredicted RBP22.72■■□□□ 1.23
DDR1-246ENST00000485023 NLRP13Q86W25 1043 aa22.72■■□□□ 1.23
DDR1-246ENST00000485023 PRDM11Q9NQV5 511 aa22.72■■□□□ 1.23
DDR1-246ENST00000485023 A0A1W2PP64 1363 aa22.72■■□□□ 1.23
DDR1-246ENST00000485023 KIAA0232Q92628 1395 aa22.72■■□□□ 1.23
DDR1-246ENST00000485023 SLC24A1O60721 1099 aa22.71■■□□□ 1.23
DDR1-246ENST00000485023 RBM6P78332 1123 aaKnown RBP22.71■■□□□ 1.23
DDR1-246ENST00000485023 UNC5CLQ8IV45 518 aa22.71■■□□□ 1.23
DDR1-246ENST00000485023 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.71■■□□□ 1.23
DDR1-246ENST00000485023 USP19O94966 1318 aa22.71■■□□□ 1.23
DDR1-246ENST00000485023 COL14A1Q05707 1796 aaKnown RBP22.71■■□□□ 1.23
DDR1-246ENST00000485023 HSPA5P11021 654 aaKnown RBP22.7■■□□□ 1.22
DDR1-246ENST00000485023 CHRNA2Q15822 529 aa22.7■■□□□ 1.22
DDR1-246ENST00000485023 PUS7Q96PZ0 661 aaKnown RBP22.7■■□□□ 1.22
DDR1-246ENST00000485023 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.7■■□□□ 1.22
DDR1-246ENST00000485023 RGS12O14924 1447 aa22.69■■□□□ 1.22
DDR1-246ENST00000485023 ZBTB7CA1YPR0 619 aa22.69■■□□□ 1.22
DDR1-246ENST00000485023 EIF4G2P78344 907 aaKnown RBP eCLIP22.69■■□□□ 1.228e-8■■■■■ 39.6
DDR1-246ENST00000485023 BTG4Q9NY30 223 aa22.69■■□□□ 1.22
DDR1-246ENST00000485023 TERF2IPQ9NYB0 399 aa22.69■■□□□ 1.22
DDR1-246ENST00000485023 POLR3GLQ9BT43 218 aa22.68■■□□□ 1.22
DDR1-246ENST00000485023 CCDC9Q9Y3X0 531 aaKnown RBP22.68■■□□□ 1.22
DDR1-246ENST00000485023 NWD2Q9ULI1 1742 aa22.68■■□□□ 1.22
DDR1-246ENST00000485023 TTC21AQ8NDW8 1320 aa22.67■■□□□ 1.22
DDR1-246ENST00000485023 SOX12O15370 315 aa22.67■■□□□ 1.22
DDR1-246ENST00000485023 NRAPQ86VF7 1730 aa22.67■■□□□ 1.22
DDR1-246ENST00000485023 NINLQ9Y2I6 1382 aa22.66■■□□□ 1.22
DDR1-246ENST00000485023 NME9Q86XW9 330 aa22.66■■□□□ 1.22
DDR1-246ENST00000485023 ZRANB1Q9UGI0 708 aa22.66■■□□□ 1.22
DDR1-246ENST00000485023 SLIT3O75094 1523 aa22.66■■□□□ 1.22
DDR1-246ENST00000485023 GCP02774 474 aa22.65■■□□□ 1.22
DDR1-246ENST00000485023 CDCA8Q53HL2 280 aa22.65■■□□□ 1.22
DDR1-246ENST00000485023 CDK12Q9NYV4 1490 aaPredicted RBP22.65■■□□□ 1.22
DDR1-246ENST00000485023 EDC4Q6P2E9 1401 aaKnown RBP22.65■■□□□ 1.22
DDR1-246ENST00000485023 GJD4Q96KN9 370 aaPredicted RBP22.64■■□□□ 1.21
DDR1-246ENST00000485023 GLI3P10071 1580 aa22.63■■□□□ 1.21
DDR1-246ENST00000485023 ANKRD36BQ8N2N9 1353 aa22.62■■□□□ 1.21
DDR1-246ENST00000485023 MYOM1P52179 1685 aa22.62■■□□□ 1.21
DDR1-246ENST00000485023 VPS72Q15906 364 aa22.61■■□□□ 1.21
DDR1-246ENST00000485023 STRN4Q9NRL3 753 aa22.61■■□□□ 1.21
DDR1-246ENST00000485023 CPDO75976 1380 aa22.61■■□□□ 1.21
DDR1-246ENST00000485023 LMO7Q8WWI1 1683 aa22.58■■□□□ 1.2
DDR1-246ENST00000485023 USP31Q70CQ4 1352 aa22.57■■□□□ 1.2
DDR1-246ENST00000485023 CAMTA1Q9Y6Y1 1673 aa22.57■■□□□ 1.2
DDR1-246ENST00000485023 KCNH5Q8NCM2 988 aa22.56■■□□□ 1.2
DDR1-246ENST00000485023 NFAT5O94916 1531 aa22.56■■□□□ 1.2
DDR1-246ENST00000485023 A0A0G2JS52 829 aa22.55■■□□□ 1.2
DDR1-246ENST00000485023 MYT1Q01538 1121 aa22.55■■□□□ 1.2
DDR1-246ENST00000485023 USP54Q70EL1 1684 aa22.55■■□□□ 1.2
DDR1-246ENST00000485023 EVA1CP58658 441 aa22.54■■□□□ 1.2
DDR1-246ENST00000485023 OVOS2A0A0J9YW53 1432 aa22.54■■□□□ 1.2
DDR1-246ENST00000485023 OVOS2Q6IE36 1432 aa22.54■■□□□ 1.2
DDR1-246ENST00000485023 FAM98CQ17RN3 349 aaKnown RBP22.52■■□□□ 1.2
DDR1-246ENST00000485023 USP35Q9P2H5 1018 aa22.52■■□□□ 1.2
DDR1-246ENST00000485023 COL5A2P05997 1499 aaPredicted RBP22.52■■□□□ 1.2
DDR1-246ENST00000485023 SPATA31A5Q5VU36 1347 aa22.52■■□□□ 1.2
DDR1-246ENST00000485023 SPATA31A7Q8IWB4 1347 aa22.52■■□□□ 1.2
DDR1-246ENST00000485023 AATKQ6ZMQ8 1374 aa22.51■■□□□ 1.19
DDR1-246ENST00000485023 NSD3Q9BZ95 1437 aa22.51■■□□□ 1.19
DDR1-246ENST00000485023 C11orf95C9JLR9 678 aaPredicted RBP22.51■■□□□ 1.19
DDR1-246ENST00000485023 LARP1Q6PKG0 1096 aaKnown RBP22.51■■□□□ 1.19
DDR1-246ENST00000485023 ARHGEF25Q86VW2 580 aa22.51■■□□□ 1.19
DDR1-246ENST00000485023 SEPT12Q8IYM1 358 aa22.5■■□□□ 1.19
DDR1-246ENST00000485023 COG3Q96JB2 828 aa22.5■■□□□ 1.19
DDR1-246ENST00000485023 GGNBP2Q9H3C7 697 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms