RNA–Protein interactions for RNA: ENST00000484806.1

SFI1-223, Transcript of SFI1 centrin binding protein, human

TSL 4

Gene SFI1, Length 567 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-223	ENST00000484806	MORC1	Q86VD1	984 aa		10.89	□□□□□ -0.67
SFI1-223	ENST00000484806	NLRP13	Q86W25	1043 aa		10.89	□□□□□ -0.67
SFI1-223	ENST00000484806	NPHP3	Q7Z494	1330 aa		10.88	□□□□□ -0.67
SFI1-223	ENST00000484806	TTC21B	Q7Z4L5	1316 aa		10.88	□□□□□ -0.67
SFI1-223	ENST00000484806	PSME1	Q06323	249 aa		10.88	□□□□□ -0.67
SFI1-223	ENST00000484806	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	10.88	□□□□□ -0.67
SFI1-223	ENST00000484806	COG3	Q96JB2	828 aa		10.88	□□□□□ -0.67
SFI1-223	ENST00000484806	SLAIN2	Q9P270	581 aa		10.87	□□□□□ -0.67
SFI1-223	ENST00000484806	USP54	Q70EL1	1684 aa		10.87	□□□□□ -0.67
SFI1-223	ENST00000484806	SSH2	Q76I76	1423 aa		10.86	□□□□□ -0.67
SFI1-223	ENST00000484806	FYB1	O15117	783 aa		10.86	□□□□□ -0.67
SFI1-223	ENST00000484806	ORAI2	Q96SN7	254 aa		10.86	□□□□□ -0.67
SFI1-223	ENST00000484806	SCAF1	Q9H7N4	1312 aa	Known RBP	10.85	□□□□□ -0.67
SFI1-223	ENST00000484806	TOM1	O60784	492 aa		10.85	□□□□□ -0.67
SFI1-223	ENST00000484806	PAK3	O75914	559 aa	Predicted RBP	10.85	□□□□□ -0.67
SFI1-223	ENST00000484806	GGNBP2	Q9H3C7	697 aa		10.85	□□□□□ -0.67
SFI1-223	ENST00000484806	PIK3C2A	O00443	1686 aa		10.85	□□□□□ -0.67
SFI1-223	ENST00000484806	OVOS2	A0A0J9YW53	1432 aa		10.84	□□□□□ -0.67
SFI1-223	ENST00000484806	OVOS2	Q6IE36	1432 aa		10.84	□□□□□ -0.67
SFI1-223	ENST00000484806	TRPM3	Q9HCF6	1732 aa	Predicted RBP	10.84	□□□□□ -0.67
SFI1-223	ENST00000484806	MRS2	Q9HD23	443 aa		10.84	□□□□□ -0.67
SFI1-223	ENST00000484806	SBNO1	A3KN83	1393 aa		10.84	□□□□□ -0.67
SFI1-223	ENST00000484806	USP31	Q70CQ4	1352 aa		10.84	□□□□□ -0.67
SFI1-223	ENST00000484806	NHSL1	Q5SYE7	1610 aa		10.84	□□□□□ -0.67
SFI1-223	ENST00000484806	ARHGEF10	O15013	1369 aa		10.83	□□□□□ -0.68
SFI1-223	ENST00000484806	FOXO3	O43524	673 aa		10.83	□□□□□ -0.68
SFI1-223	ENST00000484806	BRINP3	Q76B58	766 aa		10.83	□□□□□ -0.68
SFI1-223	ENST00000484806	KRT28	Q7Z3Y7	464 aa		10.83	□□□□□ -0.68
SFI1-223	ENST00000484806	NME9	Q86XW9	330 aa		10.83	□□□□□ -0.68
SFI1-223	ENST00000484806	ABTB2	Q8N961	1025 aa		10.83	□□□□□ -0.68
SFI1-223	ENST00000484806	CFAP53	Q96M91	514 aa		10.83	□□□□□ -0.68
SFI1-223	ENST00000484806	ROBO1	Q9Y6N7	1651 aa		10.82	□□□□□ -0.68
SFI1-223	ENST00000484806	AATK	Q6ZMQ8	1374 aa		10.82	□□□□□ -0.68
SFI1-223	ENST00000484806	PPP2R1A	P30153	589 aa		10.82	□□□□□ -0.68
SFI1-223	ENST00000484806	TNS3	Q68CZ2	1445 aa		10.82	□□□□□ -0.68
SFI1-223	ENST00000484806	ALS2	Q96Q42	1657 aa		10.82	□□□□□ -0.68
SFI1-223	ENST00000484806	MAP2	P11137	1827 aa	Known RBP	10.81	□□□□□ -0.68
SFI1-223	ENST00000484806	NLRP6	P59044	892 aa		10.81	□□□□□ -0.68
SFI1-223	ENST00000484806	PXDN	Q92626	1479 aa		10.81	□□□□□ -0.68
SFI1-223	ENST00000484806	AHDC1	Q5TGY3	1603 aa	Predicted RBP	10.8	□□□□□ -0.68
SFI1-223	ENST00000484806	TNNT2	P45379	298 aa	Predicted RBP	10.8	□□□□□ -0.68
SFI1-223	ENST00000484806	KCNH5	Q8NCM2	988 aa		10.8	□□□□□ -0.68
SFI1-223	ENST00000484806	MED1	Q15648	1581 aa	Predicted RBP	10.79	□□□□□ -0.68
SFI1-223	ENST00000484806	SMG6	Q86US8	1419 aa	Known RBP	10.79	□□□□□ -0.68
SFI1-223	ENST00000484806	LMOD2	Q6P5Q4	547 aa		10.79	□□□□□ -0.68
SFI1-223	ENST00000484806	CDK12	Q9NYV4	1490 aa	Predicted RBP	10.79	□□□□□ -0.68
SFI1-223	ENST00000484806	SOS2	Q07890	1332 aa	Predicted RBP	10.79	□□□□□ -0.68
SFI1-223	ENST00000484806	UBAP1L	F5GYI3	381 aa		10.78	□□□□□ -0.68
SFI1-223	ENST00000484806	XPC	Q01831	940 aa	Predicted RBP	10.78	□□□□□ -0.68
SFI1-223	ENST00000484806	WDR43	Q15061	677 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
SFI1-223	ENST00000484806	CERK	Q8TCT0	537 aa		10.78	□□□□□ -0.68
SFI1-223	ENST00000484806	SLIT3	O75094	1523 aa		10.78	□□□□□ -0.68
SFI1-223	ENST00000484806	MARF1	Q9Y4F3	1742 aa	Known RBP	10.78	□□□□□ -0.68
SFI1-223	ENST00000484806	KIF24	Q5T7B8	1368 aa		10.77	□□□□□ -0.68
SFI1-223	ENST00000484806	MTHFS	P49914	203 aa		10.77	□□□□□ -0.69
SFI1-223	ENST00000484806	NUDC	Q9Y266	331 aa		10.77	□□□□□ -0.69
SFI1-223	ENST00000484806	PHLPP1	O60346	1717 aa		10.77	□□□□□ -0.69
SFI1-223	ENST00000484806	USP19	O94966	1318 aa		10.77	□□□□□ -0.69
SFI1-223	ENST00000484806	SPATA31A3	Q5VYP0	1347 aa		10.77	□□□□□ -0.69
SFI1-223	ENST00000484806	RTL1	A6NKG5	1358 aa		10.77	□□□□□ -0.69
SFI1-223	ENST00000484806	PHRF1	Q9P1Y6	1649 aa	Known RBP	10.76	□□□□□ -0.69
SFI1-223	ENST00000484806	ZRANB1	Q9UGI0	708 aa		10.76	□□□□□ -0.69
SFI1-223	ENST00000484806	INSR	P06213	1382 aa		10.76	□□□□□ -0.69
SFI1-223	ENST00000484806	LTN1	O94822	1766 aa		10.75	□□□□□ -0.69
SFI1-223	ENST00000484806	NFAT5	O94916	1531 aa		10.75	□□□□□ -0.69
SFI1-223	ENST00000484806	NUTM2G	Q5VZR2	741 aa		10.75	□□□□□ -0.69
SFI1-223	ENST00000484806	FAM9B	Q8IZU0	186 aa		10.75	□□□□□ -0.69
SFI1-223	ENST00000484806	LRRC59	Q96AG4	307 aa	Known RBP	10.75	□□□□□ -0.69
SFI1-223	ENST00000484806	FLT4	P35916	1363 aa		10.75	□□□□□ -0.69
SFI1-223	ENST00000484806	ABCC6	O95255	1503 aa		10.74	□□□□□ -0.69
SFI1-223	ENST00000484806	PPM1G	O15355	546 aa	Predicted RBP	10.74	□□□□□ -0.69
SFI1-223	ENST00000484806	SOX12	O15370	315 aa		10.74	□□□□□ -0.69
SFI1-223	ENST00000484806	AMPH	P49418	695 aa		10.74	□□□□□ -0.69
SFI1-223	ENST00000484806	PIP4K2B	P78356	416 aa		10.74	□□□□□ -0.69
SFI1-223	ENST00000484806	DDX17	Q92841	729 aa	Known RBP	10.74	□□□□□ -0.69
SFI1-223	ENST00000484806	POLK	Q9UBT6	870 aa		10.74	□□□□□ -0.69
SFI1-223	ENST00000484806	PNPLA6	Q8IY17	1366 aa		10.74	□□□□□ -0.69
SFI1-223	ENST00000484806	CRYBG1	Q9Y4K1	1723 aa		10.73	□□□□□ -0.69
SFI1-223	ENST00000484806	DIAPH1	O60610	1272 aa	Known RBP	10.73	□□□□□ -0.69
SFI1-223	ENST00000484806	HAP1	P54257	671 aa	Predicted RBP	10.73	□□□□□ -0.69
SFI1-223	ENST00000484806	RRS1	Q15050	365 aa	Known RBP	10.73	□□□□□ -0.69
SFI1-223	ENST00000484806	PNISR	Q8TF01	805 aa	Known RBP	10.73	□□□□□ -0.69
SFI1-223	ENST00000484806	SHPRH	Q149N8	1683 aa		10.73	□□□□□ -0.69
SFI1-223	ENST00000484806	GC	P02774	474 aa		10.72	□□□□□ -0.69
SFI1-223	ENST00000484806	CCDC184	Q52MB2	194 aa		10.72	□□□□□ -0.69
SFI1-223	ENST00000484806	PNN	Q9H307	717 aa	Known RBP	10.72	□□□□□ -0.69
SFI1-223	ENST00000484806	EMILIN1	Q9Y6C2	1016 aa		10.72	□□□□□ -0.69
SFI1-223	ENST00000484806	MAP3K19	Q56UN5	1328 aa		10.72	□□□□□ -0.69
SFI1-223	ENST00000484806	COL3A1	P02461	1466 aa	Predicted RBP	10.72	□□□□□ -0.69
SFI1-223	ENST00000484806	COL16A1	Q07092	1604 aa	Predicted RBP	10.72	□□□□□ -0.69
SFI1-223	ENST00000484806	COL22A1	Q8NFW1	1626 aa	Predicted RBP	10.72	□□□□□ -0.69
SFI1-223	ENST00000484806	ABCA3	Q99758	1704 aa		10.72	□□□□□ -0.69
SFI1-223	ENST00000484806	PEAK1	Q9H792	1746 aa		10.7	□□□□□ -0.7
SFI1-223	ENST00000484806	BLM	P54132	1417 aa	Predicted RBP	10.7	□□□□□ -0.7
SFI1-223	ENST00000484806	CPD	O75976	1380 aa		10.7	□□□□□ -0.7
SFI1-223	ENST00000484806	NEFM	P07197	916 aa		10.7	□□□□□ -0.7
SFI1-223	ENST00000484806	U2SURP	O15042	1029 aa	Known RBP	10.69	□□□□□ -0.7
SFI1-223	ENST00000484806	IP6K1	Q92551	441 aa		10.69	□□□□□ -0.7
SFI1-223	ENST00000484806	YTHDC1	Q96MU7	727 aa	Known RBP	10.69	□□□□□ -0.7
SFI1-223	ENST00000484806	FAM208A	Q9UK61	1670 aa	Known RBP	10.69	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms