RNA–Protein interactions for RNA: ENST00000484372.1

SNRNP200-206, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-206ENST00000484372 PLEKHG3A1L390 1219 aa17.12■□□□□ 0.33
SNRNP200-206ENST00000484372 MYT1Q01538 1121 aa17.12■□□□□ 0.33
SNRNP200-206ENST00000484372 NBPF8Q3BBV2 869 aa17.12■□□□□ 0.33
SNRNP200-206ENST00000484372 SEPT12Q8IYM1 358 aa17.12■□□□□ 0.33
SNRNP200-206ENST00000484372 PRDM11Q9NQV5 511 aa17.12■□□□□ 0.33
SNRNP200-206ENST00000484372 ACEP12821 1306 aa17.12■□□□□ 0.33
SNRNP200-206ENST00000484372 ALS2Q96Q42 1657 aa17.11■□□□□ 0.33
SNRNP200-206ENST00000484372 ABCA3Q99758 1704 aa17.11■□□□□ 0.33
SNRNP200-206ENST00000484372 SIN3AQ96ST3 1273 aa17.11■□□□□ 0.33
SNRNP200-206ENST00000484372 GLI3P10071 1580 aa17.11■□□□□ 0.33
SNRNP200-206ENST00000484372 PLCH1Q4KWH8 1693 aa17.1■□□□□ 0.33
SNRNP200-206ENST00000484372 SF3B2Q13435 895 aaKnown RBP17.1■□□□□ 0.33
SNRNP200-206ENST00000484372 POLR3AO14802 1390 aaPredicted RBP17.1■□□□□ 0.33
SNRNP200-206ENST00000484372 ONECUT3O60422 494 aaPredicted RBP17.09■□□□□ 0.33
SNRNP200-206ENST00000484372 COL14A1Q05707 1796 aaKnown RBP17.08■□□□□ 0.33
SNRNP200-206ENST00000484372 KRT27Q7Z3Y8 459 aa17.08■□□□□ 0.32
SNRNP200-206ENST00000484372 ABTB2Q8N961 1025 aa17.08■□□□□ 0.32
SNRNP200-206ENST00000484372 ROCK2O75116 1388 aaKnown RBP17.07■□□□□ 0.32
SNRNP200-206ENST00000484372 TRIM26Q12899 539 aaPredicted RBP17.07■□□□□ 0.32
SNRNP200-206ENST00000484372 CABP2Q9NPB3 220 aa17.07■□□□□ 0.32
SNRNP200-206ENST00000484372 PPIP5K1Q6PFW1 1433 aa17.06■□□□□ 0.32
SNRNP200-206ENST00000484372 BRD4O60885 1362 aaPredicted RBP17.06■□□□□ 0.32
SNRNP200-206ENST00000484372 EVC2Q86UK5 1308 aa17.06■□□□□ 0.32
SNRNP200-206ENST00000484372 FAM98CQ17RN3 349 aaKnown RBP17.06■□□□□ 0.32
SNRNP200-206ENST00000484372 NUTM2GQ5VZR2 741 aa17.06■□□□□ 0.32
SNRNP200-206ENST00000484372 ZRANB1Q9UGI0 708 aa17.06■□□□□ 0.32
SNRNP200-206ENST00000484372 BLMP54132 1417 aaPredicted RBP17.05■□□□□ 0.32
SNRNP200-206ENST00000484372 NLRP13Q86W25 1043 aa17.05■□□□□ 0.32
SNRNP200-206ENST00000484372 KIAA0232Q92628 1395 aa17.04■□□□□ 0.32
SNRNP200-206ENST00000484372 TOPAZ1Q8N9V7 1692 aa17.04■□□□□ 0.32
SNRNP200-206ENST00000484372 ZC3H6P61129 1189 aaKnown RBP17.04■□□□□ 0.32
SNRNP200-206ENST00000484372 SPATA31A5Q5VU36 1347 aa17.03■□□□□ 0.32
SNRNP200-206ENST00000484372 SPATA31A7Q8IWB4 1347 aa17.03■□□□□ 0.32
SNRNP200-206ENST00000484372 EVA1CP58658 441 aa17.03■□□□□ 0.32
SNRNP200-206ENST00000484372 CABP1Q9NZU7 370 aa17.03■□□□□ 0.32
SNRNP200-206ENST00000484372 EP400Q96L91 3159 aa17.03■□□□□ 0.32
SNRNP200-206ENST00000484372 QRICH2Q9H0J4 1663 aa17.02■□□□□ 0.32
SNRNP200-206ENST00000484372 CHRNA2Q15822 529 aa17.02■□□□□ 0.32
SNRNP200-206ENST00000484372 STRN4Q9NRL3 753 aa17.02■□□□□ 0.32
SNRNP200-206ENST00000484372 NRAPQ86VF7 1730 aa17.01■□□□□ 0.31
SNRNP200-206ENST00000484372 TRPM1Q7Z4N2 1603 aa17■□□□□ 0.31
SNRNP200-206ENST00000484372 CRYBG1Q9Y4K1 1723 aa17■□□□□ 0.31
SNRNP200-206ENST00000484372 BRWD3Q6RI45 1802 aa17■□□□□ 0.31
SNRNP200-206ENST00000484372 ZNF692Q9BU19 519 aaPredicted RBP16.99■□□□□ 0.31
SNRNP200-206ENST00000484372 TONSLQ96HA7 1378 aa16.99■□□□□ 0.31
SNRNP200-206ENST00000484372 USP19O94966 1318 aa16.98■□□□□ 0.31
SNRNP200-206ENST00000484372 SPATA31A1Q5TZJ5 1347 aa16.98■□□□□ 0.31
SNRNP200-206ENST00000484372 GCP02774 474 aa16.98■□□□□ 0.31
SNRNP200-206ENST00000484372 NLRP6P59044 892 aa16.98■□□□□ 0.31
SNRNP200-206ENST00000484372 CARD11Q9BXL7 1154 aa16.98■□□□□ 0.31
SNRNP200-206ENST00000484372 PHRF1Q9P1Y6 1649 aaKnown RBP16.98■□□□□ 0.31
SNRNP200-206ENST00000484372 CPDO75976 1380 aa16.98■□□□□ 0.31
SNRNP200-206ENST00000484372 BAG6P46379 1132 aa16.97■□□□□ 0.31
SNRNP200-206ENST00000484372 USP6P35125 1406 aa16.96■□□□□ 0.31
SNRNP200-206ENST00000484372 USP35Q9P2H5 1018 aa16.96■□□□□ 0.31
SNRNP200-206ENST00000484372 DEFB132Q7Z7B7 95 aa16.95■□□□□ 0.3
SNRNP200-206ENST00000484372 ZBTB7CA1YPR0 619 aa16.94■□□□□ 0.3
SNRNP200-206ENST00000484372 SSH2Q76I76 1423 aa16.94■□□□□ 0.3
SNRNP200-206ENST00000484372 NRKQ7Z2Y5 1582 aa16.94■□□□□ 0.3
SNRNP200-206ENST00000484372 PDE3BQ13370 1112 aa16.93■□□□□ 0.3
SNRNP200-206ENST00000484372 BARGINQ6ZT62 677 aa16.93■□□□□ 0.3
SNRNP200-206ENST00000484372 TCP11L2Q8N4U5 519 aa16.93■□□□□ 0.3
SNRNP200-206ENST00000484372 THRAP3Q9Y2W1 955 aaKnown RBP16.93■□□□□ 0.3
SNRNP200-206ENST00000484372 FAM196AQ6ZSG2 479 aa16.92■□□□□ 0.3
SNRNP200-206ENST00000484372 KCNH5Q8NCM2 988 aa16.92■□□□□ 0.3
SNRNP200-206ENST00000484372 TTC21AQ8NDW8 1320 aa16.92■□□□□ 0.3
SNRNP200-206ENST00000484372 SBNO2Q9Y2G9 1366 aa16.91■□□□□ 0.3
SNRNP200-206ENST00000484372 LARP1Q6PKG0 1096 aaKnown RBP16.91■□□□□ 0.3
SNRNP200-206ENST00000484372 TTC21BQ7Z4L5 1316 aa16.91■□□□□ 0.3
SNRNP200-206ENST00000484372 THSD7AQ9UPZ6 1657 aa16.9■□□□□ 0.3
SNRNP200-206ENST00000484372 CAMTA1Q9Y6Y1 1673 aa16.9■□□□□ 0.3
SNRNP200-206ENST00000484372 KTN1Q86UP2 1357 aaKnown RBP16.89■□□□□ 0.3
SNRNP200-206ENST00000484372 SLC24A1O60721 1099 aa16.89■□□□□ 0.29
SNRNP200-206ENST00000484372 FAM182BQ5T319 152 aa16.89■□□□□ 0.29
SNRNP200-206ENST00000484372 AATKQ6ZMQ8 1374 aa16.89■□□□□ 0.29
SNRNP200-206ENST00000484372 C11orf95C9JLR9 678 aaPredicted RBP16.88■□□□□ 0.29
SNRNP200-206ENST00000484372 TMC1Q8TDI8 760 aa16.88■□□□□ 0.29
SNRNP200-206ENST00000484372 HDGFL2Q7Z4V5 671 aaPredicted RBP16.87■□□□□ 0.29
SNRNP200-206ENST00000484372 CRB1P82279 1406 aa16.87■□□□□ 0.29
SNRNP200-206ENST00000484372 COL5A2P05997 1499 aaPredicted RBP16.86■□□□□ 0.29
SNRNP200-206ENST00000484372 SLIT3O75094 1523 aa16.86■□□□□ 0.29
SNRNP200-206ENST00000484372 LMO7Q8WWI1 1683 aa16.86■□□□□ 0.29
SNRNP200-206ENST00000484372 EN1Q05925 392 aaPredicted RBP16.86■□□□□ 0.29
SNRNP200-206ENST00000484372 TOM1L2Q6ZVM7 507 aa16.86■□□□□ 0.29
SNRNP200-206ENST00000484372 CPSF1Q10570 1443 aaKnown RBP16.86■□□□□ 0.29
SNRNP200-206ENST00000484372 RGPD1P0DJD0 1748 aa16.85■□□□□ 0.29
SNRNP200-206ENST00000484372 SOX12O15370 315 aa16.85■□□□□ 0.29
SNRNP200-206ENST00000484372 TRIM37O94972 964 aa16.85■□□□□ 0.29
SNRNP200-206ENST00000484372 PUS7Q96PZ0 661 aaKnown RBP16.85■□□□□ 0.29
SNRNP200-206ENST00000484372 PCGF6Q9BYE7 350 aa16.85■□□□□ 0.29
SNRNP200-206ENST00000484372 TERF2IPQ9NYB0 399 aa16.85■□□□□ 0.29
SNRNP200-206ENST00000484372 PIK3C2AO00443 1686 aa16.83■□□□□ 0.28
SNRNP200-206ENST00000484372 APBA3O96018 575 aa16.83■□□□□ 0.28
SNRNP200-206ENST00000484372 CSB-PGBD3P0DP91 1061 aa16.83■□□□□ 0.28
SNRNP200-206ENST00000484372 ARHGEF25Q86VW2 580 aa16.83■□□□□ 0.28
SNRNP200-206ENST00000484372 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.83■□□□□ 0.28
SNRNP200-206ENST00000484372 AKAP12Q02952 1782 aa16.82■□□□□ 0.28
SNRNP200-206ENST00000484372 DISP2A7MBM2 1401 aa16.82■□□□□ 0.28
SNRNP200-206ENST00000484372 WDR17Q8IZU2 1322 aa16.82■□□□□ 0.28
SNRNP200-206ENST00000484372 CDCA7Q9BWT1 371 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms