RNA–Protein interactions for RNA: ENST00000484181.5

PCCB-217, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 1,683 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-217ENST00000484181 U2AF1Q01081 240 aaKnown RBP eCLIP21.72■■□□□ 1.07
PCCB-217ENST00000484181 AMOTL2Q9Y2J4 779 aa21.72■■□□□ 1.07
PCCB-217ENST00000484181 XRN1Q8IZH2 1706 aaKnown RBP21.71■■□□□ 1.07
PCCB-217ENST00000484181 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.71■■□□□ 1.07
PCCB-217ENST00000484181 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.71■■□□□ 1.07
PCCB-217ENST00000484181 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.71■■□□□ 1.07
PCCB-217ENST00000484181 NKTRP30414 1462 aaKnown RBP21.71■■□□□ 1.07
PCCB-217ENST00000484181 CCDC27Q2M243 656 aa21.69■■□□□ 1.06
PCCB-217ENST00000484181 PNPLA6Q8IY17 1366 aa21.69■■□□□ 1.06
PCCB-217ENST00000484181 COG3Q96JB2 828 aa21.68■■□□□ 1.06
PCCB-217ENST00000484181 AATKQ6ZMQ8 1374 aa21.68■■□□□ 1.06
PCCB-217ENST00000484181 DIAPH1O60610 1272 aaKnown RBP21.67■■□□□ 1.06
PCCB-217ENST00000484181 ANKLE2Q86XL3 938 aa21.67■■□□□ 1.06
PCCB-217ENST00000484181 TRMT2AQ8IZ69 625 aaKnown RBP21.67■■□□□ 1.06
PCCB-217ENST00000484181 CCDC136Q96JN2 1154 aa21.67■■□□□ 1.06
PCCB-217ENST00000484181 MAPK8IP3Q9UPT6 1336 aa21.67■■□□□ 1.06
PCCB-217ENST00000484181 TCP11L2Q8N4U5 519 aa21.66■■□□□ 1.06
PCCB-217ENST00000484181 PRR36Q9H6K5 1346 aa21.66■■□□□ 1.06
PCCB-217ENST00000484181 PLEKHG3A1L390 1219 aa21.66■■□□□ 1.06
PCCB-217ENST00000484181 WDR63Q8IWG1 891 aa21.66■■□□□ 1.06
PCCB-217ENST00000484181 WWC1Q8IX03 1113 aa21.66■■□□□ 1.06
PCCB-217ENST00000484181 U2SURPO15042 1029 aaKnown RBP21.65■■□□□ 1.06
PCCB-217ENST00000484181 B4GALNT3Q6L9W6 998 aa21.65■■□□□ 1.06
PCCB-217ENST00000484181 CDK12Q9NYV4 1490 aaPredicted RBP21.65■■□□□ 1.06
PCCB-217ENST00000484181 NRKQ7Z2Y5 1582 aa21.64■■□□□ 1.05
PCCB-217ENST00000484181 ANKARQ7Z5J8 1434 aa21.64■■□□□ 1.05
PCCB-217ENST00000484181 NEFMP07197 916 aa21.63■■□□□ 1.05
PCCB-217ENST00000484181 PHF23Q9BUL5 403 aaPredicted RBP21.62■■□□□ 1.05
PCCB-217ENST00000484181 TSHZ2Q9NRE2 1034 aa21.62■■□□□ 1.05
PCCB-217ENST00000484181 NME9Q86XW9 330 aa21.61■■□□□ 1.05
PCCB-217ENST00000484181 USP6P35125 1406 aa21.6■■□□□ 1.05
PCCB-217ENST00000484181 MYH16Q9H6N6 1097 aa21.6■■□□□ 1.05
PCCB-217ENST00000484181 POLKQ9UBT6 870 aa21.6■■□□□ 1.05
PCCB-217ENST00000484181 ACEP12821 1306 aa21.59■■□□□ 1.05
PCCB-217ENST00000484181 SETD1BQ9UPS6 1966 aaKnown RBP21.59■■□□□ 1.05
PCCB-217ENST00000484181 TTC21AQ8NDW8 1320 aa21.59■■□□□ 1.05
PCCB-217ENST00000484181 FCHSD2O94868 740 aa21.58■■□□□ 1.05
PCCB-217ENST00000484181 TTC21BQ7Z4L5 1316 aa21.58■■□□□ 1.04
PCCB-217ENST00000484181 NEUROD2Q15784 382 aa21.57■■□□□ 1.04
PCCB-217ENST00000484181 NCKAP5LQ9HCH0 1330 aa21.56■■□□□ 1.04
PCCB-217ENST00000484181 PPM1GO15355 546 aaPredicted RBP21.56■■□□□ 1.04
PCCB-217ENST00000484181 PLEKHF1Q96S99 279 aa21.56■■□□□ 1.04
PCCB-217ENST00000484181 RRP7AQ9Y3A4 280 aaKnown RBP21.56■■□□□ 1.04
PCCB-217ENST00000484181 EXOC6Q8TAG9 804 aa21.55■■□□□ 1.04
PCCB-217ENST00000484181 OVOS2A0A0J9YW53 1432 aa21.54■■□□□ 1.04
PCCB-217ENST00000484181 OVOS2Q6IE36 1432 aa21.54■■□□□ 1.04
PCCB-217ENST00000484181 KCNA6P17658 529 aa21.54■■□□□ 1.04
PCCB-217ENST00000484181 MAP2P11137 1827 aaKnown RBP21.54■■□□□ 1.04
PCCB-217ENST00000484181 FMN2Q9NZ56 1722 aa21.53■■□□□ 1.04
PCCB-217ENST00000484181 LRRC7Q96NW7 1537 aa21.53■■□□□ 1.04
PCCB-217ENST00000484181 CHD2O14647 1828 aaKnown RBP21.53■■□□□ 1.04
PCCB-217ENST00000484181 SPINK5Q9NQ38 1064 aaPredicted RBP21.53■■□□□ 1.04
PCCB-217ENST00000484181 NPHP4O75161 1426 aaPredicted RBP21.52■■□□□ 1.04
PCCB-217ENST00000484181 IL16Q14005 1332 aa21.52■■□□□ 1.04
PCCB-217ENST00000484181 TMPOP42166 694 aaKnown RBP21.52■■□□□ 1.04
PCCB-217ENST00000484181 NALCNQ8IZF0 1738 aa21.51■■□□□ 1.03
PCCB-217ENST00000484181 CT47B1P0C2W7 299 aaPredicted RBP21.51■■□□□ 1.03
PCCB-217ENST00000484181 NGDNQ8NEJ9 315 aaKnown RBP21.51■■□□□ 1.03
PCCB-217ENST00000484181 SSH2Q76I76 1423 aa21.51■■□□□ 1.03
PCCB-217ENST00000484181 NUTM2FA1L443 756 aa21.5■■□□□ 1.03
PCCB-217ENST00000484181 EMILIN1Q9Y6C2 1016 aa21.5■■□□□ 1.03
PCCB-217ENST00000484181 PLIN1O60240 522 aa21.5■■□□□ 1.03
PCCB-217ENST00000484181 USP31Q70CQ4 1352 aa21.49■■□□□ 1.03
PCCB-217ENST00000484181 DMRT2Q9Y5R5 561 aa21.49■■□□□ 1.03
PCCB-217ENST00000484181 CALD1Q05682 793 aaKnown RBP21.48■■□□□ 1.03
PCCB-217ENST00000484181 RSPH6AQ9H0K4 717 aa21.48■■□□□ 1.03
PCCB-217ENST00000484181 IL13P35225 146 aa21.47■■□□□ 1.03
PCCB-217ENST00000484181 CRBNQ96SW2 442 aa21.47■■□□□ 1.03
PCCB-217ENST00000484181 CANXP27824 592 aaKnown RBP21.47■■□□□ 1.03
PCCB-217ENST00000484181 ZRANB1Q9UGI0 708 aa21.47■■□□□ 1.03
PCCB-217ENST00000484181 PRKAR2BP31323 418 aa21.46■■□□□ 1.03
PCCB-217ENST00000484181 RIPK4P57078 832 aa21.46■■□□□ 1.03
PCCB-217ENST00000484181 ADGRL3Q9HAR2 1447 aa21.45■■□□□ 1.02
PCCB-217ENST00000484181 LMOD3Q0VAK6 560 aa21.45■■□□□ 1.02
PCCB-217ENST00000484181 PDE3AQ14432 1141 aa21.44■■□□□ 1.02
PCCB-217ENST00000484181 RRS1Q15050 365 aaKnown RBP21.44■■□□□ 1.02
PCCB-217ENST00000484181 PMFBP1Q8TBY8 1022 aa21.44■■□□□ 1.02
PCCB-217ENST00000484181 NWD1Q149M9 1564 aa21.43■■□□□ 1.02
PCCB-217ENST00000484181 NFE2L2Q16236 605 aa21.42■■□□□ 1.02
PCCB-217ENST00000484181 TRIM35Q9UPQ4 493 aa21.42■■□□□ 1.02
PCCB-217ENST00000484181 USP54Q70EL1 1684 aa21.41■■□□□ 1.02
PCCB-217ENST00000484181 RGPD8O14715 1765 aaPredicted RBP21.41■■□□□ 1.02
PCCB-217ENST00000484181 FBLN1P23142 703 aa21.4■■□□□ 1.02
PCCB-217ENST00000484181 FANCIQ9NVI1 1328 aa21.4■■□□□ 1.02
PCCB-217ENST00000484181 KIF24Q5T7B8 1368 aa21.4■■□□□ 1.02
PCCB-217ENST00000484181 AAMPQ13685 434 aa21.4■■□□□ 1.02
PCCB-217ENST00000484181 BCAR3O75815 825 aa21.39■■□□□ 1.01
PCCB-217ENST00000484181 RARSP54136 660 aaKnown RBP21.39■■□□□ 1.01
PCCB-217ENST00000484181 SBNO1A3KN83 1393 aa21.39■■□□□ 1.01
PCCB-217ENST00000484181 FLT4P35916 1363 aa21.39■■□□□ 1.01
PCCB-217ENST00000484181 PIK3C2AO00443 1686 aa21.39■■□□□ 1.01
PCCB-217ENST00000484181 HMOX1P09601 288 aa21.38■■□□□ 1.01
PCCB-217ENST00000484181 MS4A1P11836 297 aa21.38■■□□□ 1.01
PCCB-217ENST00000484181 C20orf194Q5TEA3 1177 aa21.38■■□□□ 1.01
PCCB-217ENST00000484181 PHF8Q9UPP1 1060 aa21.37■■□□□ 1.01
PCCB-217ENST00000484181 RBM19Q9Y4C8 960 aaKnown RBP21.37■■□□□ 1.01
PCCB-217ENST00000484181 C14orf37Q86TY3 774 aa21.36■■□□□ 1.01
PCCB-217ENST00000484181 ARHGEF10O15013 1369 aa21.35■■□□□ 1.01
PCCB-217ENST00000484181 EIF4A2Q14240 407 aaKnown RBP21.35■■□□□ 1.01
PCCB-217ENST00000484181 CENPQQ7L2Z9 268 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms