RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 KNSTRNQ9Y448 316 aa19.4■□□□□ 0.7
SRSF6-202ENST00000483871 NHSL1Q5SYE7 1610 aa19.39■□□□□ 0.69
SRSF6-202ENST00000483871 ZRANB1Q9UGI0 708 aa19.39■□□□□ 0.69
SRSF6-202ENST00000483871 EDC4Q6P2E9 1401 aaKnown RBP19.38■□□□□ 0.69
SRSF6-202ENST00000483871 NUTM2GQ5VZR2 741 aa19.38■□□□□ 0.69
SRSF6-202ENST00000483871 LMOD2Q6P5Q4 547 aa19.38■□□□□ 0.69
SRSF6-202ENST00000483871 NME9Q86XW9 330 aa19.38■□□□□ 0.69
SRSF6-202ENST00000483871 FYB1O15117 783 aa19.37■□□□□ 0.69
SRSF6-202ENST00000483871 ABTB2Q8N961 1025 aa19.36■□□□□ 0.69
SRSF6-202ENST00000483871 AHDC1Q5TGY3 1603 aaPredicted RBP19.36■□□□□ 0.69
SRSF6-202ENST00000483871 PLEKHG5O94827 1062 aa19.36■□□□□ 0.69
SRSF6-202ENST00000483871 AMER1Q5JTC6 1135 aaPredicted RBP19.36■□□□□ 0.69
SRSF6-202ENST00000483871 GGNBP2Q9H3C7 697 aa19.36■□□□□ 0.69
SRSF6-202ENST00000483871 NRKQ7Z2Y5 1582 aa19.36■□□□□ 0.69
SRSF6-202ENST00000483871 TRPM3Q9HCF6 1732 aaPredicted RBP19.35■□□□□ 0.69
SRSF6-202ENST00000483871 SPATA31A3Q5VYP0 1347 aa19.35■□□□□ 0.69
SRSF6-202ENST00000483871 CGNL1Q0VF96 1302 aa19.34■□□□□ 0.69
SRSF6-202ENST00000483871 PHLPP1O60346 1717 aa19.34■□□□□ 0.69
SRSF6-202ENST00000483871 HSPA1LP34931 641 aa19.34■□□□□ 0.69
SRSF6-202ENST00000483871 CC2D1BQ5T0F9 858 aaKnown RBP19.34■□□□□ 0.69
SRSF6-202ENST00000483871 SBNO1A3KN83 1393 aa19.34■□□□□ 0.69
SRSF6-202ENST00000483871 TTC21AQ8NDW8 1320 aa19.34■□□□□ 0.69
SRSF6-202ENST00000483871 LRRC59Q96AG4 307 aaKnown RBP19.33■□□□□ 0.69
SRSF6-202ENST00000483871 BRD4O60885 1362 aaPredicted RBP19.33■□□□□ 0.69
SRSF6-202ENST00000483871 NLRP6P59044 892 aa19.33■□□□□ 0.68
SRSF6-202ENST00000483871 FBXO41Q8TF61 875 aa19.33■□□□□ 0.68
SRSF6-202ENST00000483871 TNS3Q68CZ2 1445 aa19.32■□□□□ 0.68
SRSF6-202ENST00000483871 COL16A1Q07092 1604 aaPredicted RBP19.31■□□□□ 0.68
SRSF6-202ENST00000483871 PIK3C2AO00443 1686 aa19.3■□□□□ 0.68
SRSF6-202ENST00000483871 CABLES1Q8TDN4 633 aa19.3■□□□□ 0.68
SRSF6-202ENST00000483871 ALS2Q96Q42 1657 aa19.29■□□□□ 0.68
SRSF6-202ENST00000483871 FBLN1P23142 703 aa19.29■□□□□ 0.68
SRSF6-202ENST00000483871 DIEXFQ68CQ4 756 aaKnown RBP19.28■□□□□ 0.68
SRSF6-202ENST00000483871 NLRP13Q86W25 1043 aa19.28■□□□□ 0.68
SRSF6-202ENST00000483871 COG3Q96JB2 828 aa19.28■□□□□ 0.68
SRSF6-202ENST00000483871 SOX12O15370 315 aa19.27■□□□□ 0.68
SRSF6-202ENST00000483871 KIF20BQ96Q89 1820 aa19.27■□□□□ 0.67
SRSF6-202ENST00000483871 TNNT2P45379 298 aaPredicted RBP19.27■□□□□ 0.67
SRSF6-202ENST00000483871 USP31Q70CQ4 1352 aa19.26■□□□□ 0.67
SRSF6-202ENST00000483871 ARHGEF10O15013 1369 aa19.26■□□□□ 0.67
SRSF6-202ENST00000483871 OVOS2A0A0J9YW53 1432 aa19.25■□□□□ 0.67
SRSF6-202ENST00000483871 OVOS2Q6IE36 1432 aa19.25■□□□□ 0.67
SRSF6-202ENST00000483871 MORC1Q86VD1 984 aa19.25■□□□□ 0.67
SRSF6-202ENST00000483871 PNPLA6Q8IY17 1366 aa19.25■□□□□ 0.67
SRSF6-202ENST00000483871 NPC1L1Q9UHC9 1359 aa19.25■□□□□ 0.67
SRSF6-202ENST00000483871 MARF1Q9Y4F3 1742 aaKnown RBP19.24■□□□□ 0.67
SRSF6-202ENST00000483871 NSD2O96028 1365 aa19.23■□□□□ 0.67
SRSF6-202ENST00000483871 GCP02774 474 aa19.23■□□□□ 0.67
SRSF6-202ENST00000483871 MED1Q15648 1581 aaPredicted RBP19.23■□□□□ 0.67
SRSF6-202ENST00000483871 USP19O94966 1318 aa19.22■□□□□ 0.67
SRSF6-202ENST00000483871 PRKRIP1Q9H875 184 aaPredicted RBP19.21■□□□□ 0.67
SRSF6-202ENST00000483871 JCADQ9P266 1359 aa19.21■□□□□ 0.67
SRSF6-202ENST00000483871 ANKRD26Q9UPS8 1709 aa19.19■□□□□ 0.66
SRSF6-202ENST00000483871 NUTM2BA6NNL0 878 aaPredicted RBP19.19■□□□□ 0.66
SRSF6-202ENST00000483871 NUTM2EB1AL46 878 aaPredicted RBP19.19■□□□□ 0.66
SRSF6-202ENST00000483871 HAP1P54257 671 aaPredicted RBP19.19■□□□□ 0.66
SRSF6-202ENST00000483871 ZC3H6P61129 1189 aaKnown RBP19.19■□□□□ 0.66
SRSF6-202ENST00000483871 RRS1Q15050 365 aaKnown RBP19.19■□□□□ 0.66
SRSF6-202ENST00000483871 NUTM2AQ8IVF1 878 aaPredicted RBP19.19■□□□□ 0.66
SRSF6-202ENST00000483871 ANP32CO43423 234 aa19.18■□□□□ 0.66
SRSF6-202ENST00000483871 PARD3Q8TEW0 1356 aa19.18■□□□□ 0.66
SRSF6-202ENST00000483871 KCNH5Q8NCM2 988 aa19.17■□□□□ 0.66
SRSF6-202ENST00000483871 USP54Q70EL1 1684 aa19.17■□□□□ 0.66
SRSF6-202ENST00000483871 SLIT3O75094 1523 aa19.17■□□□□ 0.66
SRSF6-202ENST00000483871 ZBTB7CA1YPR0 619 aa19.17■□□□□ 0.66
SRSF6-202ENST00000483871 CRYBG1Q9Y4K1 1723 aa19.16■□□□□ 0.66
SRSF6-202ENST00000483871 COL22A1Q8NFW1 1626 aaPredicted RBP19.16■□□□□ 0.66
SRSF6-202ENST00000483871 RALBP1Q15311 655 aa19.16■□□□□ 0.66
SRSF6-202ENST00000483871 SHPRHQ149N8 1683 aa19.16■□□□□ 0.66
SRSF6-202ENST00000483871 PHRF1Q9P1Y6 1649 aaKnown RBP19.15■□□□□ 0.66
SRSF6-202ENST00000483871 POLKQ9UBT6 870 aa19.15■□□□□ 0.66
SRSF6-202ENST00000483871 EMILIN1Q9Y6C2 1016 aa19.15■□□□□ 0.66
SRSF6-202ENST00000483871 ADAMTS2O95450 1211 aa19.14■□□□□ 0.66
SRSF6-202ENST00000483871 PPP2R1AP30153 589 aa19.14■□□□□ 0.66
SRSF6-202ENST00000483871 MAP2P11137 1827 aaKnown RBP19.14■□□□□ 0.65
SRSF6-202ENST00000483871 PPM1GO15355 546 aaPredicted RBP19.14■□□□□ 0.65
SRSF6-202ENST00000483871 ARHGEF25Q86VW2 580 aa19.14■□□□□ 0.65
SRSF6-202ENST00000483871 MAP3K19Q56UN5 1328 aa19.13■□□□□ 0.65
SRSF6-202ENST00000483871 NFAT5O94916 1531 aa19.13■□□□□ 0.65
SRSF6-202ENST00000483871 ABCA3Q99758 1704 aa19.13■□□□□ 0.65
SRSF6-202ENST00000483871 CHRNA2Q15822 529 aa19.13■□□□□ 0.65
SRSF6-202ENST00000483871 ILDR1Q86SU0 546 aaPredicted RBP19.13■□□□□ 0.65
SRSF6-202ENST00000483871 AATKQ6ZMQ8 1374 aa19.13■□□□□ 0.65
SRSF6-202ENST00000483871 MTHFSP49914 203 aa19.12■□□□□ 0.65
SRSF6-202ENST00000483871 KIAA0232Q92628 1395 aa19.12■□□□□ 0.65
SRSF6-202ENST00000483871 SPATA31A6Q5VVP1 1343 aa19.12■□□□□ 0.65
SRSF6-202ENST00000483871 MIER1Q8N108 512 aa19.11■□□□□ 0.65
SRSF6-202ENST00000483871 FAM83GA6ND36 823 aa19.11■□□□□ 0.65
SRSF6-202ENST00000483871 MYBBP1AQ9BQG0 1328 aaKnown RBP19.1■□□□□ 0.65
SRSF6-202ENST00000483871 AMPHP49418 695 aa19.09■□□□□ 0.65
SRSF6-202ENST00000483871 PRDM11Q9NQV5 511 aa19.09■□□□□ 0.65
SRSF6-202ENST00000483871 AXIN2Q9Y2T1 843 aa19.09■□□□□ 0.65
SRSF6-202ENST00000483871 LRP6O75581 1613 aa19.08■□□□□ 0.65
SRSF6-202ENST00000483871 CCDC184Q52MB2 194 aa19.08■□□□□ 0.64
SRSF6-202ENST00000483871 HSP90AB2PQ58FF8 381 aa19.08■□□□□ 0.64
SRSF6-202ENST00000483871 CPDO75976 1380 aa19.07■□□□□ 0.64
SRSF6-202ENST00000483871 LTN1O94822 1766 aa19.07■□□□□ 0.64
SRSF6-202ENST00000483871 HOXC9P31274 260 aa19.07■□□□□ 0.64
SRSF6-202ENST00000483871 PEAK1Q9H792 1746 aa19.06■□□□□ 0.64
SRSF6-202ENST00000483871 IP6K1Q92551 441 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 170.4 ms