RNA–Protein interactions for RNA: ENST00000483821.1

RXRB-205, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-205ENST00000483821 NALCNQ8IZF0 1738 aa17.86■□□□□ 0.45
RXRB-205ENST00000483821 ANKRD26Q9UPS8 1709 aa17.86■□□□□ 0.45
RXRB-205ENST00000483821 DCCP43146 1447 aa17.85■□□□□ 0.45
RXRB-205ENST00000483821 NME9Q86XW9 330 aa17.85■□□□□ 0.45
RXRB-205ENST00000483821 KIF20BQ96Q89 1820 aa17.85■□□□□ 0.45
RXRB-205ENST00000483821 ADAMTS8Q9UP79 889 aa17.85■□□□□ 0.45
RXRB-205ENST00000483821 TMEM94Q12767 1356 aa17.84■□□□□ 0.45
RXRB-205ENST00000483821 AATKQ6ZMQ8 1374 aa17.84■□□□□ 0.45
RXRB-205ENST00000483821 ESCO1Q5FWF5 840 aa17.84■□□□□ 0.45
RXRB-205ENST00000483821 RBM33Q96EV2 1170 aaKnown RBP17.84■□□□□ 0.45
RXRB-205ENST00000483821 CADPS2Q86UW7 1296 aa17.83■□□□□ 0.44
RXRB-205ENST00000483821 NGEFQ8N5V2 710 aa17.83■□□□□ 0.44
RXRB-205ENST00000483821 BLMP54132 1417 aaPredicted RBP17.82■□□□□ 0.44
RXRB-205ENST00000483821 SSH2Q76I76 1423 aa17.82■□□□□ 0.44
RXRB-205ENST00000483821 STRCQ7RTU9 1775 aa17.82■□□□□ 0.44
RXRB-205ENST00000483821 MSH6P52701 1360 aa17.81■□□□□ 0.44
RXRB-205ENST00000483821 PSME1Q06323 249 aa17.81■□□□□ 0.44
RXRB-205ENST00000483821 PNNQ9H307 717 aaKnown RBP17.8■□□□□ 0.44
RXRB-205ENST00000483821 USP31Q70CQ4 1352 aa17.79■□□□□ 0.44
RXRB-205ENST00000483821 PDE3BQ13370 1112 aa17.79■□□□□ 0.44
RXRB-205ENST00000483821 POLKQ9UBT6 870 aa17.78■□□□□ 0.44
RXRB-205ENST00000483821 NRKQ7Z2Y5 1582 aa17.78■□□□□ 0.44
RXRB-205ENST00000483821 PNPLA6Q8IY17 1366 aa17.78■□□□□ 0.44
RXRB-205ENST00000483821 DIAPH1O60610 1272 aaKnown RBP17.77■□□□□ 0.44
RXRB-205ENST00000483821 RGPD8O14715 1765 aaPredicted RBP17.76■□□□□ 0.43
RXRB-205ENST00000483821 C1orf167Q5SNV9 1468 aa17.75■□□□□ 0.43
RXRB-205ENST00000483821 OVOS2A0A0J9YW53 1432 aa17.75■□□□□ 0.43
RXRB-205ENST00000483821 OVOS2Q6IE36 1432 aa17.75■□□□□ 0.43
RXRB-205ENST00000483821 PAK3O75914 559 aaPredicted RBP17.75■□□□□ 0.43
RXRB-205ENST00000483821 NLRP6P59044 892 aa17.75■□□□□ 0.43
RXRB-205ENST00000483821 ABTB2Q8N961 1025 aa17.75■□□□□ 0.43
RXRB-205ENST00000483821 ZRANB1Q9UGI0 708 aa17.75■□□□□ 0.43
RXRB-205ENST00000483821 PPM1GO15355 546 aaPredicted RBP17.74■□□□□ 0.43
RXRB-205ENST00000483821 U2AF1L5P0DN76 240 aaPredicted RBP17.74■□□□□ 0.43
RXRB-205ENST00000483821 U2AF1Q01081 240 aaKnown RBP eCLIP17.74■□□□□ 0.431e-7■■■□□ 17.4
RXRB-205ENST00000483821 RUNDC1Q96C34 613 aa17.74■□□□□ 0.43
RXRB-205ENST00000483821 ZNF335Q9H4Z2 1342 aaPredicted RBP17.73■□□□□ 0.43
RXRB-205ENST00000483821 SMG6Q86US8 1419 aaKnown RBP17.73■□□□□ 0.43
RXRB-205ENST00000483821 ORAI2Q96SN7 254 aa17.73■□□□□ 0.43
RXRB-205ENST00000483821 KIF1AQ12756 1690 aa17.73■□□□□ 0.43
RXRB-205ENST00000483821 STRCP1A6NGW2 1772 aa17.73■□□□□ 0.43
RXRB-205ENST00000483821 MST1RQ04912 1400 aa17.72■□□□□ 0.43
RXRB-205ENST00000483821 LRRC7Q96NW7 1537 aa17.72■□□□□ 0.43
RXRB-205ENST00000483821 CDK12Q9NYV4 1490 aaPredicted RBP17.72■□□□□ 0.43
RXRB-205ENST00000483821 NCBP3Q53F19 620 aaKnown RBP17.72■□□□□ 0.43
RXRB-205ENST00000483821 U2SURPO15042 1029 aaKnown RBP17.71■□□□□ 0.43
RXRB-205ENST00000483821 FOXO3O43524 673 aa17.71■□□□□ 0.43
RXRB-205ENST00000483821 NEFMP07197 916 aa17.7■□□□□ 0.42
RXRB-205ENST00000483821 KRT28Q7Z3Y7 464 aa17.7■□□□□ 0.42
RXRB-205ENST00000483821 EMILIN1Q9Y6C2 1016 aa17.7■□□□□ 0.42
RXRB-205ENST00000483821 COL3A1P02461 1466 aaPredicted RBP17.69■□□□□ 0.42
RXRB-205ENST00000483821 KIF24Q5T7B8 1368 aa17.69■□□□□ 0.42
RXRB-205ENST00000483821 FCHSD2O94868 740 aa17.69■□□□□ 0.42
RXRB-205ENST00000483821 KCNH5Q8NCM2 988 aa17.69■□□□□ 0.42
RXRB-205ENST00000483821 NPHP3Q7Z494 1330 aa17.69■□□□□ 0.42
RXRB-205ENST00000483821 APAF1O14727 1248 aa17.68■□□□□ 0.42
RXRB-205ENST00000483821 RRS1Q15050 365 aaKnown RBP17.68■□□□□ 0.42
RXRB-205ENST00000483821 CCDC146Q8IYE0 955 aa17.68■□□□□ 0.42
RXRB-205ENST00000483821 SHPRHQ149N8 1683 aa17.67■□□□□ 0.42
RXRB-205ENST00000483821 FBLN1P23142 703 aa17.66■□□□□ 0.42
RXRB-205ENST00000483821 IL13P35225 146 aa17.66■□□□□ 0.42
RXRB-205ENST00000483821 AMPHP49418 695 aa17.66■□□□□ 0.42
RXRB-205ENST00000483821 SLAIN2Q9P270 581 aa17.66■□□□□ 0.42
RXRB-205ENST00000483821 SALL2Q9Y467 1007 aaPredicted RBP17.66■□□□□ 0.42
RXRB-205ENST00000483821 MAPK8IP3Q9UPT6 1336 aa17.66■□□□□ 0.42
RXRB-205ENST00000483821 SBNO1A3KN83 1393 aa17.66■□□□□ 0.42
RXRB-205ENST00000483821 MAP2P11137 1827 aaKnown RBP17.65■□□□□ 0.42
RXRB-205ENST00000483821 GTF3C3Q9Y5Q9 886 aa17.65■□□□□ 0.42
RXRB-205ENST00000483821 PIK3C2AO00443 1686 aa17.64■□□□□ 0.42
RXRB-205ENST00000483821 USP54Q70EL1 1684 aa17.64■□□□□ 0.42
RXRB-205ENST00000483821 NEFLP07196 543 aa17.64■□□□□ 0.41
RXRB-205ENST00000483821 TCP11L2Q8N4U5 519 aa17.64■□□□□ 0.41
RXRB-205ENST00000483821 FLT4P35916 1363 aa17.64■□□□□ 0.41
RXRB-205ENST00000483821 GOLGA2Q08379 1002 aa17.63■□□□□ 0.41
RXRB-205ENST00000483821 CCDC27Q2M243 656 aa17.63■□□□□ 0.41
RXRB-205ENST00000483821 NUTM2GQ5VZR2 741 aa17.63■□□□□ 0.41
RXRB-205ENST00000483821 MAP3K19Q56UN5 1328 aa17.63■□□□□ 0.41
RXRB-205ENST00000483821 SOX12O15370 315 aa17.62■□□□□ 0.41
RXRB-205ENST00000483821 LMOD2Q6P5Q4 547 aa17.62■□□□□ 0.41
RXRB-205ENST00000483821 RTL1A6NKG5 1358 aa17.61■□□□□ 0.41
RXRB-205ENST00000483821 XPCQ01831 940 aaPredicted RBP17.6■□□□□ 0.41
RXRB-205ENST00000483821 BRINP3Q76B58 766 aa17.6■□□□□ 0.41
RXRB-205ENST00000483821 PLEKHF1Q96S99 279 aa17.6■□□□□ 0.41
RXRB-205ENST00000483821 ZNF521Q96K83 1311 aa17.6■□□□□ 0.41
RXRB-205ENST00000483821 XIRP1Q702N8 1843 aaKnown RBP17.59■□□□□ 0.41
RXRB-205ENST00000483821 SENP3-EIF4A1A0A087X0R7 540 aa17.59■□□□□ 0.41
RXRB-205ENST00000483821 EIF4A2Q14240 407 aaKnown RBP17.59■□□□□ 0.41
RXRB-205ENST00000483821 WDR63Q8IWG1 891 aa17.59■□□□□ 0.41
RXRB-205ENST00000483821 ARHGEF10O15013 1369 aa17.58■□□□□ 0.4
RXRB-205ENST00000483821 USP19O94966 1318 aa17.58■□□□□ 0.4
RXRB-205ENST00000483821 E9PSI1 815 aa17.58■□□□□ 0.4
RXRB-205ENST00000483821 GCP02774 474 aa17.58■□□□□ 0.4
RXRB-205ENST00000483821 HSP90AB2PQ58FF8 381 aa17.58■□□□□ 0.4
RXRB-205ENST00000483821 RSPH6AQ9H0K4 717 aa17.58■□□□□ 0.4
RXRB-205ENST00000483821 PRKAR2BP31323 418 aa17.57■□□□□ 0.4
RXRB-205ENST00000483821 WWC1Q8IX03 1113 aa17.57■□□□□ 0.4
RXRB-205ENST00000483821 IP6K1Q92551 441 aa17.57■□□□□ 0.4
RXRB-205ENST00000483821 HOXC9P31274 260 aa17.56■□□□□ 0.4
RXRB-205ENST00000483821 TMPOP42166 694 aaKnown RBP17.56■□□□□ 0.4
RXRB-205ENST00000483821 PHF23Q9BUL5 403 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms