RNA–Protein interactions for RNA: ENST00000483564.5

GABRE-208, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 3

Gene GABRE, Length 2,747 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-208ENST00000483564 CIZ1Q9ULV3 898 aaPredicted RBP11.45□□□□□ -0.58
GABRE-208ENST00000483564 CFAP74Q9C0B2 1584 aa11.45□□□□□ -0.58
GABRE-208ENST00000483564 ZMYM3Q14202 1370 aa11.45□□□□□ -0.58
GABRE-208ENST00000483564 PRDM15P57071 1507 aaPredicted RBP11.44□□□□□ -0.58
GABRE-208ENST00000483564 FANCAO15360 1455 aa11.44□□□□□ -0.58
GABRE-208ENST00000483564 ZNF500O60304 480 aaPredicted RBP11.44□□□□□ -0.58
GABRE-208ENST00000483564 BAG4O95429 457 aaKnown RBP11.44□□□□□ -0.58
GABRE-208ENST00000483564 TCP11L2Q8N4U5 519 aa11.44□□□□□ -0.58
GABRE-208ENST00000483564 PRIM1P49642 420 aaKnown RBP11.44□□□□□ -0.58
GABRE-208ENST00000483564 KLHL40Q2TBA0 621 aa11.44□□□□□ -0.58
GABRE-208ENST00000483564 CERS3Q8IU89 383 aa11.44□□□□□ -0.58
GABRE-208ENST00000483564 LNPKQ9C0E8 428 aa11.44□□□□□ -0.58
GABRE-208ENST00000483564 ATP2B3Q16720 1220 aa11.43□□□□□ -0.58
GABRE-208ENST00000483564 MCTP1Q6DN14 999 aa11.43□□□□□ -0.58
GABRE-208ENST00000483564 SECISBP2LQ93073 1101 aaKnown RBP11.43□□□□□ -0.58
GABRE-208ENST00000483564 CARD14Q9BXL6 1004 aa11.43□□□□□ -0.58
GABRE-208ENST00000483564 SPDYE4A6NLX3 237 aa11.43□□□□□ -0.58
GABRE-208ENST00000483564 CHAMP1Q96JM3 812 aa11.43□□□□□ -0.58
GABRE-208ENST00000483564 ZSCAN23Q3MJ62 389 aa11.42□□□□□ -0.58
GABRE-208ENST00000483564 CYB5RLQ6IPT4 315 aa11.42□□□□□ -0.58
GABRE-208ENST00000483564 DZIP1LQ8IYY4 767 aaKnown RBP11.42□□□□□ -0.58
GABRE-208ENST00000483564 RBM27Q9P2N5 1060 aaKnown RBP11.42□□□□□ -0.58
GABRE-208ENST00000483564 PKP1Q13835 747 aa11.42□□□□□ -0.58
GABRE-208ENST00000483564 FAM177BA6PVY3 158 aa11.41□□□□□ -0.58
GABRE-208ENST00000483564 GOLGA6L22H0YM25 854 aa11.41□□□□□ -0.58
GABRE-208ENST00000483564 K7ELQ4 463 aaPredicted RBP11.41□□□□□ -0.58
GABRE-208ENST00000483564 SASS6Q6UVJ0 657 aa11.41□□□□□ -0.58
GABRE-208ENST00000483564 ITPRIPQ8IWB1 547 aa11.41□□□□□ -0.58
GABRE-208ENST00000483564 MPNDQ8N594 471 aa11.41□□□□□ -0.58
GABRE-208ENST00000483564 ASXL1Q8IXJ9 1541 aa11.41□□□□□ -0.58
GABRE-208ENST00000483564 DUOX2Q9NRD8 1548 aa11.41□□□□□ -0.58
GABRE-208ENST00000483564 CD109Q6YHK3 1445 aa11.41□□□□□ -0.58
GABRE-208ENST00000483564 ZKSCAN2Q63HK3 967 aa11.41□□□□□ -0.58
GABRE-208ENST00000483564 TSR2Q969E8 191 aaKnown RBP11.41□□□□□ -0.58
GABRE-208ENST00000483564 PDLIM2Q96JY6 352 aa11.41□□□□□ -0.58
GABRE-208ENST00000483564 ZKSCAN5Q9Y2L8 839 aa11.41□□□□□ -0.58
GABRE-208ENST00000483564 FAM135AQ9P2D6 1515 aa11.4□□□□□ -0.58
GABRE-208ENST00000483564 TRIM27P14373 513 aa11.4□□□□□ -0.58
GABRE-208ENST00000483564 ZNF445P59923 1031 aa11.4□□□□□ -0.58
GABRE-208ENST00000483564 ADGRL1O94910 1474 aa11.4□□□□□ -0.58
GABRE-208ENST00000483564 TRAPPC8Q9Y2L5 1435 aa11.4□□□□□ -0.59
GABRE-208ENST00000483564 HS1BP3Q53T59 392 aa11.39□□□□□ -0.59
GABRE-208ENST00000483564 GLI2P10070 1586 aa11.39□□□□□ -0.59
GABRE-208ENST00000483564 HDAC1Q13547 482 aaPredicted RBP11.39□□□□□ -0.59
GABRE-208ENST00000483564 AEBP1Q8IUX7 1158 aa11.39□□□□□ -0.59
GABRE-208ENST00000483564 LMBRD1Q9NUN5 540 aa11.39□□□□□ -0.59
GABRE-208ENST00000483564 IRX5P78411 483 aaPredicted RBP11.38□□□□□ -0.59
GABRE-208ENST00000483564 ZNF710Q8N1W2 664 aa11.38□□□□□ -0.59
GABRE-208ENST00000483564 RNF214Q8ND24 703 aa11.38□□□□□ -0.59
GABRE-208ENST00000483564 SPAG9O60271 1321 aaKnown RBP11.38□□□□□ -0.59
GABRE-208ENST00000483564 PRPF40AO75400 957 aaKnown RBP11.38□□□□□ -0.59
GABRE-208ENST00000483564 PTMSP20962 102 aa11.38□□□□□ -0.59
GABRE-208ENST00000483564 ZNF771Q7L3S4 317 aaPredicted RBP11.38□□□□□ -0.59
GABRE-208ENST00000483564 NGEFQ8N5V2 710 aa11.38□□□□□ -0.59
GABRE-208ENST00000483564 RUNDC1Q96C34 613 aa11.38□□□□□ -0.59
GABRE-208ENST00000483564 CDCA8Q53HL2 280 aa11.37□□□□□ -0.59
GABRE-208ENST00000483564 TEX2Q8IWB9 1127 aa11.37□□□□□ -0.59
GABRE-208ENST00000483564 SCAPERQ9BY12 1400 aa11.37□□□□□ -0.59
GABRE-208ENST00000483564 SMC4Q9NTJ3 1288 aa11.37□□□□□ -0.59
GABRE-208ENST00000483564 UNC13BO14795 1591 aa11.37□□□□□ -0.59
GABRE-208ENST00000483564 CSPP1Q1MSJ5 1256 aa11.37□□□□□ -0.59
GABRE-208ENST00000483564 GPT2Q8TD30 523 aa11.37□□□□□ -0.59
GABRE-208ENST00000483564 NSFL1CQ9UNZ2 370 aaKnown RBP11.37□□□□□ -0.59
GABRE-208ENST00000483564 IBTKQ9P2D0 1353 aaPredicted RBP11.37□□□□□ -0.59
GABRE-208ENST00000483564 KCNJ4P48050 445 aa11.37□□□□□ -0.59
GABRE-208ENST00000483564 IRX3P78415 501 aaPredicted RBP11.37□□□□□ -0.59
GABRE-208ENST00000483564 TAF3Q5VWG9 929 aa11.37□□□□□ -0.59
GABRE-208ENST00000483564 PHF23Q9BUL5 403 aaPredicted RBP11.37□□□□□ -0.59
GABRE-208ENST00000483564 NEO1Q92859 1461 aa11.37□□□□□ -0.59
GABRE-208ENST00000483564 ZFYVE16Q7Z3T8 1539 aa11.36□□□□□ -0.59
GABRE-208ENST00000483564 MAP3K4Q9Y6R4 1608 aa11.36□□□□□ -0.59
GABRE-208ENST00000483564 CLEC17AQ6ZS10 378 aa11.36□□□□□ -0.59
GABRE-208ENST00000483564 WDR63Q8IWG1 891 aa11.36□□□□□ -0.59
GABRE-208ENST00000483564 TMEM57Q8N5G2 664 aa11.36□□□□□ -0.59
GABRE-208ENST00000483564 SSH1Q8WYL5 1049 aa11.36□□□□□ -0.59
GABRE-208ENST00000483564 INO80Q9ULG1 1556 aaPredicted RBP11.36□□□□□ -0.59
GABRE-208ENST00000483564 SYCE3A1L190 88 aa11.36□□□□□ -0.59
GABRE-208ENST00000483564 NUCB1Q02818 461 aa11.36□□□□□ -0.59
GABRE-208ENST00000483564 TBC1D9Q6ZT07 1266 aa11.36□□□□□ -0.59
GABRE-208ENST00000483564 NOB1Q9ULX3 412 aaKnown RBP11.36□□□□□ -0.59
GABRE-208ENST00000483564 EXOSC9Q06265 439 aaKnown RBP11.35□□□□□ -0.59
GABRE-208ENST00000483564 CHD1LQ86WJ1 897 aa11.35□□□□□ -0.59
GABRE-208ENST00000483564 ZNF518AQ6AHZ1 1483 aa11.35□□□□□ -0.59
GABRE-208ENST00000483564 ATP7AQ04656 1500 aa11.35□□□□□ -0.59
GABRE-208ENST00000483564 FOXD4L5Q5VV16 416 aaPredicted RBP11.35□□□□□ -0.59
GABRE-208ENST00000483564 AFAP1Q8N556 730 aa11.35□□□□□ -0.59
GABRE-208ENST00000483564 FOXD4L4Q8WXT5 416 aaPredicted RBP11.35□□□□□ -0.59
GABRE-208ENST00000483564 ZBTB9Q96C00 473 aa11.35□□□□□ -0.59
GABRE-208ENST00000483564 TMEM63CQ9P1W3 806 aa11.35□□□□□ -0.59
GABRE-208ENST00000483564 NPC1L1Q9UHC9 1359 aa11.35□□□□□ -0.59
GABRE-208ENST00000483564 ANKRD45Q5TZF3 282 aa11.34□□□□□ -0.59
GABRE-208ENST00000483564 C17orf53Q8N3J3 647 aaPredicted RBP11.34□□□□□ -0.59
GABRE-208ENST00000483564 ZBTB40Q9NUA8 1239 aa11.34□□□□□ -0.59
GABRE-208ENST00000483564 DDX19BQ9UMR2 479 aa11.34□□□□□ -0.59
GABRE-208ENST00000483564 BRD2P25440 801 aaKnown RBP11.33□□□□□ -0.6
GABRE-208ENST00000483564 ZGPATQ8N5A5 531 aaKnown RBP11.33□□□□□ -0.6
GABRE-208ENST00000483564 RGS22Q8NE09 1264 aa11.33□□□□□ -0.6
GABRE-208ENST00000483564 IQGAP3Q86VI3 1631 aa11.33□□□□□ -0.6
GABRE-208ENST00000483564 ATF7IPQ6VMQ6 1270 aa11.33□□□□□ -0.6
GABRE-208ENST00000483564 MORC1Q86VD1 984 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms