RNA–Protein interactions for RNA: ENST00000483457.1

EEFSEC-202, Transcript of eukaryotic elongation factor, selenocysteine-tRNA specific, humanhuman

TSL 5 BASIC

Gene EEFSEC, Length 1,859 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEFSEC-202ENST00000483457 MTHFSP49914 203 aa21.67■■□□□ 1.06
EEFSEC-202ENST00000483457 TCP11L2Q8N4U5 519 aa21.67■■□□□ 1.06
EEFSEC-202ENST00000483457 ABCC11Q96J66 1382 aa21.67■■□□□ 1.06
EEFSEC-202ENST00000483457 ZNF335Q9H4Z2 1342 aaPredicted RBP21.67■■□□□ 1.06
EEFSEC-202ENST00000483457 ATAD2Q6PL18 1390 aa21.66■■□□□ 1.06
EEFSEC-202ENST00000483457 CT47B1P0C2W7 299 aaPredicted RBP21.64■■□□□ 1.06
EEFSEC-202ENST00000483457 C8orf34Q49A92 452 aa21.64■■□□□ 1.06
EEFSEC-202ENST00000483457 CLUAP1Q96AJ1 413 aa21.64■■□□□ 1.05
EEFSEC-202ENST00000483457 MAPK8IP3Q9UPT6 1336 aa21.63■■□□□ 1.05
EEFSEC-202ENST00000483457 MYH16Q9H6N6 1097 aa21.63■■□□□ 1.05
EEFSEC-202ENST00000483457 TBX22Q9Y458 520 aa21.63■■□□□ 1.05
EEFSEC-202ENST00000483457 RARSP54136 660 aaKnown RBP21.62■■□□□ 1.05
EEFSEC-202ENST00000483457 CANXP27824 592 aaKnown RBP21.61■■□□□ 1.05
EEFSEC-202ENST00000483457 PMFBP1Q8TBY8 1022 aa21.6■■□□□ 1.05
EEFSEC-202ENST00000483457 TERF2IPQ9NYB0 399 aa21.58■■□□□ 1.05
EEFSEC-202ENST00000483457 ADAMTS13Q76LX8 1427 aa21.58■■□□□ 1.05
EEFSEC-202ENST00000483457 A0A1W2PP64 1363 aa21.58■■□□□ 1.04
EEFSEC-202ENST00000483457 TNNT2P45379 298 aaPredicted RBP21.58■■□□□ 1.04
EEFSEC-202ENST00000483457 SKAP1Q86WV1 359 aa21.58■■□□□ 1.04
EEFSEC-202ENST00000483457 YTHDC2Q9H6S0 1430 aaKnown RBP21.57■■□□□ 1.04
EEFSEC-202ENST00000483457 COL3A1P02461 1466 aaPredicted RBP21.56■■□□□ 1.04
EEFSEC-202ENST00000483457 KCNA6P17658 529 aa21.56■■□□□ 1.04
EEFSEC-202ENST00000483457 CABP2Q9NPB3 220 aa21.56■■□□□ 1.04
EEFSEC-202ENST00000483457 IGHDP01880 384 aa21.55■■□□□ 1.04
EEFSEC-202ENST00000483457 PNNQ9H307 717 aaKnown RBP21.55■■□□□ 1.04
EEFSEC-202ENST00000483457 DAXXQ9UER7 740 aaPredicted RBP21.55■■□□□ 1.04
EEFSEC-202ENST00000483457 DLC1Q96QB1 1528 aa21.55■■□□□ 1.04
EEFSEC-202ENST00000483457 ALKQ9UM73 1620 aa21.54■■□□□ 1.04
EEFSEC-202ENST00000483457 IL16Q14005 1332 aa21.54■■□□□ 1.04
EEFSEC-202ENST00000483457 U2AF1L5P0DN76 240 aaPredicted RBP21.54■■□□□ 1.04
EEFSEC-202ENST00000483457 U2AF1Q01081 240 aaKnown RBP eCLIP21.54■■□□□ 1.04
EEFSEC-202ENST00000483457 COG6Q9Y2V7 657 aa21.54■■□□□ 1.04
EEFSEC-202ENST00000483457 KIF20BQ96Q89 1820 aa21.53■■□□□ 1.04
EEFSEC-202ENST00000483457 RGS3P49796 1198 aa21.53■■□□□ 1.04
EEFSEC-202ENST00000483457 NEUROD2Q15784 382 aa21.53■■□□□ 1.04
EEFSEC-202ENST00000483457 METP08581 1390 aa21.53■■□□□ 1.04
EEFSEC-202ENST00000483457 SRPK2P78362 688 aaKnown RBP21.52■■□□□ 1.04
EEFSEC-202ENST00000483457 PANK1Q8TE04 598 aa21.52■■□□□ 1.04
EEFSEC-202ENST00000483457 RRP7AQ9Y3A4 280 aaKnown RBP21.52■■□□□ 1.04
EEFSEC-202ENST00000483457 NEFMP07197 916 aa21.52■■□□□ 1.03
EEFSEC-202ENST00000483457 AMOTL2Q9Y2J4 779 aa21.52■■□□□ 1.03
EEFSEC-202ENST00000483457 CD163L1Q9NR16 1453 aa21.51■■□□□ 1.03
EEFSEC-202ENST00000483457 CERKQ8TCT0 537 aa21.51■■□□□ 1.03
EEFSEC-202ENST00000483457 CDC42BPGQ6DT37 1551 aa21.51■■□□□ 1.03
EEFSEC-202ENST00000483457 PLEKHF1Q96S99 279 aa21.5■■□□□ 1.03
EEFSEC-202ENST00000483457 PNPLA6Q8IY17 1366 aa21.5■■□□□ 1.03
EEFSEC-202ENST00000483457 PIK3R4Q99570 1358 aa21.5■■□□□ 1.03
EEFSEC-202ENST00000483457 FRAT1Q92837 279 aaPredicted RBP21.49■■□□□ 1.03
EEFSEC-202ENST00000483457 HDGFL2Q7Z4V5 671 aaPredicted RBP21.49■■□□□ 1.03
EEFSEC-202ENST00000483457 PROSER2Q86WR7 435 aaPredicted RBP21.49■■□□□ 1.03
EEFSEC-202ENST00000483457 RBM33Q96EV2 1170 aaKnown RBP21.49■■□□□ 1.03
EEFSEC-202ENST00000483457 POGKQ9P215 609 aa21.48■■□□□ 1.03
EEFSEC-202ENST00000483457 NRXN3Q9Y4C0 1643 aa21.47■■□□□ 1.03
EEFSEC-202ENST00000483457 RWDD1Q9H446 243 aaPredicted RBP21.47■■□□□ 1.03
EEFSEC-202ENST00000483457 LAS1LQ9Y4W2 734 aaKnown RBP21.47■■□□□ 1.03
EEFSEC-202ENST00000483457 LTBP4Q8N2S1 1624 aa21.47■■□□□ 1.03
EEFSEC-202ENST00000483457 DIP2AQ14689 1571 aa21.47■■□□□ 1.03
EEFSEC-202ENST00000483457 FYB1O15117 783 aa21.47■■□□□ 1.03
EEFSEC-202ENST00000483457 PRAM1Q96QH2 718 aa21.47■■□□□ 1.03
EEFSEC-202ENST00000483457 STK26Q9P289 416 aa21.47■■□□□ 1.03
EEFSEC-202ENST00000483457 ZKSCAN2Q63HK3 967 aa21.46■■□□□ 1.03
EEFSEC-202ENST00000483457 ATP7BP35670 1465 aa21.46■■□□□ 1.03
EEFSEC-202ENST00000483457 TMPOP42166 694 aaKnown RBP21.45■■□□□ 1.02
EEFSEC-202ENST00000483457 PTPRUQ92729 1446 aa21.45■■□□□ 1.02
EEFSEC-202ENST00000483457 MVPQ14764 893 aaKnown RBP21.45■■□□□ 1.02
EEFSEC-202ENST00000483457 SETD1AO15047 1707 aaKnown RBP21.44■■□□□ 1.02
EEFSEC-202ENST00000483457 CPS1P31327 1500 aa21.43■■□□□ 1.02
EEFSEC-202ENST00000483457 RLBP1P12271 317 aa21.42■■□□□ 1.02
EEFSEC-202ENST00000483457 SAFB2Q14151 953 aaKnown RBP eCLIP21.42■■□□□ 1.02
EEFSEC-202ENST00000483457 DZIP1LQ8IYY4 767 aaKnown RBP21.42■■□□□ 1.02
EEFSEC-202ENST00000483457 GGNBP2Q9H3C7 697 aa21.42■■□□□ 1.02
EEFSEC-202ENST00000483457 MINK1Q8N4C8 1332 aaPredicted RBP21.42■■□□□ 1.02
EEFSEC-202ENST00000483457 DIAPH1O60610 1272 aaKnown RBP21.41■■□□□ 1.02
EEFSEC-202ENST00000483457 PCDHB15Q9Y5E8 787 aa21.41■■□□□ 1.02
EEFSEC-202ENST00000483457 TMEM94Q12767 1356 aa21.41■■□□□ 1.02
EEFSEC-202ENST00000483457 C14orf37Q86TY3 774 aa21.41■■□□□ 1.02
EEFSEC-202ENST00000483457 CDK19Q9BWU1 502 aa21.41■■□□□ 1.02
EEFSEC-202ENST00000483457 TRIM35Q9UPQ4 493 aa21.41■■□□□ 1.02
EEFSEC-202ENST00000483457 U2SURPO15042 1029 aaKnown RBP21.4■■□□□ 1.02
EEFSEC-202ENST00000483457 LRRC7Q96NW7 1537 aa21.39■■□□□ 1.02
EEFSEC-202ENST00000483457 FCHSD2O94868 740 aa21.39■■□□□ 1.02
EEFSEC-202ENST00000483457 ZNF428Q96B54 188 aa21.39■■□□□ 1.02
EEFSEC-202ENST00000483457 USP19O94966 1318 aa21.38■■□□□ 1.01
EEFSEC-202ENST00000483457 STRCP1A6NGW2 1772 aa21.38■■□□□ 1.01
EEFSEC-202ENST00000483457 FTSJ3Q8IY81 847 aaKnown RBP21.38■■□□□ 1.01
EEFSEC-202ENST00000483457 DDX19BQ9UMR2 479 aa21.37■■□□□ 1.01
EEFSEC-202ENST00000483457 BECN1Q14457 450 aa21.37■■□□□ 1.01
EEFSEC-202ENST00000483457 NFKBIBQ15653 356 aa21.37■■□□□ 1.01
EEFSEC-202ENST00000483457 PPIP5K1Q6PFW1 1433 aa21.36■■□□□ 1.01
EEFSEC-202ENST00000483457 EXOSC9Q06265 439 aaKnown RBP21.36■■□□□ 1.01
EEFSEC-202ENST00000483457 HDAC1Q13547 482 aaPredicted RBP21.36■■□□□ 1.01
EEFSEC-202ENST00000483457 ALDH1L2Q3SY69 923 aa21.36■■□□□ 1.01
EEFSEC-202ENST00000483457 UPF2Q9HAU5 1272 aaKnown RBP21.36■■□□□ 1.01
EEFSEC-202ENST00000483457 SMC4Q9NTJ3 1288 aa21.36■■□□□ 1.01
EEFSEC-202ENST00000483457 PDZRN3Q9UPQ7 1066 aa21.36■■□□□ 1.01
EEFSEC-202ENST00000483457 KIF16BQ96L93 1317 aa21.36■■□□□ 1.01
EEFSEC-202ENST00000483457 CHD2O14647 1828 aaKnown RBP21.35■■□□□ 1.01
EEFSEC-202ENST00000483457 NWD1Q149M9 1564 aa21.35■■□□□ 1.01
EEFSEC-202ENST00000483457 IPO8O15397 1037 aaKnown RBP21.35■■□□□ 1.01
EEFSEC-202ENST00000483457 ROBO2Q9HCK4 1378 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms