RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 PLEKHG5O94827 1062 aa24.67■■□□□ 1.54
CPNE1-224ENST00000483359 LRRC59Q96AG4 307 aaKnown RBP24.67■■□□□ 1.54
CPNE1-224ENST00000483359 ZNF692Q9BU19 519 aaPredicted RBP24.67■■□□□ 1.54
CPNE1-224ENST00000483359 SPATA31A3Q5VYP0 1347 aa24.66■■□□□ 1.54
CPNE1-224ENST00000483359 SBNO1A3KN83 1393 aa24.65■■□□□ 1.54
CPNE1-224ENST00000483359 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.65■■□□□ 1.54
CPNE1-224ENST00000483359 ALS2Q96Q42 1657 aa24.64■■□□□ 1.53
CPNE1-224ENST00000483359 NUTM2GQ5VZR2 741 aa24.63■■□□□ 1.53
CPNE1-224ENST00000483359 PANK3Q9H999 370 aa24.63■■□□□ 1.53
CPNE1-224ENST00000483359 SSH2Q76I76 1423 aa24.62■■□□□ 1.53
CPNE1-224ENST00000483359 PNPLA6Q8IY17 1366 aa24.62■■□□□ 1.53
CPNE1-224ENST00000483359 TTC21BQ7Z4L5 1316 aa24.62■■□□□ 1.53
CPNE1-224ENST00000483359 EDC4Q6P2E9 1401 aaKnown RBP24.62■■□□□ 1.53
CPNE1-224ENST00000483359 JCADQ9P266 1359 aa24.62■■□□□ 1.53
CPNE1-224ENST00000483359 NSD3Q9BZ95 1437 aa24.61■■□□□ 1.53
CPNE1-224ENST00000483359 SHPRHQ149N8 1683 aa24.61■■□□□ 1.53
CPNE1-224ENST00000483359 PIK3C2AO00443 1686 aa24.6■■□□□ 1.53
CPNE1-224ENST00000483359 ABTB2Q8N961 1025 aa24.6■■□□□ 1.53
CPNE1-224ENST00000483359 CARD14Q9BXL6 1004 aa24.6■■□□□ 1.53
CPNE1-224ENST00000483359 ARHGEF10O15013 1369 aa24.59■■□□□ 1.53
CPNE1-224ENST00000483359 BRD4O60885 1362 aaPredicted RBP24.58■■□□□ 1.53
CPNE1-224ENST00000483359 ZNF316A6NFI3 1004 aaPredicted RBP24.58■■□□□ 1.52
CPNE1-224ENST00000483359 NME9Q86XW9 330 aa24.57■■□□□ 1.52
CPNE1-224ENST00000483359 CABLES1Q8TDN4 633 aa24.56■■□□□ 1.52
CPNE1-224ENST00000483359 TTC21AQ8NDW8 1320 aa24.56■■□□□ 1.52
CPNE1-224ENST00000483359 COL22A1Q8NFW1 1626 aaPredicted RBP24.56■■□□□ 1.52
CPNE1-224ENST00000483359 ZRANB1Q9UGI0 708 aa24.55■■□□□ 1.52
CPNE1-224ENST00000483359 NUTM2BA6NNL0 878 aaPredicted RBP24.54■■□□□ 1.52
CPNE1-224ENST00000483359 NUTM2EB1AL46 878 aaPredicted RBP24.54■■□□□ 1.52
CPNE1-224ENST00000483359 NUTM2AQ8IVF1 878 aaPredicted RBP24.54■■□□□ 1.52
CPNE1-224ENST00000483359 NLRP6P59044 892 aa24.54■■□□□ 1.52
CPNE1-224ENST00000483359 KIF20BQ96Q89 1820 aa24.53■■□□□ 1.52
CPNE1-224ENST00000483359 ABCA3Q99758 1704 aa24.52■■□□□ 1.52
CPNE1-224ENST00000483359 MED1Q15648 1581 aaPredicted RBP24.52■■□□□ 1.52
CPNE1-224ENST00000483359 HAP1P54257 671 aaPredicted RBP24.51■■□□□ 1.51
CPNE1-224ENST00000483359 MARF1Q9Y4F3 1742 aaKnown RBP24.51■■□□□ 1.51
CPNE1-224ENST00000483359 CRYBG1Q9Y4K1 1723 aa24.51■■□□□ 1.51
CPNE1-224ENST00000483359 DDX10Q13206 875 aaKnown RBP24.51■■□□□ 1.51
CPNE1-224ENST00000483359 GGNBP2Q9H3C7 697 aa24.51■■□□□ 1.51
CPNE1-224ENST00000483359 PHRF1Q9P1Y6 1649 aaKnown RBP24.5■■□□□ 1.51
CPNE1-224ENST00000483359 SOX12O15370 315 aa24.49■■□□□ 1.51
CPNE1-224ENST00000483359 NLRP13Q86W25 1043 aa24.49■■□□□ 1.51
CPNE1-224ENST00000483359 KNSTRNQ9Y448 316 aa24.49■■□□□ 1.51
CPNE1-224ENST00000483359 LRP6O75581 1613 aa24.49■■□□□ 1.51
CPNE1-224ENST00000483359 SPATA31A6Q5VVP1 1343 aa24.49■■□□□ 1.51
CPNE1-224ENST00000483359 CGNL1Q0VF96 1302 aa24.48■■□□□ 1.51
CPNE1-224ENST00000483359 FYB1O15117 783 aa24.48■■□□□ 1.51
CPNE1-224ENST00000483359 CNGB1Q14028 1251 aaPredicted RBP24.48■■□□□ 1.51
CPNE1-224ENST00000483359 OVOS2A0A0J9YW53 1432 aa24.46■■□□□ 1.51
CPNE1-224ENST00000483359 OVOS2Q6IE36 1432 aa24.46■■□□□ 1.51
CPNE1-224ENST00000483359 ADAMTS2O95450 1211 aa24.46■■□□□ 1.51
CPNE1-224ENST00000483359 USP19O94966 1318 aa24.45■■□□□ 1.5
CPNE1-224ENST00000483359 PER1O15534 1290 aaPredicted RBP24.45■■□□□ 1.5
CPNE1-224ENST00000483359 COG3Q96JB2 828 aa24.45■■□□□ 1.5
CPNE1-224ENST00000483359 USP31Q70CQ4 1352 aa24.45■■□□□ 1.5
CPNE1-224ENST00000483359 USP54Q70EL1 1684 aa24.45■■□□□ 1.5
CPNE1-224ENST00000483359 SLIT3O75094 1523 aa24.43■■□□□ 1.5
CPNE1-224ENST00000483359 GCP02774 474 aa24.42■■□□□ 1.5
CPNE1-224ENST00000483359 MEX3CQ5U5Q3 659 aaKnown RBP24.42■■□□□ 1.5
CPNE1-224ENST00000483359 ZC3H6P61129 1189 aaKnown RBP24.41■■□□□ 1.5
CPNE1-224ENST00000483359 ZBTB7CA1YPR0 619 aa24.4■■□□□ 1.5
CPNE1-224ENST00000483359 AMER1Q5JTC6 1135 aaPredicted RBP24.4■■□□□ 1.5
CPNE1-224ENST00000483359 CC2D1BQ5T0F9 858 aaKnown RBP24.4■■□□□ 1.5
CPNE1-224ENST00000483359 ANKRD26Q9UPS8 1709 aa24.4■■□□□ 1.5
CPNE1-224ENST00000483359 FBLN1P23142 703 aa24.38■■□□□ 1.49
CPNE1-224ENST00000483359 KIAA0232Q92628 1395 aa24.38■■□□□ 1.49
CPNE1-224ENST00000483359 NFAT5O94916 1531 aa24.37■■□□□ 1.49
CPNE1-224ENST00000483359 TNNT2P45379 298 aaPredicted RBP24.37■■□□□ 1.49
CPNE1-224ENST00000483359 C8orf37Q96NL8 207 aa24.37■■□□□ 1.49
CPNE1-224ENST00000483359 NSD2O96028 1365 aa24.37■■□□□ 1.49
CPNE1-224ENST00000483359 KCNH5Q8NCM2 988 aa24.36■■□□□ 1.49
CPNE1-224ENST00000483359 CHRNA2Q15822 529 aa24.34■■□□□ 1.49
CPNE1-224ENST00000483359 PRDM11Q9NQV5 511 aa24.34■■□□□ 1.49
CPNE1-224ENST00000483359 MORC1Q86VD1 984 aa24.33■■□□□ 1.49
CPNE1-224ENST00000483359 LTN1O94822 1766 aa24.33■■□□□ 1.49
CPNE1-224ENST00000483359 RRS1Q15050 365 aaKnown RBP24.31■■□□□ 1.48
CPNE1-224ENST00000483359 NGLY1Q96IV0 654 aa24.31■■□□□ 1.48
CPNE1-224ENST00000483359 PLCH1Q4KWH8 1693 aa24.31■■□□□ 1.48
CPNE1-224ENST00000483359 FAM83GA6ND36 823 aa24.31■■□□□ 1.48
CPNE1-224ENST00000483359 CPDO75976 1380 aa24.3■■□□□ 1.48
CPNE1-224ENST00000483359 COL14A1Q05707 1796 aaKnown RBP24.29■■□□□ 1.48
CPNE1-224ENST00000483359 NPC1L1Q9UHC9 1359 aa24.29■■□□□ 1.48
CPNE1-224ENST00000483359 ARHGEF25Q86VW2 580 aa24.28■■□□□ 1.48
CPNE1-224ENST00000483359 MAP3K19Q56UN5 1328 aa24.27■■□□□ 1.48
CPNE1-224ENST00000483359 AFF2P51816 1311 aa24.26■■□□□ 1.47
CPNE1-224ENST00000483359 BTG4Q9NY30 223 aa24.25■■□□□ 1.47
CPNE1-224ENST00000483359 EMILIN1Q9Y6C2 1016 aa24.25■■□□□ 1.47
CPNE1-224ENST00000483359 PPM1GO15355 546 aaPredicted RBP24.25■■□□□ 1.47
CPNE1-224ENST00000483359 PHF23Q9BUL5 403 aaPredicted RBP24.25■■□□□ 1.47
CPNE1-224ENST00000483359 LMO7Q8WWI1 1683 aa24.25■■□□□ 1.47
CPNE1-224ENST00000483359 MAP2P11137 1827 aaKnown RBP24.24■■□□□ 1.47
CPNE1-224ENST00000483359 SLIT2O94813 1529 aa24.23■■□□□ 1.47
CPNE1-224ENST00000483359 PEAK1Q9H792 1746 aa24.23■■□□□ 1.47
CPNE1-224ENST00000483359 COL18A1P39060 1754 aa24.23■■□□□ 1.47
CPNE1-224ENST00000483359 RGPD5Q99666 1765 aa24.23■■□□□ 1.47
CPNE1-224ENST00000483359 AMPHP49418 695 aa24.23■■□□□ 1.47
CPNE1-224ENST00000483359 CAMTA1Q9Y6Y1 1673 aa24.23■■□□□ 1.47
CPNE1-224ENST00000483359 AATKQ6ZMQ8 1374 aa24.23■■□□□ 1.47
CPNE1-224ENST00000483359 AXIN2Q9Y2T1 843 aa24.22■■□□□ 1.47
CPNE1-224ENST00000483359 USP21Q9UK80 565 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms