RNA–Protein interactions for RNA: ENST00000483281.5

RXRB-204, Transcript of retinoid X receptor beta, humanhuman

TSL 5

Gene RXRB, Length 1,977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-204ENST00000483281 AMER1Q5JTC6 1135 aaPredicted RBP28.35■■■□□ 2.13
RXRB-204ENST00000483281 DIEXFQ68CQ4 756 aaKnown RBP28.35■■■□□ 2.13
RXRB-204ENST00000483281 CGNL1Q0VF96 1302 aa28.35■■■□□ 2.13
RXRB-204ENST00000483281 MYT1Q01538 1121 aa28.33■■■□□ 2.13
RXRB-204ENST00000483281 SOS2Q07890 1332 aaPredicted RBP28.33■■■□□ 2.13
RXRB-204ENST00000483281 PXDNQ92626 1479 aa28.32■■■□□ 2.12
RXRB-204ENST00000483281 TRPM3Q9HCF6 1732 aaPredicted RBP28.32■■■□□ 2.12
RXRB-204ENST00000483281 SBNO1A3KN83 1393 aa28.31■■■□□ 2.12
RXRB-204ENST00000483281 NSD2O96028 1365 aa28.31■■■□□ 2.12
RXRB-204ENST00000483281 FYB1O15117 783 aa28.31■■■□□ 2.12
RXRB-204ENST00000483281 AHDC1Q5TGY3 1603 aaPredicted RBP28.3■■■□□ 2.12
RXRB-204ENST00000483281 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.29■■■□□ 2.12
RXRB-204ENST00000483281 DDX17Q92841 729 aaKnown RBP28.29■■■□□ 2.12
RXRB-204ENST00000483281 KIF20BQ96Q89 1820 aa28.29■■■□□ 2.12
RXRB-204ENST00000483281 PIP4K2BP78356 416 aa28.28■■■□□ 2.12
RXRB-204ENST00000483281 XPCQ01831 940 aaPredicted RBP28.26■■■□□ 2.11
RXRB-204ENST00000483281 USP31Q70CQ4 1352 aa28.25■■■□□ 2.11
RXRB-204ENST00000483281 PAK3O75914 559 aaPredicted RBP28.25■■■□□ 2.11
RXRB-204ENST00000483281 ALS2Q96Q42 1657 aa28.24■■■□□ 2.11
RXRB-204ENST00000483281 ANKRD26Q9UPS8 1709 aa28.24■■■□□ 2.11
RXRB-204ENST00000483281 NME9Q86XW9 330 aa28.24■■■□□ 2.11
RXRB-204ENST00000483281 SPATA31A3Q5VYP0 1347 aa28.23■■■□□ 2.11
RXRB-204ENST00000483281 ABTB2Q8N961 1025 aa28.23■■■□□ 2.11
RXRB-204ENST00000483281 USP54Q70EL1 1684 aa28.23■■■□□ 2.11
RXRB-204ENST00000483281 PIK3C2AO00443 1686 aa28.22■■■□□ 2.11
RXRB-204ENST00000483281 CC2D1BQ5T0F9 858 aaKnown RBP28.22■■■□□ 2.11
RXRB-204ENST00000483281 GGNBP2Q9H3C7 697 aa28.21■■■□□ 2.11
RXRB-204ENST00000483281 ANP32CO43423 234 aa28.2■■■□□ 2.11
RXRB-204ENST00000483281 RALBP1Q15311 655 aa28.2■■■□□ 2.11
RXRB-204ENST00000483281 TNS3Q68CZ2 1445 aa28.2■■■□□ 2.11
RXRB-204ENST00000483281 LRRC59Q96AG4 307 aaKnown RBP28.2■■■□□ 2.1
RXRB-204ENST00000483281 PRKRIP1Q9H875 184 aaPredicted RBP28.2■■■□□ 2.1
RXRB-204ENST00000483281 COG3Q96JB2 828 aa28.19■■■□□ 2.1
RXRB-204ENST00000483281 PHLPP1O60346 1717 aa28.19■■■□□ 2.1
RXRB-204ENST00000483281 NLRP13Q86W25 1043 aa28.19■■■□□ 2.1
RXRB-204ENST00000483281 ARHGEF10O15013 1369 aa28.18■■■□□ 2.1
RXRB-204ENST00000483281 PARD3Q8TEW0 1356 aa28.18■■■□□ 2.1
RXRB-204ENST00000483281 NLRP6P59044 892 aa28.18■■■□□ 2.1
RXRB-204ENST00000483281 OVOS2A0A0J9YW53 1432 aa28.18■■■□□ 2.1
RXRB-204ENST00000483281 OVOS2Q6IE36 1432 aa28.18■■■□□ 2.1
RXRB-204ENST00000483281 MORC1Q86VD1 984 aa28.17■■■□□ 2.1
RXRB-204ENST00000483281 ZRANB1Q9UGI0 708 aa28.17■■■□□ 2.1
RXRB-204ENST00000483281 COL16A1Q07092 1604 aaPredicted RBP28.15■■■□□ 2.1
RXRB-204ENST00000483281 MARF1Q9Y4F3 1742 aaKnown RBP28.15■■■□□ 2.1
RXRB-204ENST00000483281 CENPBP07199 599 aaPredicted RBP28.14■■■□□ 2.1
RXRB-204ENST00000483281 LMOD2Q6P5Q4 547 aa28.12■■■□□ 2.09
RXRB-204ENST00000483281 USP19O94966 1318 aa28.11■■■□□ 2.09
RXRB-204ENST00000483281 NUTM2GQ5VZR2 741 aa28.1■■■□□ 2.09
RXRB-204ENST00000483281 CNGB1Q14028 1251 aaPredicted RBP28.1■■■□□ 2.09
RXRB-204ENST00000483281 AATKQ6ZMQ8 1374 aa28.09■■■□□ 2.09
RXRB-204ENST00000483281 MED1Q15648 1581 aaPredicted RBP28.08■■■□□ 2.09
RXRB-204ENST00000483281 KCNH5Q8NCM2 988 aa28.08■■■□□ 2.09
RXRB-204ENST00000483281 SLIT3O75094 1523 aa28.08■■■□□ 2.09
RXRB-204ENST00000483281 GTF3C3Q9Y5Q9 886 aa28.06■■■□□ 2.08
RXRB-204ENST00000483281 COL22A1Q8NFW1 1626 aaPredicted RBP28.06■■■□□ 2.08
RXRB-204ENST00000483281 MYBBP1AQ9BQG0 1328 aaKnown RBP28.05■■■□□ 2.08
RXRB-204ENST00000483281 CRYBG1Q9Y4K1 1723 aa28.05■■■□□ 2.08
RXRB-204ENST00000483281 MAP2P11137 1827 aaKnown RBP28.05■■■□□ 2.08
RXRB-204ENST00000483281 PPP2R1AP30153 589 aa28.04■■■□□ 2.08
RXRB-204ENST00000483281 GCP02774 474 aa28.04■■■□□ 2.08
RXRB-204ENST00000483281 PNPLA6Q8IY17 1366 aa28.03■■■□□ 2.08
RXRB-204ENST00000483281 MIER1Q8N108 512 aa28.02■■■□□ 2.08
RXRB-204ENST00000483281 FBXO41Q8TF61 875 aa28.02■■■□□ 2.08
RXRB-204ENST00000483281 HSPA1LP34931 641 aa28.01■■■□□ 2.07
RXRB-204ENST00000483281 TNNT2P45379 298 aaPredicted RBP28.01■■■□□ 2.07
RXRB-204ENST00000483281 PHRF1Q9P1Y6 1649 aaKnown RBP28.01■■■□□ 2.07
RXRB-204ENST00000483281 SHPRHQ149N8 1683 aa28.01■■■□□ 2.07
RXRB-204ENST00000483281 NFAT5O94916 1531 aa28■■■□□ 2.07
RXRB-204ENST00000483281 POLKQ9UBT6 870 aa27.99■■■□□ 2.07
RXRB-204ENST00000483281 JCADQ9P266 1359 aa27.99■■■□□ 2.07
RXRB-204ENST00000483281 CABLES1Q8TDN4 633 aa27.97■■■□□ 2.07
RXRB-204ENST00000483281 ABCA3Q99758 1704 aa27.97■■■□□ 2.07
RXRB-204ENST00000483281 CCER2I3L3R5 266 aa27.97■■■□□ 2.07
RXRB-204ENST00000483281 FBLN1P23142 703 aa27.97■■■□□ 2.07
RXRB-204ENST00000483281 KIF24Q5T7B8 1368 aa27.96■■■□□ 2.07
RXRB-204ENST00000483281 SMG6Q86US8 1419 aaKnown RBP27.96■■■□□ 2.07
RXRB-204ENST00000483281 MTHFSP49914 203 aa27.95■■■□□ 2.07
RXRB-204ENST00000483281 ARHGEF25Q86VW2 580 aa27.95■■■□□ 2.06
RXRB-204ENST00000483281 CPDO75976 1380 aa27.93■■■□□ 2.06
RXRB-204ENST00000483281 RRS1Q15050 365 aaKnown RBP27.93■■■□□ 2.06
RXRB-204ENST00000483281 INSRP06213 1382 aa27.93■■■□□ 2.06
RXRB-204ENST00000483281 MAP3K19Q56UN5 1328 aa27.92■■■□□ 2.06
RXRB-204ENST00000483281 SOX12O15370 315 aa27.92■■■□□ 2.06
RXRB-204ENST00000483281 LTN1O94822 1766 aa27.92■■■□□ 2.06
RXRB-204ENST00000483281 EMILIN1Q9Y6C2 1016 aa27.91■■■□□ 2.06
RXRB-204ENST00000483281 SPATA31A6Q5VVP1 1343 aa27.9■■■□□ 2.06
RXRB-204ENST00000483281 HAP1P54257 671 aaPredicted RBP27.9■■■□□ 2.06
RXRB-204ENST00000483281 PLEKHG5O94827 1062 aa27.89■■■□□ 2.06
RXRB-204ENST00000483281 RTL1A6NKG5 1358 aa27.88■■■□□ 2.05
RXRB-204ENST00000483281 ZC3H6P61129 1189 aaKnown RBP27.88■■■□□ 2.05
RXRB-204ENST00000483281 IP6K1Q92551 441 aa27.88■■■□□ 2.05
RXRB-204ENST00000483281 AMPHP49418 695 aa27.87■■■□□ 2.05
RXRB-204ENST00000483281 CDK12Q9NYV4 1490 aaPredicted RBP27.87■■■□□ 2.05
RXRB-204ENST00000483281 PEAK1Q9H792 1746 aa27.87■■■□□ 2.05
RXRB-204ENST00000483281 CFAP53Q96M91 514 aa27.86■■■□□ 2.05
RXRB-204ENST00000483281 ABCC6O95255 1503 aa27.86■■■□□ 2.05
RXRB-204ENST00000483281 FLT4P35916 1363 aa27.86■■■□□ 2.05
RXRB-204ENST00000483281 COL18A1P39060 1754 aa27.85■■■□□ 2.05
RXRB-204ENST00000483281 KIAA0232Q92628 1395 aa27.85■■■□□ 2.05
RXRB-204ENST00000483281 PPM1GO15355 546 aaPredicted RBP27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms