RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 TESK2Q96S53 571 aa12.32□□□□□ -0.44
SNX4-205ENST00000482965 CABP1Q9NZU7 370 aa12.32□□□□□ -0.44
SNX4-205ENST00000482965 ALS2Q96Q42 1657 aa12.32□□□□□ -0.44
SNX4-205ENST00000482965 AKAP12Q02952 1782 aa12.3□□□□□ -0.44
SNX4-205ENST00000482965 PLEKHG5O94827 1062 aa12.3□□□□□ -0.44
SNX4-205ENST00000482965 ADAMTS2O95450 1211 aa12.3□□□□□ -0.44
SNX4-205ENST00000482965 TMF1P82094 1093 aa12.3□□□□□ -0.44
SNX4-205ENST00000482965 MARF1Q9Y4F3 1742 aaKnown RBP12.3□□□□□ -0.44
SNX4-205ENST00000482965 ABCA3Q99758 1704 aa12.29□□□□□ -0.44
SNX4-205ENST00000482965 HAP1P54257 671 aaPredicted RBP12.29□□□□□ -0.44
SNX4-205ENST00000482965 TMC1Q8TDI8 760 aa12.29□□□□□ -0.44
SNX4-205ENST00000482965 PUS7Q96PZ0 661 aaKnown RBP12.29□□□□□ -0.44
SNX4-205ENST00000482965 EIF4G2P78344 907 aaKnown RBP eCLIP12.28□□□□□ -0.44
SNX4-205ENST00000482965 C8orf37Q96NL8 207 aa12.28□□□□□ -0.44
SNX4-205ENST00000482965 USP6P35125 1406 aa12.28□□□□□ -0.44
SNX4-205ENST00000482965 DCAF8L1A6NGE4 600 aa12.27□□□□□ -0.45
SNX4-205ENST00000482965 CABLES1Q8TDN4 633 aa12.27□□□□□ -0.45
SNX4-205ENST00000482965 BRD4O60885 1362 aaPredicted RBP12.27□□□□□ -0.45
SNX4-205ENST00000482965 MON2Q7Z3U7 1717 aa12.26□□□□□ -0.45
SNX4-205ENST00000482965 HSPA5P11021 654 aaKnown RBP12.26□□□□□ -0.45
SNX4-205ENST00000482965 CDCA8Q53HL2 280 aa12.26□□□□□ -0.45
SNX4-205ENST00000482965 NGLY1Q96IV0 654 aa12.26□□□□□ -0.45
SNX4-205ENST00000482965 ZNF692Q9BU19 519 aaPredicted RBP12.26□□□□□ -0.45
SNX4-205ENST00000482965 RGS17Q9UGC6 210 aaPredicted RBP12.26□□□□□ -0.45
SNX4-205ENST00000482965 AFF2P51816 1311 aa12.26□□□□□ -0.45
SNX4-205ENST00000482965 CRYBG1Q9Y4K1 1723 aa12.25□□□□□ -0.45
SNX4-205ENST00000482965 NUTM2GQ5VZR2 741 aa12.25□□□□□ -0.45
SNX4-205ENST00000482965 ZNF772Q68DY9 489 aaPredicted RBP12.25□□□□□ -0.45
SNX4-205ENST00000482965 HDGFL2Q7Z4V5 671 aaPredicted RBP12.25□□□□□ -0.45
SNX4-205ENST00000482965 ABTB2Q8N961 1025 aa12.25□□□□□ -0.45
SNX4-205ENST00000482965 SLC12A5Q9H2X9 1139 aa12.25□□□□□ -0.45
SNX4-205ENST00000482965 KTN1Q86UP2 1357 aaKnown RBP12.25□□□□□ -0.45
SNX4-205ENST00000482965 NINLQ9Y2I6 1382 aa12.25□□□□□ -0.45
SNX4-205ENST00000482965 CPSF1Q10570 1443 aaKnown RBP12.25□□□□□ -0.45
SNX4-205ENST00000482965 TERF2IPQ9NYB0 399 aa12.24□□□□□ -0.45
SNX4-205ENST00000482965 PHRF1Q9P1Y6 1649 aaKnown RBP12.24□□□□□ -0.45
SNX4-205ENST00000482965 NRKQ7Z2Y5 1582 aa12.23□□□□□ -0.45
SNX4-205ENST00000482965 CD163L1Q9NR16 1453 aa12.23□□□□□ -0.45
SNX4-205ENST00000482965 SSH2Q76I76 1423 aa12.23□□□□□ -0.45
SNX4-205ENST00000482965 TTC21BQ7Z4L5 1316 aa12.23□□□□□ -0.45
SNX4-205ENST00000482965 PIK3C2AO00443 1686 aa12.22□□□□□ -0.45
SNX4-205ENST00000482965 A0A1W2PP64 1363 aa12.22□□□□□ -0.45
SNX4-205ENST00000482965 TTC21AQ8NDW8 1320 aa12.22□□□□□ -0.45
SNX4-205ENST00000482965 POTEAQ6S8J7 498 aa12.22□□□□□ -0.45
SNX4-205ENST00000482965 ILDR2Q71H61 639 aa12.22□□□□□ -0.45
SNX4-205ENST00000482965 NLRP13Q86W25 1043 aa12.22□□□□□ -0.45
SNX4-205ENST00000482965 NLRP6P59044 892 aa12.21□□□□□ -0.45
SNX4-205ENST00000482965 POLR3GLQ9BT43 218 aa12.21□□□□□ -0.45
SNX4-205ENST00000482965 USP21Q9UK80 565 aa12.21□□□□□ -0.45
SNX4-205ENST00000482965 PLCH1Q4KWH8 1693 aa12.21□□□□□ -0.45
SNX4-205ENST00000482965 EDC4Q6P2E9 1401 aaKnown RBP12.2□□□□□ -0.46
SNX4-205ENST00000482965 MYOM1P52179 1685 aa12.2□□□□□ -0.46
SNX4-205ENST00000482965 USP19O94966 1318 aa12.2□□□□□ -0.46
SNX4-205ENST00000482965 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.2□□□□□ -0.46
SNX4-205ENST00000482965 FNBP4Q8N3X1 1017 aaPredicted RBP12.2□□□□□ -0.46
SNX4-205ENST00000482965 COL14A1Q05707 1796 aaKnown RBP12.2□□□□□ -0.46
SNX4-205ENST00000482965 NWD2Q9ULI1 1742 aa12.2□□□□□ -0.46
SNX4-205ENST00000482965 ANKRD36BQ8N2N9 1353 aa12.19□□□□□ -0.46
SNX4-205ENST00000482965 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.19□□□□□ -0.46
SNX4-205ENST00000482965 SLIT2O94813 1529 aa12.18□□□□□ -0.46
SNX4-205ENST00000482965 ZC3H6P61129 1189 aaKnown RBP12.18□□□□□ -0.46
SNX4-205ENST00000482965 QTRT2Q9H974 415 aaKnown RBP12.18□□□□□ -0.46
SNX4-205ENST00000482965 PRDM11Q9NQV5 511 aa12.18□□□□□ -0.46
SNX4-205ENST00000482965 KIAA0232Q92628 1395 aa12.18□□□□□ -0.46
SNX4-205ENST00000482965 SLIT3O75094 1523 aa12.17□□□□□ -0.46
SNX4-205ENST00000482965 BCL9LQ86UU0 1499 aa12.17□□□□□ -0.46
SNX4-205ENST00000482965 FAM83GA6ND36 823 aa12.17□□□□□ -0.46
SNX4-205ENST00000482965 GCP02774 474 aa12.17□□□□□ -0.46
SNX4-205ENST00000482965 NME9Q86XW9 330 aa12.17□□□□□ -0.46
SNX4-205ENST00000482965 TRPC5Q9UL62 973 aaPredicted RBP12.17□□□□□ -0.46
SNX4-205ENST00000482965 USP54Q70EL1 1684 aa12.16□□□□□ -0.46
SNX4-205ENST00000482965 RXRBP28702 533 aa12.16□□□□□ -0.46
SNX4-205ENST00000482965 UNC5CLQ8IV45 518 aa12.16□□□□□ -0.46
SNX4-205ENST00000482965 ATRNO75882 1429 aa12.16□□□□□ -0.46
SNX4-205ENST00000482965 NRAPQ86VF7 1730 aa12.15□□□□□ -0.46
SNX4-205ENST00000482965 ZBTB7CA1YPR0 619 aa12.15□□□□□ -0.46
SNX4-205ENST00000482965 SOX12O15370 315 aa12.15□□□□□ -0.46
SNX4-205ENST00000482965 RBM6P78332 1123 aaKnown RBP12.15□□□□□ -0.46
SNX4-205ENST00000482965 CHRNA2Q15822 529 aa12.15□□□□□ -0.46
SNX4-205ENST00000482965 BTG4Q9NY30 223 aa12.15□□□□□ -0.46
SNX4-205ENST00000482965 ZRANB1Q9UGI0 708 aa12.15□□□□□ -0.46
SNX4-205ENST00000482965 CPDO75976 1380 aa12.15□□□□□ -0.46
SNX4-205ENST00000482965 USP31Q70CQ4 1352 aa12.15□□□□□ -0.46
SNX4-205ENST00000482965 KIF20BQ96Q89 1820 aa12.14□□□□□ -0.47
SNX4-205ENST00000482965 KCNH5Q8NCM2 988 aa12.14□□□□□ -0.47
SNX4-205ENST00000482965 C11orf95C9JLR9 678 aaPredicted RBP12.13□□□□□ -0.47
SNX4-205ENST00000482965 CCDC9Q9Y3X0 531 aaKnown RBP12.13□□□□□ -0.47
SNX4-205ENST00000482965 OVOS2A0A0J9YW53 1432 aa12.12□□□□□ -0.47
SNX4-205ENST00000482965 OVOS2Q6IE36 1432 aa12.12□□□□□ -0.47
SNX4-205ENST00000482965 NSD3Q9BZ95 1437 aa12.12□□□□□ -0.47
SNX4-205ENST00000482965 VPS72Q15906 364 aa12.12□□□□□ -0.47
SNX4-205ENST00000482965 COG3Q96JB2 828 aa12.12□□□□□ -0.47
SNX4-205ENST00000482965 LMO7Q8WWI1 1683 aa12.12□□□□□ -0.47
SNX4-205ENST00000482965 KIF7Q2M1P5 1343 aa12.11□□□□□ -0.47
SNX4-205ENST00000482965 NFAT5O94916 1531 aa12.11□□□□□ -0.47
SNX4-205ENST00000482965 LTN1O94822 1766 aa12.11□□□□□ -0.47
SNX4-205ENST00000482965 CDK12Q9NYV4 1490 aaPredicted RBP12.11□□□□□ -0.47
SNX4-205ENST00000482965 GJD4Q96KN9 370 aaPredicted RBP12.11□□□□□ -0.47
SNX4-205ENST00000482965 CARD14Q9BXL6 1004 aa12.11□□□□□ -0.47
SNX4-205ENST00000482965 STRN4Q9NRL3 753 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms