RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 PXDNQ92626 1479 aa18.6■□□□□ 0.57
COL21A1-209ENST00000482933 PLEKHG5O94827 1062 aa18.59■□□□□ 0.57
COL21A1-209ENST00000482933 NGLY1Q96IV0 654 aa18.59■□□□□ 0.57
COL21A1-209ENST00000482933 COL22A1Q8NFW1 1626 aaPredicted RBP18.59■□□□□ 0.57
COL21A1-209ENST00000482933 XPCQ01831 940 aaPredicted RBP18.58■□□□□ 0.57
COL21A1-209ENST00000482933 PHF8Q9UPP1 1060 aa18.57■□□□□ 0.56
COL21A1-209ENST00000482933 PSME1Q06323 249 aa18.56■□□□□ 0.56
COL21A1-209ENST00000482933 QTRT2Q9H974 415 aaKnown RBP18.56■□□□□ 0.56
COL21A1-209ENST00000482933 ADGRB2O60241 1585 aa18.55■□□□□ 0.56
COL21A1-209ENST00000482933 ANKARQ7Z5J8 1434 aa18.55■□□□□ 0.56
COL21A1-209ENST00000482933 RGPD8O14715 1765 aaPredicted RBP18.55■□□□□ 0.56
COL21A1-209ENST00000482933 KRT28Q7Z3Y7 464 aa18.55■□□□□ 0.56
COL21A1-209ENST00000482933 CDK12Q9NYV4 1490 aaPredicted RBP18.55■□□□□ 0.56
COL21A1-209ENST00000482933 EIF3AQ14152 1382 aaKnown RBP18.54■□□□□ 0.56
COL21A1-209ENST00000482933 RBM6P78332 1123 aaKnown RBP18.54■□□□□ 0.56
COL21A1-209ENST00000482933 SPATA31A3Q5VYP0 1347 aa18.54■□□□□ 0.56
COL21A1-209ENST00000482933 USP21Q9UK80 565 aa18.53■□□□□ 0.56
COL21A1-209ENST00000482933 FNBP4Q8N3X1 1017 aaPredicted RBP18.52■□□□□ 0.56
COL21A1-209ENST00000482933 HIRIP3Q9BW71 556 aaPredicted RBP18.52■□□□□ 0.56
COL21A1-209ENST00000482933 MINK1Q8N4C8 1332 aaPredicted RBP18.52■□□□□ 0.56
COL21A1-209ENST00000482933 WASLO00401 505 aaPredicted RBP18.5■□□□□ 0.55
COL21A1-209ENST00000482933 TRPC5Q9UL62 973 aaPredicted RBP18.5■□□□□ 0.55
COL21A1-209ENST00000482933 KIAA1210Q9ULL0 1709 aa18.5■□□□□ 0.55
COL21A1-209ENST00000482933 PMFBP1Q8TBY8 1022 aa18.49■□□□□ 0.55
COL21A1-209ENST00000482933 SBNO1A3KN83 1393 aa18.49■□□□□ 0.55
COL21A1-209ENST00000482933 TNS3Q68CZ2 1445 aa18.49■□□□□ 0.55
COL21A1-209ENST00000482933 MARF1Q9Y4F3 1742 aaKnown RBP18.49■□□□□ 0.55
COL21A1-209ENST00000482933 USP32Q8NFA0 1604 aa18.48■□□□□ 0.55
COL21A1-209ENST00000482933 ARHGEF28Q8N1W1 1705 aaKnown RBP18.48■□□□□ 0.55
COL21A1-209ENST00000482933 TULP4Q9NRJ4 1543 aa18.48■□□□□ 0.55
COL21A1-209ENST00000482933 MIER1Q8N108 512 aa18.47■□□□□ 0.55
COL21A1-209ENST00000482933 ARHGEF10O15013 1369 aa18.46■□□□□ 0.55
COL21A1-209ENST00000482933 HAP1P54257 671 aaPredicted RBP18.46■□□□□ 0.55
COL21A1-209ENST00000482933 GPRASP1Q5JY77 1395 aa18.45■□□□□ 0.54
COL21A1-209ENST00000482933 LMOD2Q6P5Q4 547 aa18.45■□□□□ 0.54
COL21A1-209ENST00000482933 RGS12O14924 1447 aa18.44■□□□□ 0.54
COL21A1-209ENST00000482933 PRR36Q9H6K5 1346 aa18.44■□□□□ 0.54
COL21A1-209ENST00000482933 UPF1Q92900 1129 aaKnown RBP eCLIP18.44■□□□□ 0.54
COL21A1-209ENST00000482933 ATRNO75882 1429 aa18.44■□□□□ 0.54
COL21A1-209ENST00000482933 BCL9LQ86UU0 1499 aa18.42■□□□□ 0.54
COL21A1-209ENST00000482933 NBPF1Q3BBV0 1214 aa18.42■□□□□ 0.54
COL21A1-209ENST00000482933 NGDNQ8NEJ9 315 aaKnown RBP18.42■□□□□ 0.54
COL21A1-209ENST00000482933 L3MBTL2Q969R5 705 aa18.41■□□□□ 0.54
COL21A1-209ENST00000482933 ITSN1Q15811 1721 aa18.4■□□□□ 0.54
COL21A1-209ENST00000482933 UNC5CLQ8IV45 518 aa18.4■□□□□ 0.54
COL21A1-209ENST00000482933 NUDT16Q96DE0 195 aaKnown RBP18.4■□□□□ 0.54
COL21A1-209ENST00000482933 SIN3AQ96ST3 1273 aa18.4■□□□□ 0.54
COL21A1-209ENST00000482933 PLCD3Q8N3E9 789 aa18.4■□□□□ 0.54
COL21A1-209ENST00000482933 CABLES1Q8TDN4 633 aa18.4■□□□□ 0.54
COL21A1-209ENST00000482933 CDK19Q9BWU1 502 aa18.4■□□□□ 0.54
COL21A1-209ENST00000482933 SLIT2O94813 1529 aa18.39■□□□□ 0.54
COL21A1-209ENST00000482933 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.39■□□□□ 0.53
COL21A1-209ENST00000482933 NEUROD1Q13562 356 aa18.39■□□□□ 0.53
COL21A1-209ENST00000482933 GJD4Q96KN9 370 aaPredicted RBP18.39■□□□□ 0.53
COL21A1-209ENST00000482933 TRPM3Q9HCF6 1732 aaPredicted RBP18.38■□□□□ 0.53
COL21A1-209ENST00000482933 ATP7BP35670 1465 aa18.38■□□□□ 0.53
COL21A1-209ENST00000482933 ZBTB47Q9UFB7 747 aaPredicted RBP18.37■□□□□ 0.53
COL21A1-209ENST00000482933 CCDC61Q9Y6R9 512 aa18.37■□□□□ 0.53
COL21A1-209ENST00000482933 CENPJQ9HC77 1338 aaPredicted RBP18.36■□□□□ 0.53
COL21A1-209ENST00000482933 DCBLD2Q96PD2 775 aa18.36■□□□□ 0.53
COL21A1-209ENST00000482933 ABCA3Q99758 1704 aa18.36■□□□□ 0.53
COL21A1-209ENST00000482933 ALS2Q96Q42 1657 aa18.35■□□□□ 0.53
COL21A1-209ENST00000482933 ATAD2Q6PL18 1390 aa18.35■□□□□ 0.53
COL21A1-209ENST00000482933 PHF12Q96QT6 1004 aa18.34■□□□□ 0.53
COL21A1-209ENST00000482933 FBXO3Q9UK99 471 aa18.33■□□□□ 0.53
COL21A1-209ENST00000482933 NWD2Q9ULI1 1742 aa18.33■□□□□ 0.52
COL21A1-209ENST00000482933 PLEKHG3A1L390 1219 aa18.32■□□□□ 0.52
COL21A1-209ENST00000482933 SRPK2P78362 688 aaKnown RBP18.32■□□□□ 0.52
COL21A1-209ENST00000482933 POLR3AO14802 1390 aaPredicted RBP18.32■□□□□ 0.52
COL21A1-209ENST00000482933 FAM83GA6ND36 823 aa18.32■□□□□ 0.52
COL21A1-209ENST00000482933 VPS72Q15906 364 aa18.32■□□□□ 0.52
COL21A1-209ENST00000482933 RALGAPBQ86X10 1494 aa18.31■□□□□ 0.52
COL21A1-209ENST00000482933 TOPAZ1Q8N9V7 1692 aa18.31■□□□□ 0.52
COL21A1-209ENST00000482933 TRPM1Q7Z4N2 1603 aa18.31■□□□□ 0.52
COL21A1-209ENST00000482933 PLCH1Q4KWH8 1693 aa18.31■□□□□ 0.52
COL21A1-209ENST00000482933 NBPF8Q3BBV2 869 aa18.31■□□□□ 0.52
COL21A1-209ENST00000482933 ACEP12821 1306 aa18.3■□□□□ 0.52
COL21A1-209ENST00000482933 ROCK2O75116 1388 aaKnown RBP18.3■□□□□ 0.52
COL21A1-209ENST00000482933 POTEIP0CG38 1075 aa18.3■□□□□ 0.52
COL21A1-209ENST00000482933 QRICH2Q9H0J4 1663 aa18.29■□□□□ 0.52
COL21A1-209ENST00000482933 GLI3P10071 1580 aa18.29■□□□□ 0.52
COL21A1-209ENST00000482933 GALR2O43603 387 aaPredicted RBP18.29■□□□□ 0.52
COL21A1-209ENST00000482933 TRIM26Q12899 539 aaPredicted RBP18.29■□□□□ 0.52
COL21A1-209ENST00000482933 CCDC9Q9Y3X0 531 aaKnown RBP18.29■□□□□ 0.52
COL21A1-209ENST00000482933 CABP2Q9NPB3 220 aa18.28■□□□□ 0.52
COL21A1-209ENST00000482933 COL14A1Q05707 1796 aaKnown RBP18.27■□□□□ 0.52
COL21A1-209ENST00000482933 TSPYL2Q9H2G4 693 aaPredicted RBP18.27■□□□□ 0.52
COL21A1-209ENST00000482933 BTG4Q9NY30 223 aa18.27■□□□□ 0.52
COL21A1-209ENST00000482933 PPIP5K1Q6PFW1 1433 aa18.27■□□□□ 0.52
COL21A1-209ENST00000482933 EVC2Q86UK5 1308 aa18.25■□□□□ 0.51
COL21A1-209ENST00000482933 CRYBG1Q9Y4K1 1723 aa18.25■□□□□ 0.51
COL21A1-209ENST00000482933 BRD4O60885 1362 aaPredicted RBP18.24■□□□□ 0.51
COL21A1-209ENST00000482933 ONECUT3O60422 494 aaPredicted RBP18.24■□□□□ 0.51
COL21A1-209ENST00000482933 CCDC125Q86Z20 511 aa18.24■□□□□ 0.51
COL21A1-209ENST00000482933 SEPT12Q8IYM1 358 aa18.24■□□□□ 0.51
COL21A1-209ENST00000482933 PRDM11Q9NQV5 511 aa18.24■□□□□ 0.51
COL21A1-209ENST00000482933 TONSLQ96HA7 1378 aa18.24■□□□□ 0.51
COL21A1-209ENST00000482933 ABTB2Q8N961 1025 aa18.23■□□□□ 0.51
COL21A1-209ENST00000482933 NRAPQ86VF7 1730 aa18.23■□□□□ 0.51
COL21A1-209ENST00000482933 NUTM2GQ5VZR2 741 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms