RNA–Protein interactions for RNA: ENST00000482871.5

MSL3-215, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-215ENST00000482871 NBPF26B4DH59 902 aa11.71□□□□□ -0.53
MSL3-215ENST00000482871 SMAPO00193 183 aa11.71□□□□□ -0.53
MSL3-215ENST00000482871 MRPL50Q8N5N7 158 aaKnown RBP11.71□□□□□ -0.53
MSL3-215ENST00000482871 PLEKHH2Q8IVE3 1493 aa11.7□□□□□ -0.54
MSL3-215ENST00000482871 RICTORQ6R327 1708 aa11.7□□□□□ -0.54
MSL3-215ENST00000482871 HNRNPMP52272 730 aaKnown RBP eCLIP11.7□□□□□ -0.54
MSL3-215ENST00000482871 FAM161AQ3B820 660 aa11.7□□□□□ -0.54
MSL3-215ENST00000482871 NUDT18Q6ZVK8 323 aa11.7□□□□□ -0.54
MSL3-215ENST00000482871 SPNS2Q8IVW8 549 aa11.7□□□□□ -0.54
MSL3-215ENST00000482871 TATDN2Q93075 761 aa11.7□□□□□ -0.54
MSL3-215ENST00000482871 MYT1LQ9UL68 1186 aa11.7□□□□□ -0.54
MSL3-215ENST00000482871 ABCC1P33527 1531 aa11.7□□□□□ -0.54
MSL3-215ENST00000482871 MIA2Q96PC5 1412 aa11.69□□□□□ -0.54
MSL3-215ENST00000482871 GOLGA8CPA6NN73 597 aa11.69□□□□□ -0.54
MSL3-215ENST00000482871 BHMG1C9JSJ3 638 aaPredicted RBP11.69□□□□□ -0.54
MSL3-215ENST00000482871 MMRN1Q13201 1228 aa11.69□□□□□ -0.54
MSL3-215ENST00000482871 TTC13Q8NBP0 860 aa11.69□□□□□ -0.54
MSL3-215ENST00000482871 CCER1Q8TC90 406 aaPredicted RBP11.69□□□□□ -0.54
MSL3-215ENST00000482871 KIAA1107Q9UPP5 1409 aa11.69□□□□□ -0.54
MSL3-215ENST00000482871 TRAK2O60296 914 aa11.68□□□□□ -0.54
MSL3-215ENST00000482871 AFAP1Q8N556 730 aa11.68□□□□□ -0.54
MSL3-215ENST00000482871 SYCP2Q9BX26 1530 aa11.68□□□□□ -0.54
MSL3-215ENST00000482871 CAMSAP2Q08AD1 1489 aa11.68□□□□□ -0.54
MSL3-215ENST00000482871 POGZQ7Z3K3 1410 aa11.68□□□□□ -0.54
MSL3-215ENST00000482871 PTPN23Q9H3S7 1636 aa11.68□□□□□ -0.54
MSL3-215ENST00000482871 ARHGEF12Q9NZN5 1544 aa11.67□□□□□ -0.54
MSL3-215ENST00000482871 C3orf80F5H4A9 247 aa11.67□□□□□ -0.54
MSL3-215ENST00000482871 CCDC82Q8N4S0 544 aa11.67□□□□□ -0.54
MSL3-215ENST00000482871 CCDC9Q9Y3X0 531 aaKnown RBP11.67□□□□□ -0.54
MSL3-215ENST00000482871 ZNF518AQ6AHZ1 1483 aa11.67□□□□□ -0.54
MSL3-215ENST00000482871 FGD6Q6ZV73 1430 aa11.67□□□□□ -0.54
MSL3-215ENST00000482871 FAM50AQ14320 339 aaKnown RBP11.66□□□□□ -0.54
MSL3-215ENST00000482871 RSPH4AQ5TD94 716 aa11.66□□□□□ -0.54
MSL3-215ENST00000482871 TRAPPC8Q9Y2L5 1435 aa11.66□□□□□ -0.54
MSL3-215ENST00000482871 FRMPD1Q5SYB0 1578 aa11.66□□□□□ -0.54
MSL3-215ENST00000482871 CLUAP1Q96AJ1 413 aa11.65□□□□□ -0.54
MSL3-215ENST00000482871 ADGRG1Q9Y653 693 aa11.65□□□□□ -0.54
MSL3-215ENST00000482871 TSPY4P0CV99 314 aa11.64□□□□□ -0.55
MSL3-215ENST00000482871 TSPY10P0CW01 314 aa11.64□□□□□ -0.55
MSL3-215ENST00000482871 RBM46Q8TBY0 533 aaKnown RBP11.64□□□□□ -0.55
MSL3-215ENST00000482871 SPAG9O60271 1321 aaKnown RBP11.63□□□□□ -0.55
MSL3-215ENST00000482871 FAM98CQ17RN3 349 aaKnown RBP11.63□□□□□ -0.55
MSL3-215ENST00000482871 LAPTM4BQ86VI4 370 aa11.63□□□□□ -0.55
MSL3-215ENST00000482871 PCMTD1Q96MG8 357 aaPredicted RBP11.63□□□□□ -0.55
MSL3-215ENST00000482871 ZMYM4Q5VZL5 1548 aa11.63□□□□□ -0.55
MSL3-215ENST00000482871 MBD5Q9P267 1494 aa11.63□□□□□ -0.55
MSL3-215ENST00000482871 KDM5CP41229 1560 aa11.62□□□□□ -0.55
MSL3-215ENST00000482871 TTLL12Q14166 644 aaPredicted RBP11.62□□□□□ -0.55
MSL3-215ENST00000482871 TCOF1Q13428 1488 aaKnown RBP11.62□□□□□ -0.55
MSL3-215ENST00000482871 CCDC141Q6ZP82 1450 aa11.62□□□□□ -0.55
MSL3-215ENST00000482871 MAGI2Q86UL8 1455 aa11.62□□□□□ -0.55
MSL3-215ENST00000482871 ARHGEF5Q12774 1597 aa11.62□□□□□ -0.55
MSL3-215ENST00000482871 HECW2Q9P2P5 1572 aa11.62□□□□□ -0.55
MSL3-215ENST00000482871 ZFYVE16Q7Z3T8 1539 aa11.61□□□□□ -0.55
MSL3-215ENST00000482871 OATP04181 439 aa11.61□□□□□ -0.55
MSL3-215ENST00000482871 NECTIN2Q92692 538 aa11.61□□□□□ -0.55
MSL3-215ENST00000482871 KIDINS220Q9ULH0 1771 aa11.6□□□□□ -0.55
MSL3-215ENST00000482871 MLH3Q9UHC1 1453 aa11.6□□□□□ -0.55
MSL3-215ENST00000482871 WNT2BQ93097 391 aa11.6□□□□□ -0.55
MSL3-215ENST00000482871 KCTD12Q96CX2 325 aaKnown RBP11.6□□□□□ -0.55
MSL3-215ENST00000482871 ZFRQ96KR1 1074 aaKnown RBP11.6□□□□□ -0.55
MSL3-215ENST00000482871 RNF166Q96A37 237 aaPredicted RBP11.59□□□□□ -0.55
MSL3-215ENST00000482871 EYA1Q99502 592 aa11.59□□□□□ -0.55
MSL3-215ENST00000482871 YEATS2Q9ULM3 1422 aa11.59□□□□□ -0.55
MSL3-215ENST00000482871 DNMT1P26358 1616 aaKnown RBP11.58□□□□□ -0.56
MSL3-215ENST00000482871 ITGAEP38570 1179 aa11.58□□□□□ -0.56
MSL3-215ENST00000482871 METTL3Q86U44 580 aaKnown RBP11.58□□□□□ -0.56
MSL3-215ENST00000482871 ANKK1Q8NFD2 765 aa11.58□□□□□ -0.56
MSL3-215ENST00000482871 ATP7AQ04656 1500 aa11.58□□□□□ -0.56
MSL3-215ENST00000482871 ARHGEF40Q8TER5 1519 aa11.58□□□□□ -0.56
MSL3-215ENST00000482871 ARID4BQ4LE39 1312 aaPredicted RBP11.58□□□□□ -0.56
MSL3-215ENST00000482871 ATP10AO60312 1499 aa11.57□□□□□ -0.56
MSL3-215ENST00000482871 CROCC2H7BZ55 1655 aa11.57□□□□□ -0.56
MSL3-215ENST00000482871 HDGFP51858 240 aaKnown RBP11.57□□□□□ -0.56
MSL3-215ENST00000482871 MCM6Q14566 821 aa11.57□□□□□ -0.56
MSL3-215ENST00000482871 GIGYF2Q6Y7W6 1299 aaKnown RBP11.57□□□□□ -0.56
MSL3-215ENST00000482871 PXYLP1Q8TE99 480 aa11.57□□□□□ -0.56
MSL3-215ENST00000482871 RTEL1-TNFRSF6BF6WH68 1400 aa11.57□□□□□ -0.56
MSL3-215ENST00000482871 ABCC5O15440 1437 aa11.57□□□□□ -0.56
MSL3-215ENST00000482871 DAPK1P53355 1430 aa11.57□□□□□ -0.56
MSL3-215ENST00000482871 RRBP1Q9P2E9 1410 aaKnown RBP11.57□□□□□ -0.56
MSL3-215ENST00000482871 INO80Q9ULG1 1556 aaPredicted RBP11.57□□□□□ -0.56
MSL3-215ENST00000482871 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.56□□□□□ -0.56
MSL3-215ENST00000482871 RCCD1A6NED2 376 aa11.56□□□□□ -0.56
MSL3-215ENST00000482871 MS4A1P11836 297 aa11.56□□□□□ -0.56
MSL3-215ENST00000482871 DNAJB2P25686 324 aa11.56□□□□□ -0.56
MSL3-215ENST00000482871 C9orf84Q5VXU9 1444 aa11.56□□□□□ -0.56
MSL3-215ENST00000482871 CHIC2Q9UKJ5 165 aa11.56□□□□□ -0.56
MSL3-215ENST00000482871 ABCA6Q8N139 1617 aa11.56□□□□□ -0.56
MSL3-215ENST00000482871 ADGBQ8N7X0 1667 aa11.55□□□□□ -0.56
MSL3-215ENST00000482871 DIP2CQ9Y2E4 1556 aa11.55□□□□□ -0.56
MSL3-215ENST00000482871 SAMD7Q7Z3H4 446 aa11.55□□□□□ -0.56
MSL3-215ENST00000482871 MAST1Q9Y2H9 1570 aa11.54□□□□□ -0.56
MSL3-215ENST00000482871 RNF40O75150 1001 aa11.54□□□□□ -0.56
MSL3-215ENST00000482871 NLRP7Q8WX94 980 aa11.54□□□□□ -0.56
MSL3-215ENST00000482871 LRCH3Q96II8 777 aa11.54□□□□□ -0.56
MSL3-215ENST00000482871 SHANK2Q9UPX8 1470 aa11.54□□□□□ -0.56
MSL3-215ENST00000482871 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.53□□□□□ -0.56
MSL3-215ENST00000482871 BCAMP50895 628 aa11.53□□□□□ -0.56
MSL3-215ENST00000482871 SH3D19Q5HYK7 790 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms