RNA–Protein interactions for RNA: ENST00000482843.5

RAPGEF3-210, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,395 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-210ENST00000482843 PRKAR2BP31323 418 aa15.33■□□□□ 0.04
RAPGEF3-210ENST00000482843 SLC26A8Q96RN1 970 aa15.33■□□□□ 0.04
RAPGEF3-210ENST00000482843 RRS1Q15050 365 aaKnown RBP15.33■□□□□ 0.04
RAPGEF3-210ENST00000482843 SBNO2Q9Y2G9 1366 aa15.33■□□□□ 0.04
RAPGEF3-210ENST00000482843 RLBP1P12271 317 aa15.32■□□□□ 0.04
RAPGEF3-210ENST00000482843 TMPOP42166 694 aaKnown RBP15.32■□□□□ 0.04
RAPGEF3-210ENST00000482843 NME9Q86XW9 330 aa15.32■□□□□ 0.04
RAPGEF3-210ENST00000482843 FAM161AQ3B820 660 aa15.32■□□□□ 0.04
RAPGEF3-210ENST00000482843 NGEFQ8N5V2 710 aa15.32■□□□□ 0.04
RAPGEF3-210ENST00000482843 MROH2AA6NES4 1674 aa15.32■□□□□ 0.04
RAPGEF3-210ENST00000482843 FRMPD1Q5SYB0 1578 aa15.32■□□□□ 0.04
RAPGEF3-210ENST00000482843 CNKSR2Q8WXI2 1034 aa15.32■□□□□ 0.04
RAPGEF3-210ENST00000482843 EMILIN1Q9Y6C2 1016 aa15.32■□□□□ 0.04
RAPGEF3-210ENST00000482843 ADGRB3O60242 1522 aa15.31■□□□□ 0.04
RAPGEF3-210ENST00000482843 TRHP20396 242 aaPredicted RBP15.3■□□□□ 0.04
RAPGEF3-210ENST00000482843 WDR63Q8IWG1 891 aa15.3■□□□□ 0.04
RAPGEF3-210ENST00000482843 ATAD2Q6PL18 1390 aa15.3■□□□□ 0.04
RAPGEF3-210ENST00000482843 PDE3AQ14432 1141 aa15.3■□□□□ 0.04
RAPGEF3-210ENST00000482843 ZKSCAN2Q63HK3 967 aa15.3■□□□□ 0.04
RAPGEF3-210ENST00000482843 TRMT2AQ8IZ69 625 aaKnown RBP15.3■□□□□ 0.04
RAPGEF3-210ENST00000482843 YTHDC2Q9H6S0 1430 aaKnown RBP15.29■□□□□ 0.04
RAPGEF3-210ENST00000482843 INSRP06213 1382 aa15.29■□□□□ 0.04
RAPGEF3-210ENST00000482843 DDRGK1Q96HY6 314 aa15.28■□□□□ 0.04
RAPGEF3-210ENST00000482843 TSPOAP1O95153 1857 aa15.28■□□□□ 0.04
RAPGEF3-210ENST00000482843 HDGFP51858 240 aaKnown RBP15.28■□□□□ 0.04
RAPGEF3-210ENST00000482843 DZIP1LQ8IYY4 767 aaKnown RBP15.28■□□□□ 0.04
RAPGEF3-210ENST00000482843 COG3Q96JB2 828 aa15.28■□□□□ 0.04
RAPGEF3-210ENST00000482843 PRDM10Q9NQV6 1147 aa15.28■□□□□ 0.04
RAPGEF3-210ENST00000482843 BBXQ8WY36 941 aaPredicted RBP15.27■□□□□ 0.04
RAPGEF3-210ENST00000482843 NUDT16Q96DE0 195 aaKnown RBP15.27■□□□□ 0.04
RAPGEF3-210ENST00000482843 LMTK2Q8IWU2 1503 aa15.27■□□□□ 0.03
RAPGEF3-210ENST00000482843 ZBTB7CA1YPR0 619 aa15.27■□□□□ 0.03
RAPGEF3-210ENST00000482843 PCDHB15Q9Y5E8 787 aa15.27■□□□□ 0.03
RAPGEF3-210ENST00000482843 KDM2BQ8NHM5 1336 aa15.26■□□□□ 0.03
RAPGEF3-210ENST00000482843 SSH1Q8WYL5 1049 aa15.26■□□□□ 0.03
RAPGEF3-210ENST00000482843 PMFBP1Q8TBY8 1022 aa15.26■□□□□ 0.03
RAPGEF3-210ENST00000482843 ZFP91Q96JP5 570 aaPredicted RBP15.26■□□□□ 0.03
RAPGEF3-210ENST00000482843 NOB1Q9ULX3 412 aaKnown RBP15.26■□□□□ 0.03
RAPGEF3-210ENST00000482843 PNNQ9H307 717 aaKnown RBP15.25■□□□□ 0.03
RAPGEF3-210ENST00000482843 RWDD1Q9H446 243 aaPredicted RBP15.25■□□□□ 0.03
RAPGEF3-210ENST00000482843 SPRYD3Q8NCJ5 442 aa15.25■□□□□ 0.03
RAPGEF3-210ENST00000482843 UPF2Q9HAU5 1272 aaKnown RBP15.25■□□□□ 0.03
RAPGEF3-210ENST00000482843 CFAP74Q9C0B2 1584 aa15.25■□□□□ 0.03
RAPGEF3-210ENST00000482843 DCTN1Q14203 1278 aa15.24■□□□□ 0.03
RAPGEF3-210ENST00000482843 PPP6R1Q9UPN7 881 aa15.24■□□□□ 0.03
RAPGEF3-210ENST00000482843 WASLO00401 505 aaPredicted RBP15.24■□□□□ 0.03
RAPGEF3-210ENST00000482843 NRXN1Q9ULB1 1477 aa15.24■□□□□ 0.03
RAPGEF3-210ENST00000482843 DIP2CQ9Y2E4 1556 aa15.24■□□□□ 0.03
RAPGEF3-210ENST00000482843 IGSF3O75054 1194 aa15.24■□□□□ 0.03
RAPGEF3-210ENST00000482843 POLKQ9UBT6 870 aa15.24■□□□□ 0.03
RAPGEF3-210ENST00000482843 PHACTR3Q96KR7 559 aa15.23■□□□□ 0.03
RAPGEF3-210ENST00000482843 NUTM2GQ5VZR2 741 aa15.23■□□□□ 0.03
RAPGEF3-210ENST00000482843 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.23■□□□□ 0.03
RAPGEF3-210ENST00000482843 PDZRN3Q9UPQ7 1066 aa15.23■□□□□ 0.03
RAPGEF3-210ENST00000482843 RIMS2Q9UQ26 1411 aa15.23■□□□□ 0.03
RAPGEF3-210ENST00000482843 ADGRB1O14514 1584 aa15.23■□□□□ 0.03
RAPGEF3-210ENST00000482843 GLI2P10070 1586 aa15.22■□□□□ 0.03
RAPGEF3-210ENST00000482843 CCDC61Q9Y6R9 512 aa15.22■□□□□ 0.03
RAPGEF3-210ENST00000482843 FBXO3Q9UK99 471 aa15.22■□□□□ 0.03
RAPGEF3-210ENST00000482843 TRIM35Q9UPQ4 493 aa15.22■□□□□ 0.03
RAPGEF3-210ENST00000482843 MYOM1P52179 1685 aa15.21■□□□□ 0.03
RAPGEF3-210ENST00000482843 FAM83GA6ND36 823 aa15.21■□□□□ 0.03
RAPGEF3-210ENST00000482843 TRIM27P14373 513 aa15.21■□□□□ 0.03
RAPGEF3-210ENST00000482843 SLKQ9H2G2 1235 aaPredicted RBP15.21■□□□□ 0.03
RAPGEF3-210ENST00000482843 QRICH2Q9H0J4 1663 aa15.21■□□□□ 0.03
RAPGEF3-210ENST00000482843 ABCC11Q96J66 1382 aa15.21■□□□□ 0.02
RAPGEF3-210ENST00000482843 C8orf34Q49A92 452 aa15.21■□□□□ 0.02
RAPGEF3-210ENST00000482843 NGDNQ8NEJ9 315 aaKnown RBP15.21■□□□□ 0.02
RAPGEF3-210ENST00000482843 C1orf115Q9H7X2 142 aa15.21■□□□□ 0.02
RAPGEF3-210ENST00000482843 TULP4Q9NRJ4 1543 aa15.2■□□□□ 0.02
RAPGEF3-210ENST00000482843 NSD2O96028 1365 aa15.2■□□□□ 0.02
RAPGEF3-210ENST00000482843 MVPQ14764 893 aaKnown RBP15.2■□□□□ 0.02
RAPGEF3-210ENST00000482843 PUS7Q96PZ0 661 aaKnown RBP15.2■□□□□ 0.02
RAPGEF3-210ENST00000482843 CAMSAP1Q5T5Y3 1602 aa15.2■□□□□ 0.02
RAPGEF3-210ENST00000482843 ZMYM3Q14202 1370 aa15.2■□□□□ 0.02
RAPGEF3-210ENST00000482843 IPO8O15397 1037 aaKnown RBP15.2■□□□□ 0.02
RAPGEF3-210ENST00000482843 RBM33Q96EV2 1170 aaKnown RBP15.2■□□□□ 0.02
RAPGEF3-210ENST00000482843 EID1Q9Y6B2 187 aa15.2■□□□□ 0.02
RAPGEF3-210ENST00000482843 APBB1O00213 710 aa15.19■□□□□ 0.02
RAPGEF3-210ENST00000482843 TMEM57Q8N5G2 664 aa15.19■□□□□ 0.02
RAPGEF3-210ENST00000482843 FCHSD2O94868 740 aa15.19■□□□□ 0.02
RAPGEF3-210ENST00000482843 LTV1Q96GA3 475 aaPredicted RBP15.19■□□□□ 0.02
RAPGEF3-210ENST00000482843 METP08581 1390 aa15.19■□□□□ 0.02
RAPGEF3-210ENST00000482843 ATF7IPQ6VMQ6 1270 aa15.18■□□□□ 0.02
RAPGEF3-210ENST00000482843 CNPY4Q8N129 248 aa15.18■□□□□ 0.02
RAPGEF3-210ENST00000482843 NEXMIFQ5QGS0 1516 aa15.18■□□□□ 0.02
RAPGEF3-210ENST00000482843 SEC24BO95487 1268 aa15.18■□□□□ 0.02
RAPGEF3-210ENST00000482843 SULT6B1Q6IMI4 303 aa15.18■□□□□ 0.02
RAPGEF3-210ENST00000482843 KIAA1210Q9ULL0 1709 aa15.18■□□□□ 0.02
RAPGEF3-210ENST00000482843 ARHGAP31Q2M1Z3 1444 aa15.18■□□□□ 0.02
RAPGEF3-210ENST00000482843 MFAP1P55081 439 aaKnown RBP15.18■□□□□ 0.02
RAPGEF3-210ENST00000482843 CCDC27Q2M243 656 aa15.17■□□□□ 0.02
RAPGEF3-210ENST00000482843 SETBP1Q9Y6X0 1596 aa15.17■□□□□ 0.02
RAPGEF3-210ENST00000482843 HSP90B1P14625 803 aaKnown RBP15.17■□□□□ 0.02
RAPGEF3-210ENST00000482843 PLEKHF1Q96S99 279 aa15.17■□□□□ 0.02
RAPGEF3-210ENST00000482843 LNPKQ9C0E8 428 aa15.16■□□□□ 0.02
RAPGEF3-210ENST00000482843 DDX19BQ9UMR2 479 aa15.16■□□□□ 0.02
RAPGEF3-210ENST00000482843 PPIP5K1Q6PFW1 1433 aa15.16■□□□□ 0.02
RAPGEF3-210ENST00000482843 AEBP1Q8IUX7 1158 aa15.15■□□□□ 0.02
RAPGEF3-210ENST00000482843 TSPYL6Q8N831 410 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms