RNA–Protein interactions for RNA: ENST00000482747.1

NELFCD-208, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 1,701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-208ENST00000482747 USP21Q9UK80 565 aa24.01■■□□□ 1.43
NELFCD-208ENST00000482747 TESK2Q96S53 571 aa24■■□□□ 1.43
NELFCD-208ENST00000482747 SBNO2Q9Y2G9 1366 aa24■■□□□ 1.43
NELFCD-208ENST00000482747 FNBP4Q8N3X1 1017 aaPredicted RBP23.99■■□□□ 1.43
NELFCD-208ENST00000482747 MARF1Q9Y4F3 1742 aaKnown RBP23.99■■□□□ 1.43
NELFCD-208ENST00000482747 USP47Q96K76 1375 aa23.99■■□□□ 1.43
NELFCD-208ENST00000482747 ABCA3Q99758 1704 aa23.98■■□□□ 1.43
NELFCD-208ENST00000482747 RXRBP28702 533 aa23.97■■□□□ 1.43
NELFCD-208ENST00000482747 ABTB2Q8N961 1025 aa23.97■■□□□ 1.43
NELFCD-208ENST00000482747 TMC1Q8TDI8 760 aa23.96■■□□□ 1.43
NELFCD-208ENST00000482747 BCL9LQ86UU0 1499 aa23.95■■□□□ 1.42
NELFCD-208ENST00000482747 FAM83GA6ND36 823 aa23.95■■□□□ 1.42
NELFCD-208ENST00000482747 SLC12A5Q9H2X9 1139 aa23.94■■□□□ 1.42
NELFCD-208ENST00000482747 ATAD2Q6PL18 1390 aa23.94■■□□□ 1.42
NELFCD-208ENST00000482747 USP6P35125 1406 aa23.94■■□□□ 1.42
NELFCD-208ENST00000482747 CRYBG1Q9Y4K1 1723 aa23.91■■□□□ 1.42
NELFCD-208ENST00000482747 ZC3H6P61129 1189 aaKnown RBP23.9■■□□□ 1.42
NELFCD-208ENST00000482747 TRPC5Q9UL62 973 aaPredicted RBP23.9■■□□□ 1.42
NELFCD-208ENST00000482747 SLIT2O94813 1529 aa23.9■■□□□ 1.42
NELFCD-208ENST00000482747 RBM6P78332 1123 aaKnown RBP23.9■■□□□ 1.42
NELFCD-208ENST00000482747 CHRNA2Q15822 529 aa23.88■■□□□ 1.41
NELFCD-208ENST00000482747 UNC5CLQ8IV45 518 aa23.88■■□□□ 1.41
NELFCD-208ENST00000482747 KTN1Q86UP2 1357 aaKnown RBP23.88■■□□□ 1.41
NELFCD-208ENST00000482747 ATRNO75882 1429 aa23.87■■□□□ 1.41
NELFCD-208ENST00000482747 NLRP6P59044 892 aa23.87■■□□□ 1.41
NELFCD-208ENST00000482747 CPSF1Q10570 1443 aaKnown RBP23.87■■□□□ 1.41
NELFCD-208ENST00000482747 SSH2Q76I76 1423 aa23.87■■□□□ 1.41
NELFCD-208ENST00000482747 ZNF692Q9BU19 519 aaPredicted RBP23.87■■□□□ 1.41
NELFCD-208ENST00000482747 KIAA0232Q92628 1395 aa23.86■■□□□ 1.41
NELFCD-208ENST00000482747 CD163L1Q9NR16 1453 aa23.86■■□□□ 1.41
NELFCD-208ENST00000482747 TTC21BQ7Z4L5 1316 aa23.86■■□□□ 1.41
NELFCD-208ENST00000482747 PLCH1Q4KWH8 1693 aa23.86■■□□□ 1.41
NELFCD-208ENST00000482747 AKAP12Q02952 1782 aa23.86■■□□□ 1.41
NELFCD-208ENST00000482747 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.86■■□□□ 1.41
NELFCD-208ENST00000482747 PRDM11Q9NQV5 511 aa23.86■■□□□ 1.41
NELFCD-208ENST00000482747 BTG4Q9NY30 223 aa23.86■■□□□ 1.41
NELFCD-208ENST00000482747 PHRF1Q9P1Y6 1649 aaKnown RBP23.86■■□□□ 1.41
NELFCD-208ENST00000482747 NLRP13Q86W25 1043 aa23.85■■□□□ 1.41
NELFCD-208ENST00000482747 TMF1P82094 1093 aa23.84■■□□□ 1.41
NELFCD-208ENST00000482747 ZRANB1Q9UGI0 708 aa23.84■■□□□ 1.41
NELFCD-208ENST00000482747 RGS12O14924 1447 aa23.83■■□□□ 1.41
NELFCD-208ENST00000482747 GCP02774 474 aa23.83■■□□□ 1.41
NELFCD-208ENST00000482747 GJD4Q96KN9 370 aaPredicted RBP23.83■■□□□ 1.41
NELFCD-208ENST00000482747 CCDC9Q9Y3X0 531 aaKnown RBP23.83■■□□□ 1.41
NELFCD-208ENST00000482747 PIK3C2AO00443 1686 aa23.83■■□□□ 1.4
NELFCD-208ENST00000482747 USP19O94966 1318 aa23.83■■□□□ 1.4
NELFCD-208ENST00000482747 ZBTB7CA1YPR0 619 aa23.82■■□□□ 1.4
NELFCD-208ENST00000482747 SOX12O15370 315 aa23.82■■□□□ 1.4
NELFCD-208ENST00000482747 A0A1W2PP64 1363 aa23.81■■□□□ 1.4
NELFCD-208ENST00000482747 BRD4O60885 1362 aaPredicted RBP23.81■■□□□ 1.4
NELFCD-208ENST00000482747 HDGFL2Q7Z4V5 671 aaPredicted RBP23.81■■□□□ 1.4
NELFCD-208ENST00000482747 NRKQ7Z2Y5 1582 aa23.8■■□□□ 1.4
NELFCD-208ENST00000482747 PUS7Q96PZ0 661 aaKnown RBP23.8■■□□□ 1.4
NELFCD-208ENST00000482747 HSPA5P11021 654 aaKnown RBP23.79■■□□□ 1.4
NELFCD-208ENST00000482747 NME9Q86XW9 330 aa23.79■■□□□ 1.4
NELFCD-208ENST00000482747 MON2Q7Z3U7 1717 aa23.79■■□□□ 1.4
NELFCD-208ENST00000482747 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.79■■□□□ 1.4
NELFCD-208ENST00000482747 COL14A1Q05707 1796 aaKnown RBP23.79■■□□□ 1.4
NELFCD-208ENST00000482747 TERF2IPQ9NYB0 399 aa23.78■■□□□ 1.4
NELFCD-208ENST00000482747 NWD2Q9ULI1 1742 aa23.78■■□□□ 1.4
NELFCD-208ENST00000482747 GLI3P10071 1580 aa23.77■■□□□ 1.4
NELFCD-208ENST00000482747 SLC24A1O60721 1099 aa23.77■■□□□ 1.4
NELFCD-208ENST00000482747 VPS72Q15906 364 aa23.77■■□□□ 1.4
NELFCD-208ENST00000482747 STRN4Q9NRL3 753 aa23.77■■□□□ 1.4
NELFCD-208ENST00000482747 CDK12Q9NYV4 1490 aaPredicted RBP23.77■■□□□ 1.4
NELFCD-208ENST00000482747 EIF4G2P78344 907 aaKnown RBP eCLIP23.76■■□□□ 1.39
NELFCD-208ENST00000482747 TTC21AQ8NDW8 1320 aa23.76■■□□□ 1.39
NELFCD-208ENST00000482747 POLR3GLQ9BT43 218 aa23.76■■□□□ 1.39
NELFCD-208ENST00000482747 NRAPQ86VF7 1730 aa23.75■■□□□ 1.39
NELFCD-208ENST00000482747 SLIT3O75094 1523 aa23.72■■□□□ 1.39
NELFCD-208ENST00000482747 EDC4Q6P2E9 1401 aaKnown RBP23.72■■□□□ 1.39
NELFCD-208ENST00000482747 CAMTA1Q9Y6Y1 1673 aa23.71■■□□□ 1.39
NELFCD-208ENST00000482747 CPDO75976 1380 aa23.71■■□□□ 1.39
NELFCD-208ENST00000482747 USP35Q9P2H5 1018 aa23.7■■□□□ 1.39
NELFCD-208ENST00000482747 EP400Q96L91 3159 aa23.7■■□□□ 1.39
NELFCD-208ENST00000482747 NINLQ9Y2I6 1382 aa23.7■■□□□ 1.38
NELFCD-208ENST00000482747 EVA1CP58658 441 aa23.7■■□□□ 1.38
NELFCD-208ENST00000482747 FAM98CQ17RN3 349 aaKnown RBP23.7■■□□□ 1.38
NELFCD-208ENST00000482747 CDCA8Q53HL2 280 aa23.7■■□□□ 1.38
NELFCD-208ENST00000482747 ANKRD36BQ8N2N9 1353 aa23.69■■□□□ 1.38
NELFCD-208ENST00000482747 A0A0G2JS52 829 aa23.68■■□□□ 1.38
NELFCD-208ENST00000482747 MYT1Q01538 1121 aa23.68■■□□□ 1.38
NELFCD-208ENST00000482747 SEPT12Q8IYM1 358 aa23.68■■□□□ 1.38
NELFCD-208ENST00000482747 AXIN2Q9Y2T1 843 aa23.68■■□□□ 1.38
NELFCD-208ENST00000482747 SPATA31A5Q5VU36 1347 aa23.68■■□□□ 1.38
NELFCD-208ENST00000482747 SPATA31A7Q8IWB4 1347 aa23.68■■□□□ 1.38
NELFCD-208ENST00000482747 LARP1Q6PKG0 1096 aaKnown RBP23.67■■□□□ 1.38
NELFCD-208ENST00000482747 KCNH5Q8NCM2 988 aa23.67■■□□□ 1.38
NELFCD-208ENST00000482747 LMO7Q8WWI1 1683 aa23.66■■□□□ 1.38
NELFCD-208ENST00000482747 C11orf95C9JLR9 678 aaPredicted RBP23.66■■□□□ 1.38
NELFCD-208ENST00000482747 UPF1Q92900 1129 aaKnown RBP eCLIP23.66■■□□□ 1.38
NELFCD-208ENST00000482747 USP31Q70CQ4 1352 aa23.66■■□□□ 1.38
NELFCD-208ENST00000482747 MYOM1P52179 1685 aa23.65■■□□□ 1.38
NELFCD-208ENST00000482747 ARHGEF25Q86VW2 580 aa23.65■■□□□ 1.38
NELFCD-208ENST00000482747 FBLN1P23142 703 aa23.64■■□□□ 1.38
NELFCD-208ENST00000482747 CARD14Q9BXL6 1004 aa23.64■■□□□ 1.37
NELFCD-208ENST00000482747 NFAT5O94916 1531 aa23.64■■□□□ 1.37
NELFCD-208ENST00000482747 SPATA31A1Q5TZJ5 1347 aa23.63■■□□□ 1.37
NELFCD-208ENST00000482747 ONECUT3O60422 494 aaPredicted RBP23.63■■□□□ 1.37
NELFCD-208ENST00000482747 AATKQ6ZMQ8 1374 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms