RNA–Protein interactions for RNA: ENST00000482741.1

TVP23B-203, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 3,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-203ENST00000482741 LRPPRCP42704 1394 aaKnown RBP11.18□□□□□ -0.62
TVP23B-203ENST00000482741 LRRC37A3O60309 1634 aa11.17□□□□□ -0.62
TVP23B-203ENST00000482741 RGS22Q8NE09 1264 aa11.17□□□□□ -0.62
TVP23B-203ENST00000482741 NCAPD2Q15021 1401 aa11.17□□□□□ -0.62
TVP23B-203ENST00000482741 BCL11BQ9C0K0 894 aaPredicted RBP11.17□□□□□ -0.62
TVP23B-203ENST00000482741 SSH2Q76I76 1423 aa11.16□□□□□ -0.62
TVP23B-203ENST00000482741 HSP90B1P14625 803 aaKnown RBP11.16□□□□□ -0.62
TVP23B-203ENST00000482741 AFAP1Q8N556 730 aa11.16□□□□□ -0.62
TVP23B-203ENST00000482741 FAM117AQ9C073 453 aa11.16□□□□□ -0.62
TVP23B-203ENST00000482741 RIMS2Q9UQ26 1411 aa11.15□□□□□ -0.62
TVP23B-203ENST00000482741 CD163L1Q9NR16 1453 aa11.14□□□□□ -0.63
TVP23B-203ENST00000482741 PKD1L3Q7Z443 1732 aa11.14□□□□□ -0.63
TVP23B-203ENST00000482741 SIPA1L3O60292 1781 aaPredicted RBP11.13□□□□□ -0.63
TVP23B-203ENST00000482741 PAPPAQ13219 1627 aa11.12□□□□□ -0.63
TVP23B-203ENST00000482741 VIRMAQ69YN4 1812 aaKnown RBP11.12□□□□□ -0.63
TVP23B-203ENST00000482741 KRI1Q8N9T8 703 aaKnown RBP11.11□□□□□ -0.63
TVP23B-203ENST00000482741 FBXW7Q969H0 707 aa11.11□□□□□ -0.63
TVP23B-203ENST00000482741 COL24A1Q17RW2 1714 aa11.11□□□□□ -0.63
TVP23B-203ENST00000482741 PTPRUQ92729 1446 aa11.11□□□□□ -0.63
TVP23B-203ENST00000482741 RGPD8O14715 1765 aaPredicted RBP11.11□□□□□ -0.63
TVP23B-203ENST00000482741 RETREG2Q8NC44 543 aa11.11□□□□□ -0.63
TVP23B-203ENST00000482741 CARNS1A5YM72 827 aa11.1□□□□□ -0.63
TVP23B-203ENST00000482741 ROCK2O75116 1388 aaKnown RBP11.1□□□□□ -0.63
TVP23B-203ENST00000482741 SHANK3Q9BYB0 1731 aa11.09□□□□□ -0.63
TVP23B-203ENST00000482741 EIF3AQ14152 1382 aaKnown RBP11.09□□□□□ -0.63
TVP23B-203ENST00000482741 CPSF1Q10570 1443 aaKnown RBP11.08□□□□□ -0.64
TVP23B-203ENST00000482741 COL16A1Q07092 1604 aaPredicted RBP11.08□□□□□ -0.64
TVP23B-203ENST00000482741 RREB1Q92766 1687 aa11.08□□□□□ -0.64
TVP23B-203ENST00000482741 LRP6O75581 1613 aa11.08□□□□□ -0.64
TVP23B-203ENST00000482741 PPP1R15AO75807 674 aaPredicted RBP11.08□□□□□ -0.64
TVP23B-203ENST00000482741 C14orf93Q9H972 538 aaKnown RBP11.08□□□□□ -0.64
TVP23B-203ENST00000482741 QSER1Q2KHR3 1735 aa11.07□□□□□ -0.64
TVP23B-203ENST00000482741 ZNF316A6NFI3 1004 aaPredicted RBP11.07□□□□□ -0.64
TVP23B-203ENST00000482741 YTHDC2Q9H6S0 1430 aaKnown RBP11.07□□□□□ -0.64
TVP23B-203ENST00000482741 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.07□□□□□ -0.64
TVP23B-203ENST00000482741 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.06□□□□□ -0.64
TVP23B-203ENST00000482741 HNRNPUL2Q1KMD3 747 aaKnown RBP11.06□□□□□ -0.64
TVP23B-203ENST00000482741 NPHP4O75161 1426 aaPredicted RBP11.06□□□□□ -0.64
TVP23B-203ENST00000482741 ZMYND10O75800 440 aa11.06□□□□□ -0.64
TVP23B-203ENST00000482741 WASHC2AQ641Q2 1341 aa11.06□□□□□ -0.64
TVP23B-203ENST00000482741 WASHC2CQ9Y4E1 1318 aa11.06□□□□□ -0.64
TVP23B-203ENST00000482741 POLR3AO14802 1390 aaPredicted RBP11.05□□□□□ -0.64
TVP23B-203ENST00000482741 RBM26Q5T8P6 1007 aaKnown RBP11.05□□□□□ -0.64
TVP23B-203ENST00000482741 ADGRL3Q9HAR2 1447 aa11.05□□□□□ -0.64
TVP23B-203ENST00000482741 NFAT5O94916 1531 aa11.04□□□□□ -0.64
TVP23B-203ENST00000482741 RAPGEF3O95398 923 aa11.04□□□□□ -0.64
TVP23B-203ENST00000482741 IRF5Q13568 498 aa11.04□□□□□ -0.64
TVP23B-203ENST00000482741 NSD2O96028 1365 aa11.04□□□□□ -0.64
TVP23B-203ENST00000482741 GLI3P10071 1580 aa11.04□□□□□ -0.64
TVP23B-203ENST00000482741 PHLPP1O60346 1717 aa11.04□□□□□ -0.64
TVP23B-203ENST00000482741 LTN1O94822 1766 aa11.03□□□□□ -0.64
TVP23B-203ENST00000482741 COL3A1P02461 1466 aaPredicted RBP11.03□□□□□ -0.64
TVP23B-203ENST00000482741 PPM1GO15355 546 aaPredicted RBP11.02□□□□□ -0.65
TVP23B-203ENST00000482741 KIF24Q5T7B8 1368 aa11.01□□□□□ -0.65
TVP23B-203ENST00000482741 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.01□□□□□ -0.65
TVP23B-203ENST00000482741 RIOK3O14730 519 aaKnown RBP11.01□□□□□ -0.65
TVP23B-203ENST00000482741 ZFP91Q96JP5 570 aaPredicted RBP11.01□□□□□ -0.65
TVP23B-203ENST00000482741 TBX22Q9Y458 520 aa11.01□□□□□ -0.65
TVP23B-203ENST00000482741 PXDNQ92626 1479 aa11□□□□□ -0.65
TVP23B-203ENST00000482741 COL14A1Q05707 1796 aaKnown RBP11□□□□□ -0.65
TVP23B-203ENST00000482741 USP31Q70CQ4 1352 aa11□□□□□ -0.65
TVP23B-203ENST00000482741 POM121Q96HA1 1249 aa10.99□□□□□ -0.65
TVP23B-203ENST00000482741 E9PSI1 815 aa10.99□□□□□ -0.65
TVP23B-203ENST00000482741 CFAP65Q6ZU64 1925 aaKnown RBP10.98□□□□□ -0.65
TVP23B-203ENST00000482741 RRP7BPQ9NSQ0 103 aa10.97□□□□□ -0.65
TVP23B-203ENST00000482741 UBR2Q8IWV8 1755 aa10.97□□□□□ -0.65
TVP23B-203ENST00000482741 KCNH8Q96L42 1107 aa10.97□□□□□ -0.65
TVP23B-203ENST00000482741 DCAF8Q5TAQ9 597 aa10.96□□□□□ -0.65
TVP23B-203ENST00000482741 FAM177A1Q8N128 213 aaPredicted RBP10.96□□□□□ -0.65
TVP23B-203ENST00000482741 ATP1B4Q9UN42 357 aaPredicted RBP10.96□□□□□ -0.66
TVP23B-203ENST00000482741 PDE4DQ08499 809 aa10.96□□□□□ -0.66
TVP23B-203ENST00000482741 THSD7AQ9UPZ6 1657 aa10.95□□□□□ -0.66
TVP23B-203ENST00000482741 FAM50AQ14320 339 aaKnown RBP10.95□□□□□ -0.66
TVP23B-203ENST00000482741 KDM4FA0A1W2PPD8 638 aa10.94□□□□□ -0.66
TVP23B-203ENST00000482741 TRAK2O60296 914 aa10.94□□□□□ -0.66
TVP23B-203ENST00000482741 SPINK5Q9NQ38 1064 aaPredicted RBP10.94□□□□□ -0.66
TVP23B-203ENST00000482741 HMGB1P09429 215 aaKnown RBP10.93□□□□□ -0.66
TVP23B-203ENST00000482741 IRX6P78412 446 aaPredicted RBP10.93□□□□□ -0.66
TVP23B-203ENST00000482741 KIF3BO15066 747 aa10.93□□□□□ -0.66
TVP23B-203ENST00000482741 TESK2Q96S53 571 aa10.92□□□□□ -0.66
TVP23B-203ENST00000482741 CWC22Q9HCG8 908 aaKnown RBP10.92□□□□□ -0.66
TVP23B-203ENST00000482741 ROBO1Q9Y6N7 1651 aa10.92□□□□□ -0.66
TVP23B-203ENST00000482741 KDM3BQ7LBC6 1761 aa10.92□□□□□ -0.66
TVP23B-203ENST00000482741 OVOS2A0A0J9YW53 1432 aa10.92□□□□□ -0.66
TVP23B-203ENST00000482741 OVOS2Q6IE36 1432 aa10.92□□□□□ -0.66
TVP23B-203ENST00000482741 TESPA1A2RU30 521 aaPredicted RBP10.92□□□□□ -0.66
TVP23B-203ENST00000482741 ZNF692Q9BU19 519 aaPredicted RBP10.91□□□□□ -0.66
TVP23B-203ENST00000482741 LAMB4A4D0S4 1761 aa10.91□□□□□ -0.66
TVP23B-203ENST00000482741 ABCB7O75027 752 aa10.91□□□□□ -0.66
TVP23B-203ENST00000482741 AATKQ6ZMQ8 1374 aa10.9□□□□□ -0.66
TVP23B-203ENST00000482741 CCDC97Q96F63 343 aaPredicted RBP10.9□□□□□ -0.66
TVP23B-203ENST00000482741 PLEKHG3A1L390 1219 aa10.89□□□□□ -0.67
TVP23B-203ENST00000482741 VGFO15240 615 aaPredicted RBP10.89□□□□□ -0.67
TVP23B-203ENST00000482741 AK7Q96M32 723 aa10.89□□□□□ -0.67
TVP23B-203ENST00000482741 HDGFP51858 240 aaKnown RBP10.89□□□□□ -0.67
TVP23B-203ENST00000482741 OVOS2A0A0G2JMS6 1433 aa10.89□□□□□ -0.67
TVP23B-203ENST00000482741 PARD3Q8TEW0 1356 aa10.89□□□□□ -0.67
TVP23B-203ENST00000482741 MLLT3P42568 568 aaPredicted RBP10.89□□□□□ -0.67
TVP23B-203ENST00000482741 BARGINQ6ZT62 677 aa10.89□□□□□ -0.67
TVP23B-203ENST00000482741 IBTKQ9P2D0 1353 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms