RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 TRAK2O60296 914 aa18.09■□□□□ 0.49
COL9A2-207ENST00000482722 NEXMIFQ5QGS0 1516 aa18.09■□□□□ 0.49
COL9A2-207ENST00000482722 PDZRN3Q9UPQ7 1066 aa18.09■□□□□ 0.49
COL9A2-207ENST00000482722 RUNDC1Q96C34 613 aa18.08■□□□□ 0.48
COL9A2-207ENST00000482722 POLR3AO14802 1390 aaPredicted RBP18.08■□□□□ 0.48
COL9A2-207ENST00000482722 MRE11P49959 708 aa18.07■□□□□ 0.48
COL9A2-207ENST00000482722 RARSP54136 660 aaKnown RBP18.07■□□□□ 0.48
COL9A2-207ENST00000482722 PREX1Q8TCU6 1659 aa18.06■□□□□ 0.48
COL9A2-207ENST00000482722 KIF13AQ9H1H9 1805 aa18.06■□□□□ 0.48
COL9A2-207ENST00000482722 U2AF1L5P0DN76 240 aaPredicted RBP18.06■□□□□ 0.48
COL9A2-207ENST00000482722 U2AF1Q01081 240 aaKnown RBP eCLIP18.06■□□□□ 0.48
COL9A2-207ENST00000482722 GGNBP2Q9H3C7 697 aa18.06■□□□□ 0.48
COL9A2-207ENST00000482722 CLTCQ00610 1675 aaKnown RBP18.06■□□□□ 0.48
COL9A2-207ENST00000482722 ARHGAP31Q2M1Z3 1444 aa18.06■□□□□ 0.48
COL9A2-207ENST00000482722 ERBB4Q15303 1308 aa18.06■□□□□ 0.48
COL9A2-207ENST00000482722 CFAP53Q96M91 514 aa18.05■□□□□ 0.48
COL9A2-207ENST00000482722 EVC2Q86UK5 1308 aa18.05■□□□□ 0.48
COL9A2-207ENST00000482722 NCKAP5LQ9HCH0 1330 aa18.05■□□□□ 0.48
COL9A2-207ENST00000482722 QRICH2Q9H0J4 1663 aa18.05■□□□□ 0.48
COL9A2-207ENST00000482722 NUTM2FA1L443 756 aa18.05■□□□□ 0.48
COL9A2-207ENST00000482722 GRPEL1Q9HAV7 217 aa18.05■□□□□ 0.48
COL9A2-207ENST00000482722 CHMP5Q9NZZ3 219 aa18.05■□□□□ 0.48
COL9A2-207ENST00000482722 NINLQ9Y2I6 1382 aa18.04■□□□□ 0.48
COL9A2-207ENST00000482722 ESPNB1AK53 854 aa18.04■□□□□ 0.48
COL9A2-207ENST00000482722 PMFBP1Q8TBY8 1022 aa18.04■□□□□ 0.48
COL9A2-207ENST00000482722 MYH16Q9H6N6 1097 aa18.04■□□□□ 0.48
COL9A2-207ENST00000482722 TXNDC2Q86VQ3 553 aa18.04■□□□□ 0.48
COL9A2-207ENST00000482722 NEURL4Q96JN8 1562 aa18.03■□□□□ 0.48
COL9A2-207ENST00000482722 ZMYM3Q14202 1370 aa18.03■□□□□ 0.48
COL9A2-207ENST00000482722 SBNO2Q9Y2G9 1366 aa18.02■□□□□ 0.48
COL9A2-207ENST00000482722 NGEFQ8N5V2 710 aa18.02■□□□□ 0.48
COL9A2-207ENST00000482722 TMEM131LA2VDJ0 1609 aa18.02■□□□□ 0.48
COL9A2-207ENST00000482722 U2SURPO15042 1029 aaKnown RBP18.02■□□□□ 0.48
COL9A2-207ENST00000482722 MFAP1P55081 439 aaKnown RBP18.02■□□□□ 0.48
COL9A2-207ENST00000482722 CABP1Q9NZU7 370 aa18.01■□□□□ 0.47
COL9A2-207ENST00000482722 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.01■□□□□ 0.47
COL9A2-207ENST00000482722 CDK19Q9BWU1 502 aa18.01■□□□□ 0.47
COL9A2-207ENST00000482722 TSR2Q969E8 191 aaKnown RBP17.99■□□□□ 0.47
COL9A2-207ENST00000482722 C22orf23Q9BZE7 217 aa17.99■□□□□ 0.47
COL9A2-207ENST00000482722 TULP4Q9NRJ4 1543 aa17.99■□□□□ 0.47
COL9A2-207ENST00000482722 SETBP1Q9Y6X0 1596 aa17.99■□□□□ 0.47
COL9A2-207ENST00000482722 RWDD1Q9H446 243 aaPredicted RBP17.98■□□□□ 0.47
COL9A2-207ENST00000482722 YTHDC2Q9H6S0 1430 aaKnown RBP17.98■□□□□ 0.47
COL9A2-207ENST00000482722 MYO3AQ8NEV4 1616 aa17.97■□□□□ 0.47
COL9A2-207ENST00000482722 SHPRHQ149N8 1683 aa17.96■□□□□ 0.47
COL9A2-207ENST00000482722 DDX11L8A8MPP1 907 aa17.96■□□□□ 0.47
COL9A2-207ENST00000482722 SLC26A8Q96RN1 970 aa17.96■□□□□ 0.47
COL9A2-207ENST00000482722 ZNF692Q9BU19 519 aaPredicted RBP17.96■□□□□ 0.47
COL9A2-207ENST00000482722 ARHGEF28Q8N1W1 1705 aaKnown RBP17.96■□□□□ 0.47
COL9A2-207ENST00000482722 WDR63Q8IWG1 891 aa17.96■□□□□ 0.47
COL9A2-207ENST00000482722 A0A1W2PP64 1363 aa17.95■□□□□ 0.46
COL9A2-207ENST00000482722 FTSJ3Q8IY81 847 aaKnown RBP17.95■□□□□ 0.46
COL9A2-207ENST00000482722 TRIM44Q96DX7 344 aaPredicted RBP17.95■□□□□ 0.46
COL9A2-207ENST00000482722 RIMS2Q9UQ26 1411 aa17.95■□□□□ 0.46
COL9A2-207ENST00000482722 A2ML1A8K2U0 1454 aa17.95■□□□□ 0.46
COL9A2-207ENST00000482722 METP08581 1390 aa17.95■□□□□ 0.46
COL9A2-207ENST00000482722 ZC3H13Q5T200 1668 aaKnown RBP17.95■□□□□ 0.46
COL9A2-207ENST00000482722 GAS2L3Q86XJ1 694 aa17.94■□□□□ 0.46
COL9A2-207ENST00000482722 AAMPQ13685 434 aa17.93■□□□□ 0.46
COL9A2-207ENST00000482722 ZRANB1Q9UGI0 708 aa17.93■□□□□ 0.46
COL9A2-207ENST00000482722 ISY1Q9ULR0 285 aaKnown RBP17.93■□□□□ 0.46
COL9A2-207ENST00000482722 ALKQ9UM73 1620 aa17.93■□□□□ 0.46
COL9A2-207ENST00000482722 HSCBQ8IWL3 235 aa17.93■□□□□ 0.46
COL9A2-207ENST00000482722 FYB1O15117 783 aa17.92■□□□□ 0.46
COL9A2-207ENST00000482722 LTKP29376 864 aa17.92■□□□□ 0.46
COL9A2-207ENST00000482722 MVPQ14764 893 aaKnown RBP17.92■□□□□ 0.46
COL9A2-207ENST00000482722 PTPRMP28827 1452 aa17.92■□□□□ 0.46
COL9A2-207ENST00000482722 PHF23Q9BUL5 403 aaPredicted RBP17.92■□□□□ 0.46
COL9A2-207ENST00000482722 SMC4Q9NTJ3 1288 aa17.92■□□□□ 0.46
COL9A2-207ENST00000482722 IQSEC2Q5JU85 1478 aa17.91■□□□□ 0.46
COL9A2-207ENST00000482722 ANKRD36BQ8N2N9 1353 aa17.91■□□□□ 0.46
COL9A2-207ENST00000482722 TPM2P07951 284 aa17.91■□□□□ 0.46
COL9A2-207ENST00000482722 EXOSC9Q06265 439 aaKnown RBP17.91■□□□□ 0.46
COL9A2-207ENST00000482722 DZIP1LQ8IYY4 767 aaKnown RBP17.9■□□□□ 0.46
COL9A2-207ENST00000482722 ZKSCAN2Q63HK3 967 aa17.89■□□□□ 0.46
COL9A2-207ENST00000482722 DDIT3P35638 169 aa17.89■□□□□ 0.45
COL9A2-207ENST00000482722 ITPRIPQ8IWB1 547 aa17.89■□□□□ 0.45
COL9A2-207ENST00000482722 TNPO1Q92973 898 aaKnown RBP17.89■□□□□ 0.45
COL9A2-207ENST00000482722 ZFYVE9O95405 1425 aa17.89■□□□□ 0.45
COL9A2-207ENST00000482722 CCDC27Q2M243 656 aa17.88■□□□□ 0.45
COL9A2-207ENST00000482722 PPP6R1Q9UPN7 881 aa17.88■□□□□ 0.45
COL9A2-207ENST00000482722 NCOA3Q9Y6Q9 1424 aa17.88■□□□□ 0.45
COL9A2-207ENST00000482722 AGLP35573 1532 aa17.87■□□□□ 0.45
COL9A2-207ENST00000482722 PDCL3Q9H2J4 239 aa17.87■□□□□ 0.45
COL9A2-207ENST00000482722 TMPOP42166 694 aaKnown RBP17.86■□□□□ 0.45
COL9A2-207ENST00000482722 KIAA1211Q6ZU35 1233 aa17.86■□□□□ 0.45
COL9A2-207ENST00000482722 FOXD4L1Q9NU39 408 aa17.86■□□□□ 0.45
COL9A2-207ENST00000482722 TRIM27P14373 513 aa17.86■□□□□ 0.45
COL9A2-207ENST00000482722 RBM33Q96EV2 1170 aaKnown RBP17.86■□□□□ 0.45
COL9A2-207ENST00000482722 TERF2IPQ9NYB0 399 aa17.86■□□□□ 0.45
COL9A2-207ENST00000482722 TNRQ92752 1358 aa17.86■□□□□ 0.45
COL9A2-207ENST00000482722 SOX12O15370 315 aa17.85■□□□□ 0.45
COL9A2-207ENST00000482722 ARHGEF40Q8TER5 1519 aa17.85■□□□□ 0.45
COL9A2-207ENST00000482722 SSH1Q8WYL5 1049 aa17.85■□□□□ 0.45
COL9A2-207ENST00000482722 RIPK4P57078 832 aa17.84■□□□□ 0.45
COL9A2-207ENST00000482722 NME9Q86XW9 330 aa17.84■□□□□ 0.45
COL9A2-207ENST00000482722 HDGFL2Q7Z4V5 671 aaPredicted RBP17.83■□□□□ 0.44
COL9A2-207ENST00000482722 LNPKQ9C0E8 428 aa17.83■□□□□ 0.44
COL9A2-207ENST00000482722 TRIM35Q9UPQ4 493 aa17.83■□□□□ 0.44
COL9A2-207ENST00000482722 SPATA31D1Q6ZQQ2 1576 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms