RNA–Protein interactions for RNA: ENST00000482693.1

SF1-215, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-215ENST00000482693 COL22A1Q8NFW1 1626 aaPredicted RBP23.31■■□□□ 1.32
SF1-215ENST00000482693 KTN1Q86UP2 1357 aaKnown RBP23.3■■□□□ 1.32
SF1-215ENST00000482693 MED1Q15648 1581 aaPredicted RBP23.3■■□□□ 1.32
SF1-215ENST00000482693 MEX3CQ5U5Q3 659 aaKnown RBP23.29■■□□□ 1.32
SF1-215ENST00000482693 SSH2Q76I76 1423 aa23.29■■□□□ 1.32
SF1-215ENST00000482693 ABTB2Q8N961 1025 aa23.29■■□□□ 1.32
SF1-215ENST00000482693 CD163L1Q9NR16 1453 aa23.28■■□□□ 1.32
SF1-215ENST00000482693 LRP6O75581 1613 aa23.27■■□□□ 1.32
SF1-215ENST00000482693 TTC21BQ7Z4L5 1316 aa23.27■■□□□ 1.32
SF1-215ENST00000482693 ALS2Q96Q42 1657 aa23.26■■□□□ 1.31
SF1-215ENST00000482693 TTC21AQ8NDW8 1320 aa23.26■■□□□ 1.31
SF1-215ENST00000482693 HAP1P54257 671 aaPredicted RBP23.25■■□□□ 1.31
SF1-215ENST00000482693 A0A1W2PP64 1363 aa23.25■■□□□ 1.31
SF1-215ENST00000482693 C11orf95C9JLR9 678 aaPredicted RBP23.24■■□□□ 1.31
SF1-215ENST00000482693 ADAMTS2O95450 1211 aa23.24■■□□□ 1.31
SF1-215ENST00000482693 NLRP13Q86W25 1043 aa23.24■■□□□ 1.31
SF1-215ENST00000482693 CABLES1Q8TDN4 633 aa23.24■■□□□ 1.31
SF1-215ENST00000482693 ANKRD36BQ8N2N9 1353 aa23.24■■□□□ 1.31
SF1-215ENST00000482693 AKAP12Q02952 1782 aa23.23■■□□□ 1.31
SF1-215ENST00000482693 POLR3GLQ9BT43 218 aa23.23■■□□□ 1.31
SF1-215ENST00000482693 PHF23Q9BUL5 403 aaPredicted RBP23.23■■□□□ 1.31
SF1-215ENST00000482693 NUTM2GQ5VZR2 741 aa23.22■■□□□ 1.31
SF1-215ENST00000482693 EDC4Q6P2E9 1401 aaKnown RBP23.22■■□□□ 1.31
SF1-215ENST00000482693 PLEKHG5O94827 1062 aa23.21■■□□□ 1.31
SF1-215ENST00000482693 NLRP6P59044 892 aa23.21■■□□□ 1.31
SF1-215ENST00000482693 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.2■■□□□ 1.3
SF1-215ENST00000482693 NGLY1Q96IV0 654 aa23.19■■□□□ 1.3
SF1-215ENST00000482693 C8orf37Q96NL8 207 aa23.19■■□□□ 1.3
SF1-215ENST00000482693 USP19O94966 1318 aa23.18■■□□□ 1.3
SF1-215ENST00000482693 KIF7Q2M1P5 1343 aa23.18■■□□□ 1.3
SF1-215ENST00000482693 MON2Q7Z3U7 1717 aa23.18■■□□□ 1.3
SF1-215ENST00000482693 NRKQ7Z2Y5 1582 aa23.16■■□□□ 1.3
SF1-215ENST00000482693 USP31Q70CQ4 1352 aa23.14■■□□□ 1.3
SF1-215ENST00000482693 GCP02774 474 aa23.14■■□□□ 1.29
SF1-215ENST00000482693 ZNF772Q68DY9 489 aaPredicted RBP23.14■■□□□ 1.29
SF1-215ENST00000482693 NME9Q86XW9 330 aa23.14■■□□□ 1.29
SF1-215ENST00000482693 FNBP4Q8N3X1 1017 aaPredicted RBP23.14■■□□□ 1.29
SF1-215ENST00000482693 CARD14Q9BXL6 1004 aa23.14■■□□□ 1.29
SF1-215ENST00000482693 RGS17Q9UGC6 210 aaPredicted RBP23.14■■□□□ 1.29
SF1-215ENST00000482693 AFF2P51816 1311 aa23.13■■□□□ 1.29
SF1-215ENST00000482693 MYOM1P52179 1685 aa23.13■■□□□ 1.29
SF1-215ENST00000482693 PIK3C2AO00443 1686 aa23.13■■□□□ 1.29
SF1-215ENST00000482693 KCNH5Q8NCM2 988 aa23.12■■□□□ 1.29
SF1-215ENST00000482693 FAM83GA6ND36 823 aa23.11■■□□□ 1.29
SF1-215ENST00000482693 PANK3Q9H999 370 aa23.11■■□□□ 1.29
SF1-215ENST00000482693 CCDC7Q96M83 1385 aa23.11■■□□□ 1.29
SF1-215ENST00000482693 ABCA3Q99758 1704 aa23.11■■□□□ 1.29
SF1-215ENST00000482693 ZRANB1Q9UGI0 708 aa23.1■■□□□ 1.29
SF1-215ENST00000482693 CRYBG1Q9Y4K1 1723 aa23.1■■□□□ 1.29
SF1-215ENST00000482693 WASHC2AQ641Q2 1341 aa23.09■■□□□ 1.29
SF1-215ENST00000482693 ZC3H6P61129 1189 aaKnown RBP23.09■■□□□ 1.29
SF1-215ENST00000482693 PRDM11Q9NQV5 511 aa23.09■■□□□ 1.29
SF1-215ENST00000482693 USP21Q9UK80 565 aa23.09■■□□□ 1.29
SF1-215ENST00000482693 FYB1O15117 783 aa23.08■■□□□ 1.29
SF1-215ENST00000482693 CPDO75976 1380 aa23.08■■□□□ 1.29
SF1-215ENST00000482693 KIAA0232Q92628 1395 aa23.08■■□□□ 1.29
SF1-215ENST00000482693 MARF1Q9Y4F3 1742 aaKnown RBP23.08■■□□□ 1.28
SF1-215ENST00000482693 SLIT3O75094 1523 aa23.08■■□□□ 1.28
SF1-215ENST00000482693 NSD3Q9BZ95 1437 aa23.08■■□□□ 1.28
SF1-215ENST00000482693 COG3Q96JB2 828 aa23.07■■□□□ 1.28
SF1-215ENST00000482693 PHRF1Q9P1Y6 1649 aaKnown RBP23.07■■□□□ 1.28
SF1-215ENST00000482693 CGNL1Q0VF96 1302 aa23.06■■□□□ 1.28
SF1-215ENST00000482693 SLIT2O94813 1529 aa23.05■■□□□ 1.28
SF1-215ENST00000482693 POTEAQ6S8J7 498 aa23.04■■□□□ 1.28
SF1-215ENST00000482693 UNC5CLQ8IV45 518 aa23.04■■□□□ 1.28
SF1-215ENST00000482693 QTRT2Q9H974 415 aaKnown RBP23.04■■□□□ 1.28
SF1-215ENST00000482693 OVOS2A0A0J9YW53 1432 aa23.04■■□□□ 1.28
SF1-215ENST00000482693 OVOS2Q6IE36 1432 aa23.04■■□□□ 1.28
SF1-215ENST00000482693 BCL9LQ86UU0 1499 aa23.04■■□□□ 1.28
SF1-215ENST00000482693 GGNBP2Q9H3C7 697 aa23.03■■□□□ 1.28
SF1-215ENST00000482693 TRPC5Q9UL62 973 aaPredicted RBP23.03■■□□□ 1.28
SF1-215ENST00000482693 USP54Q70EL1 1684 aa23.03■■□□□ 1.28
SF1-215ENST00000482693 CHRNA2Q15822 529 aa23.02■■□□□ 1.28
SF1-215ENST00000482693 ARHGEF25Q86VW2 580 aa23.02■■□□□ 1.28
SF1-215ENST00000482693 BTG4Q9NY30 223 aa23.02■■□□□ 1.28
SF1-215ENST00000482693 COL14A1Q05707 1796 aaKnown RBP23.01■■□□□ 1.27
SF1-215ENST00000482693 SOX12O15370 315 aa23.01■■□□□ 1.27
SF1-215ENST00000482693 KNSTRNQ9Y448 316 aa23.01■■□□□ 1.27
SF1-215ENST00000482693 AATKQ6ZMQ8 1374 aa23■■□□□ 1.27
SF1-215ENST00000482693 NFAT5O94916 1531 aa22.98■■□□□ 1.27
SF1-215ENST00000482693 ZBTB7CA1YPR0 619 aa22.98■■□□□ 1.27
SF1-215ENST00000482693 RXRBP28702 533 aa22.98■■□□□ 1.27
SF1-215ENST00000482693 ATRNO75882 1429 aa22.98■■□□□ 1.27
SF1-215ENST00000482693 VPS72Q15906 364 aa22.97■■□□□ 1.27
SF1-215ENST00000482693 NWD2Q9ULI1 1742 aa22.96■■□□□ 1.27
SF1-215ENST00000482693 RBM6P78332 1123 aaKnown RBP22.96■■□□□ 1.27
SF1-215ENST00000482693 PER1O15534 1290 aaPredicted RBP22.95■■□□□ 1.26
SF1-215ENST00000482693 NSD2O96028 1365 aa22.95■■□□□ 1.26
SF1-215ENST00000482693 EVA1CP58658 441 aa22.95■■□□□ 1.26
SF1-215ENST00000482693 PLCH1Q4KWH8 1693 aa22.95■■□□□ 1.26
SF1-215ENST00000482693 GJD4Q96KN9 370 aaPredicted RBP22.94■■□□□ 1.26
SF1-215ENST00000482693 KIF20BQ96Q89 1820 aa22.93■■□□□ 1.26
SF1-215ENST00000482693 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.93■■□□□ 1.26
SF1-215ENST00000482693 STRN4Q9NRL3 753 aa22.92■■□□□ 1.26
SF1-215ENST00000482693 AXIN2Q9Y2T1 843 aa22.92■■□□□ 1.26
SF1-215ENST00000482693 CAMTA1Q9Y6Y1 1673 aa22.92■■□□□ 1.26
SF1-215ENST00000482693 AMER1Q5JTC6 1135 aaPredicted RBP22.91■■□□□ 1.26
SF1-215ENST00000482693 CCDC9Q9Y3X0 531 aaKnown RBP22.91■■□□□ 1.26
SF1-215ENST00000482693 LMO7Q8WWI1 1683 aa22.9■■□□□ 1.26
SF1-215ENST00000482693 ILDR2Q71H61 639 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms