RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 TRPM3Q9HCF6 1732 aaPredicted RBP27.48■■□□□ 1.99
TRAPPC12-220ENST00000482645 PLEKHG5O94827 1062 aa27.47■■□□□ 1.99
TRAPPC12-220ENST00000482645 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.47■■□□□ 1.99
TRAPPC12-220ENST00000482645 PANK3Q9H999 370 aa27.46■■□□□ 1.99
TRAPPC12-220ENST00000482645 TNS3Q68CZ2 1445 aa27.46■■□□□ 1.99
TRAPPC12-220ENST00000482645 SBNO1A3KN83 1393 aa27.46■■□□□ 1.99
TRAPPC12-220ENST00000482645 SPATA31A3Q5VYP0 1347 aa27.45■■□□□ 1.98
TRAPPC12-220ENST00000482645 NRKQ7Z2Y5 1582 aa27.44■■□□□ 1.98
TRAPPC12-220ENST00000482645 TTC21BQ7Z4L5 1316 aa27.43■■□□□ 1.98
TRAPPC12-220ENST00000482645 NUTM2GQ5VZR2 741 aa27.43■■□□□ 1.98
TRAPPC12-220ENST00000482645 EDC4Q6P2E9 1401 aaKnown RBP27.43■■□□□ 1.98
TRAPPC12-220ENST00000482645 NSD3Q9BZ95 1437 aa27.42■■□□□ 1.98
TRAPPC12-220ENST00000482645 ABTB2Q8N961 1025 aa27.42■■□□□ 1.98
TRAPPC12-220ENST00000482645 CARD14Q9BXL6 1004 aa27.42■■□□□ 1.98
TRAPPC12-220ENST00000482645 SSH2Q76I76 1423 aa27.41■■□□□ 1.98
TRAPPC12-220ENST00000482645 BRD4O60885 1362 aaPredicted RBP27.41■■□□□ 1.98
TRAPPC12-220ENST00000482645 ALS2Q96Q42 1657 aa27.4■■□□□ 1.98
TRAPPC12-220ENST00000482645 JCADQ9P266 1359 aa27.4■■□□□ 1.98
TRAPPC12-220ENST00000482645 ARHGEF10O15013 1369 aa27.39■■□□□ 1.98
TRAPPC12-220ENST00000482645 PNPLA6Q8IY17 1366 aa27.39■■□□□ 1.98
TRAPPC12-220ENST00000482645 TTC21AQ8NDW8 1320 aa27.38■■□□□ 1.97
TRAPPC12-220ENST00000482645 NME9Q86XW9 330 aa27.37■■□□□ 1.97
TRAPPC12-220ENST00000482645 PIK3C2AO00443 1686 aa27.37■■□□□ 1.97
TRAPPC12-220ENST00000482645 SHPRHQ149N8 1683 aa27.36■■□□□ 1.97
TRAPPC12-220ENST00000482645 NLRP6P59044 892 aa27.36■■□□□ 1.97
TRAPPC12-220ENST00000482645 DDX10Q13206 875 aaKnown RBP27.36■■□□□ 1.97
TRAPPC12-220ENST00000482645 CABLES1Q8TDN4 633 aa27.34■■□□□ 1.97
TRAPPC12-220ENST00000482645 ZRANB1Q9UGI0 708 aa27.34■■□□□ 1.97
TRAPPC12-220ENST00000482645 KNSTRNQ9Y448 316 aa27.33■■□□□ 1.97
TRAPPC12-220ENST00000482645 NUTM2BA6NNL0 878 aaPredicted RBP27.32■■□□□ 1.96
TRAPPC12-220ENST00000482645 NUTM2EB1AL46 878 aaPredicted RBP27.32■■□□□ 1.96
TRAPPC12-220ENST00000482645 NUTM2AQ8IVF1 878 aaPredicted RBP27.32■■□□□ 1.96
TRAPPC12-220ENST00000482645 HAP1P54257 671 aaPredicted RBP27.31■■□□□ 1.96
TRAPPC12-220ENST00000482645 KIF20BQ96Q89 1820 aa27.31■■□□□ 1.96
TRAPPC12-220ENST00000482645 NLRP13Q86W25 1043 aa27.31■■□□□ 1.96
TRAPPC12-220ENST00000482645 GGNBP2Q9H3C7 697 aa27.31■■□□□ 1.96
TRAPPC12-220ENST00000482645 CGNL1Q0VF96 1302 aa27.31■■□□□ 1.96
TRAPPC12-220ENST00000482645 COL22A1Q8NFW1 1626 aaPredicted RBP27.3■■□□□ 1.96
TRAPPC12-220ENST00000482645 CNGB1Q14028 1251 aaPredicted RBP27.3■■□□□ 1.96
TRAPPC12-220ENST00000482645 FYB1O15117 783 aa27.28■■□□□ 1.96
TRAPPC12-220ENST00000482645 SOX12O15370 315 aa27.28■■□□□ 1.96
TRAPPC12-220ENST00000482645 MED1Q15648 1581 aaPredicted RBP27.27■■□□□ 1.96
TRAPPC12-220ENST00000482645 SPATA31A6Q5VVP1 1343 aa27.27■■□□□ 1.96
TRAPPC12-220ENST00000482645 COG3Q96JB2 828 aa27.26■■□□□ 1.96
TRAPPC12-220ENST00000482645 ABCA3Q99758 1704 aa27.25■■□□□ 1.95
TRAPPC12-220ENST00000482645 PER1O15534 1290 aaPredicted RBP27.25■■□□□ 1.95
TRAPPC12-220ENST00000482645 MARF1Q9Y4F3 1742 aaKnown RBP27.24■■□□□ 1.95
TRAPPC12-220ENST00000482645 DIEXFQ68CQ4 756 aaKnown RBP27.24■■□□□ 1.95
TRAPPC12-220ENST00000482645 PHRF1Q9P1Y6 1649 aaKnown RBP27.24■■□□□ 1.95
TRAPPC12-220ENST00000482645 USP31Q70CQ4 1352 aa27.23■■□□□ 1.95
TRAPPC12-220ENST00000482645 USP19O94966 1318 aa27.23■■□□□ 1.95
TRAPPC12-220ENST00000482645 ADAMTS2O95450 1211 aa27.23■■□□□ 1.95
TRAPPC12-220ENST00000482645 OVOS2A0A0J9YW53 1432 aa27.23■■□□□ 1.95
TRAPPC12-220ENST00000482645 OVOS2Q6IE36 1432 aa27.23■■□□□ 1.95
TRAPPC12-220ENST00000482645 CRYBG1Q9Y4K1 1723 aa27.23■■□□□ 1.95
TRAPPC12-220ENST00000482645 CC2D1BQ5T0F9 858 aaKnown RBP27.21■■□□□ 1.95
TRAPPC12-220ENST00000482645 AMER1Q5JTC6 1135 aaPredicted RBP27.21■■□□□ 1.95
TRAPPC12-220ENST00000482645 LRP6O75581 1613 aa27.2■■□□□ 1.95
TRAPPC12-220ENST00000482645 GCP02774 474 aa27.2■■□□□ 1.94
TRAPPC12-220ENST00000482645 MEX3CQ5U5Q3 659 aaKnown RBP27.2■■□□□ 1.94
TRAPPC12-220ENST00000482645 USP54Q70EL1 1684 aa27.19■■□□□ 1.94
TRAPPC12-220ENST00000482645 ZBTB7CA1YPR0 619 aa27.19■■□□□ 1.94
TRAPPC12-220ENST00000482645 ZC3H6P61129 1189 aaKnown RBP27.19■■□□□ 1.94
TRAPPC12-220ENST00000482645 SLIT3O75094 1523 aa27.18■■□□□ 1.94
TRAPPC12-220ENST00000482645 NSD2O96028 1365 aa27.17■■□□□ 1.94
TRAPPC12-220ENST00000482645 KCNH5Q8NCM2 988 aa27.17■■□□□ 1.94
TRAPPC12-220ENST00000482645 ANKRD26Q9UPS8 1709 aa27.17■■□□□ 1.94
TRAPPC12-220ENST00000482645 TNNT2P45379 298 aaPredicted RBP27.16■■□□□ 1.94
TRAPPC12-220ENST00000482645 MORC1Q86VD1 984 aa27.16■■□□□ 1.94
TRAPPC12-220ENST00000482645 FBLN1P23142 703 aa27.15■■□□□ 1.94
TRAPPC12-220ENST00000482645 KIAA0232Q92628 1395 aa27.13■■□□□ 1.93
TRAPPC12-220ENST00000482645 C8orf37Q96NL8 207 aa27.13■■□□□ 1.93
TRAPPC12-220ENST00000482645 PRDM11Q9NQV5 511 aa27.12■■□□□ 1.93
TRAPPC12-220ENST00000482645 NFAT5O94916 1531 aa27.12■■□□□ 1.93
TRAPPC12-220ENST00000482645 CHRNA2Q15822 529 aa27.11■■□□□ 1.93
TRAPPC12-220ENST00000482645 NPC1L1Q9UHC9 1359 aa27.09■■□□□ 1.93
TRAPPC12-220ENST00000482645 RRS1Q15050 365 aaKnown RBP27.08■■□□□ 1.93
TRAPPC12-220ENST00000482645 NGLY1Q96IV0 654 aa27.08■■□□□ 1.93
TRAPPC12-220ENST00000482645 LTN1O94822 1766 aa27.07■■□□□ 1.92
TRAPPC12-220ENST00000482645 FAM83GA6ND36 823 aa27.07■■□□□ 1.92
TRAPPC12-220ENST00000482645 CPDO75976 1380 aa27.06■■□□□ 1.92
TRAPPC12-220ENST00000482645 ARHGEF25Q86VW2 580 aa27.06■■□□□ 1.92
TRAPPC12-220ENST00000482645 MAP3K19Q56UN5 1328 aa27.04■■□□□ 1.92
TRAPPC12-220ENST00000482645 PPM1GO15355 546 aaPredicted RBP27.04■■□□□ 1.92
TRAPPC12-220ENST00000482645 COL14A1Q05707 1796 aaKnown RBP27.03■■□□□ 1.92
TRAPPC12-220ENST00000482645 PLCH1Q4KWH8 1693 aa27.02■■□□□ 1.92
TRAPPC12-220ENST00000482645 MAP2P11137 1827 aaKnown RBP27.01■■□□□ 1.92
TRAPPC12-220ENST00000482645 AMPHP49418 695 aa27.01■■□□□ 1.91
TRAPPC12-220ENST00000482645 EMILIN1Q9Y6C2 1016 aa27.01■■□□□ 1.91
TRAPPC12-220ENST00000482645 BTG4Q9NY30 223 aa27■■□□□ 1.91
TRAPPC12-220ENST00000482645 AATKQ6ZMQ8 1374 aa27■■□□□ 1.91
TRAPPC12-220ENST00000482645 AFF2P51816 1311 aa27■■□□□ 1.91
TRAPPC12-220ENST00000482645 PHF23Q9BUL5 403 aaPredicted RBP27■■□□□ 1.91
TRAPPC12-220ENST00000482645 POLKQ9UBT6 870 aa26.98■■□□□ 1.91
TRAPPC12-220ENST00000482645 ANP32CO43423 234 aa26.97■■□□□ 1.91
TRAPPC12-220ENST00000482645 AXIN2Q9Y2T1 843 aa26.97■■□□□ 1.91
TRAPPC12-220ENST00000482645 STRN4Q9NRL3 753 aa26.96■■□□□ 1.91
TRAPPC12-220ENST00000482645 USP21Q9UK80 565 aa26.96■■□□□ 1.91
TRAPPC12-220ENST00000482645 COL18A1P39060 1754 aa26.96■■□□□ 1.91
TRAPPC12-220ENST00000482645 RGPD5Q99666 1765 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms