RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 UNC93B1Q9H1C4 597 aa12.02□□□□□ -0.49
CLK1-212ENST00000482590 MTMR2Q13614 643 aa12.01□□□□□ -0.49
CLK1-212ENST00000482590 BAZ1BQ9UIG0 1483 aaKnown RBP12.01□□□□□ -0.49
CLK1-212ENST00000482590 PEG3Q9GZU2 1588 aa12.01□□□□□ -0.49
CLK1-212ENST00000482590 BCANQ96GW7 911 aa12□□□□□ -0.49
CLK1-212ENST00000482590 KCNH2Q12809 1159 aa11.99□□□□□ -0.49
CLK1-212ENST00000482590 LCE2CQ5TA81 110 aa11.98□□□□□ -0.49
CLK1-212ENST00000482590 DESI1Q6ICB0 168 aa11.98□□□□□ -0.49
CLK1-212ENST00000482590 BAP1Q92560 729 aa11.98□□□□□ -0.49
CLK1-212ENST00000482590 KIFC2Q96AC6 838 aa11.98□□□□□ -0.49
CLK1-212ENST00000482590 TBC1D2Q9BYX2 928 aa11.98□□□□□ -0.49
CLK1-212ENST00000482590 SPDYE5A6NIY4 337 aa11.97□□□□□ -0.49
CLK1-212ENST00000482590 LINC01559Q495D7 138 aa11.97□□□□□ -0.49
CLK1-212ENST00000482590 PARP9Q8IXQ6 854 aa11.97□□□□□ -0.49
CLK1-212ENST00000482590 WASF2Q9Y6W5 498 aa11.97□□□□□ -0.49
CLK1-212ENST00000482590 TERTO14746 1132 aaKnown RBP11.96□□□□□ -0.49
CLK1-212ENST00000482590 GJA5P36382 358 aa11.96□□□□□ -0.49
CLK1-212ENST00000482590 RSBN1LQ6PCB5 846 aaPredicted RBP11.96□□□□□ -0.49
CLK1-212ENST00000482590 PCDHB15Q9Y5E8 787 aa11.95□□□□□ -0.5
CLK1-212ENST00000482590 LAMC3Q9Y6N6 1575 aa11.94□□□□□ -0.5
CLK1-212ENST00000482590 TRIM66O15016 1216 aa11.94□□□□□ -0.5
CLK1-212ENST00000482590 CAPN5O15484 640 aaPredicted RBP11.94□□□□□ -0.5
CLK1-212ENST00000482590 WIPF1O43516 503 aa11.94□□□□□ -0.5
CLK1-212ENST00000482590 BMP1P13497 986 aa11.94□□□□□ -0.5
CLK1-212ENST00000482590 TRIM46Q7Z4K8 759 aa11.94□□□□□ -0.5
CLK1-212ENST00000482590 ZNF511Q8NB15 262 aa11.94□□□□□ -0.5
CLK1-212ENST00000482590 TLL2Q9Y6L7 1015 aa11.94□□□□□ -0.5
CLK1-212ENST00000482590 KIF21AQ7Z4S6 1674 aa11.94□□□□□ -0.5
CLK1-212ENST00000482590 NESP48681 1621 aa11.93□□□□□ -0.5
CLK1-212ENST00000482590 THOC2Q8NI27 1593 aaKnown RBP11.93□□□□□ -0.5
CLK1-212ENST00000482590 DIXDC1Q155Q3 683 aa11.92□□□□□ -0.5
CLK1-212ENST00000482590 MROH2BQ7Z745 1585 aa11.92□□□□□ -0.5
CLK1-212ENST00000482590 CFAP99D6REC4 459 aa11.91□□□□□ -0.5
CLK1-212ENST00000482590 SPTLC1O15269 473 aa11.91□□□□□ -0.5
CLK1-212ENST00000482590 LYPD8Q6UX82 237 aa11.91□□□□□ -0.5
CLK1-212ENST00000482590 VARSP26640 1264 aaKnown RBP11.9□□□□□ -0.5
CLK1-212ENST00000482590 HRCP23327 699 aa11.89□□□□□ -0.51
CLK1-212ENST00000482590 CTHP32929 405 aa11.88□□□□□ -0.51
CLK1-212ENST00000482590 MPNDQ8N594 471 aa11.88□□□□□ -0.51
CLK1-212ENST00000482590 AK7Q96M32 723 aa11.88□□□□□ -0.51
CLK1-212ENST00000482590 RIC3Q7Z5B4 369 aa11.87□□□□□ -0.51
CLK1-212ENST00000482590 ARXQ96QS3 562 aa11.87□□□□□ -0.51
CLK1-212ENST00000482590 ZBTB3Q9H5J0 574 aa11.87□□□□□ -0.51
CLK1-212ENST00000482590 PLEKHG3A1L390 1219 aa11.86□□□□□ -0.51
CLK1-212ENST00000482590 CABLES1Q8TDN4 633 aa11.86□□□□□ -0.51
CLK1-212ENST00000482590 MAP10Q9P2G4 905 aa11.86□□□□□ -0.51
CLK1-212ENST00000482590 F12P00748 615 aaPredicted RBP11.85□□□□□ -0.51
CLK1-212ENST00000482590 NNTQ13423 1086 aa11.85□□□□□ -0.51
CLK1-212ENST00000482590 PRPF38BQ5VTL8 546 aaKnown RBP11.85□□□□□ -0.51
CLK1-212ENST00000482590 WIZO95785 1651 aa11.84□□□□□ -0.51
CLK1-212ENST00000482590 INSM1Q01101 510 aaPredicted RBP11.84□□□□□ -0.51
CLK1-212ENST00000482590 CSPP1Q1MSJ5 1256 aa11.83□□□□□ -0.52
CLK1-212ENST00000482590 FOXJ1Q92949 421 aa11.83□□□□□ -0.52
CLK1-212ENST00000482590 NXF1Q9UBU9 619 aaKnown RBP11.83□□□□□ -0.52
CLK1-212ENST00000482590 STK17AQ9UEE5 414 aa11.83□□□□□ -0.52
CLK1-212ENST00000482590 ZFP42Q96MM3 310 aa11.82□□□□□ -0.52
CLK1-212ENST00000482590 PER1O15534 1290 aaPredicted RBP11.81□□□□□ -0.52
CLK1-212ENST00000482590 TIMP2P16035 220 aa11.81□□□□□ -0.52
CLK1-212ENST00000482590 FAM174AQ8TBP5 190 aa11.81□□□□□ -0.52
CLK1-212ENST00000482590 LIMD1Q9UGP4 676 aa11.81□□□□□ -0.52
CLK1-212ENST00000482590 SLC16A10Q8TF71 515 aa11.8□□□□□ -0.52
CLK1-212ENST00000482590 KLF16Q9BXK1 252 aaPredicted RBP11.8□□□□□ -0.52
CLK1-212ENST00000482590 PDS5BQ9NTI5 1447 aa11.79□□□□□ -0.52
CLK1-212ENST00000482590 ADH1CP00326 375 aa11.79□□□□□ -0.52
CLK1-212ENST00000482590 WDR4P57081 412 aaKnown RBP11.79□□□□□ -0.52
CLK1-212ENST00000482590 PDE4DQ08499 809 aa11.79□□□□□ -0.52
CLK1-212ENST00000482590 QPCTQ16769 361 aa11.79□□□□□ -0.52
CLK1-212ENST00000482590 MYSM1Q5VVJ2 828 aa11.79□□□□□ -0.52
CLK1-212ENST00000482590 CDK15Q96Q40 435 aa11.79□□□□□ -0.52
CLK1-212ENST00000482590 C4orf48Q5BLP8 95 aa11.78□□□□□ -0.52
CLK1-212ENST00000482590 MRPL14Q6P1L8 145 aaKnown RBP11.78□□□□□ -0.52
CLK1-212ENST00000482590 VEGFBP49765 207 aa11.77□□□□□ -0.53
CLK1-212ENST00000482590 NPAS3Q8IXF0 933 aa11.77□□□□□ -0.53
CLK1-212ENST00000482590 ARID5BQ14865 1188 aa11.76□□□□□ -0.53
CLK1-212ENST00000482590 PRDM2Q13029 1718 aa11.75□□□□□ -0.53
CLK1-212ENST00000482590 LILRB3O75022 631 aa11.75□□□□□ -0.53
CLK1-212ENST00000482590 TUSC1Q2TAM9 212 aa11.75□□□□□ -0.53
CLK1-212ENST00000482590 TSC1Q92574 1164 aa11.75□□□□□ -0.53
CLK1-212ENST00000482590 PURBQ96QR8 312 aaKnown RBP11.75□□□□□ -0.53
CLK1-212ENST00000482590 NUTM2BA6NNL0 878 aaPredicted RBP11.74□□□□□ -0.53
CLK1-212ENST00000482590 NUTM2EB1AL46 878 aaPredicted RBP11.74□□□□□ -0.53
CLK1-212ENST00000482590 H3BM21 787 aa11.74□□□□□ -0.53
CLK1-212ENST00000482590 GMPRP36959 345 aa11.74□□□□□ -0.53
CLK1-212ENST00000482590 NUTM2DQ5VT03 806 aaPredicted RBP11.74□□□□□ -0.53
CLK1-212ENST00000482590 NUTM2AQ8IVF1 878 aaPredicted RBP11.74□□□□□ -0.53
CLK1-212ENST00000482590 NR3C2P08235 984 aa11.73□□□□□ -0.53
CLK1-212ENST00000482590 SCARF1Q14162 830 aa11.73□□□□□ -0.53
CLK1-212ENST00000482590 AGERQ15109 404 aa11.73□□□□□ -0.53
CLK1-212ENST00000482590 IRF7Q92985 503 aa11.73□□□□□ -0.53
CLK1-212ENST00000482590 SLC24A3Q9HC58 644 aa11.73□□□□□ -0.53
CLK1-212ENST00000482590 MRC2Q9UBG0 1479 aa11.72□□□□□ -0.53
CLK1-212ENST00000482590 GRM5P41594 1212 aa11.72□□□□□ -0.53
CLK1-212ENST00000482590 TPRNQ4KMQ1 711 aa11.72□□□□□ -0.53
CLK1-212ENST00000482590 BPHLQ86WA6 291 aaPredicted RBP11.72□□□□□ -0.53
CLK1-212ENST00000482590 ZFAND3Q9H8U3 227 aa11.72□□□□□ -0.53
CLK1-212ENST00000482590 WDR62O43379 1518 aa11.71□□□□□ -0.53
CLK1-212ENST00000482590 CADPSQ9ULU8 1353 aa11.71□□□□□ -0.53
CLK1-212ENST00000482590 ERBB4Q15303 1308 aa11.71□□□□□ -0.53
CLK1-212ENST00000482590 ZIC2O95409 532 aaPredicted RBP11.71□□□□□ -0.53
CLK1-212ENST00000482590 NR5A1Q13285 461 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms