RNA–Protein interactions for RNA: ENST00000482128.1

SEMA4D-218, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-218ENST00000482128 PAK3O75914 559 aaPredicted RBP26.66■■□□□ 1.86
SEMA4D-218ENST00000482128 XPCQ01831 940 aaPredicted RBP26.66■■□□□ 1.86
SEMA4D-218ENST00000482128 DDX17Q92841 729 aaKnown RBP26.66■■□□□ 1.86
SEMA4D-218ENST00000482128 SBNO1A3KN83 1393 aa26.66■■□□□ 1.86
SEMA4D-218ENST00000482128 PXDNQ92626 1479 aa26.66■■□□□ 1.86
SEMA4D-218ENST00000482128 NRKQ7Z2Y5 1582 aa26.66■■□□□ 1.86
SEMA4D-218ENST00000482128 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.65■■□□□ 1.86
SEMA4D-218ENST00000482128 SOS2Q07890 1332 aaPredicted RBP26.65■■□□□ 1.86
SEMA4D-218ENST00000482128 NSD2O96028 1365 aa26.62■■□□□ 1.85
SEMA4D-218ENST00000482128 NPC1L1Q9UHC9 1359 aa26.61■■□□□ 1.85
SEMA4D-218ENST00000482128 TNS3Q68CZ2 1445 aa26.6■■□□□ 1.85
SEMA4D-218ENST00000482128 AMER1Q5JTC6 1135 aaPredicted RBP26.6■■□□□ 1.85
SEMA4D-218ENST00000482128 TRPM3Q9HCF6 1732 aaPredicted RBP26.59■■□□□ 1.85
SEMA4D-218ENST00000482128 ARHGEF10O15013 1369 aa26.58■■□□□ 1.85
SEMA4D-218ENST00000482128 ABTB2Q8N961 1025 aa26.58■■□□□ 1.85
SEMA4D-218ENST00000482128 SPATA31A3Q5VYP0 1347 aa26.58■■□□□ 1.85
SEMA4D-218ENST00000482128 FYB1O15117 783 aa26.57■■□□□ 1.84
SEMA4D-218ENST00000482128 NME9Q86XW9 330 aa26.57■■□□□ 1.84
SEMA4D-218ENST00000482128 LRRC59Q96AG4 307 aaKnown RBP26.57■■□□□ 1.84
SEMA4D-218ENST00000482128 PHLPP1O60346 1717 aa26.56■■□□□ 1.84
SEMA4D-218ENST00000482128 DIEXFQ68CQ4 756 aaKnown RBP26.56■■□□□ 1.84
SEMA4D-218ENST00000482128 LMOD2Q6P5Q4 547 aa26.56■■□□□ 1.84
SEMA4D-218ENST00000482128 COG3Q96JB2 828 aa26.55■■□□□ 1.84
SEMA4D-218ENST00000482128 KIF20BQ96Q89 1820 aa26.55■■□□□ 1.84
SEMA4D-218ENST00000482128 CC2D1BQ5T0F9 858 aaKnown RBP26.54■■□□□ 1.84
SEMA4D-218ENST00000482128 GGNBP2Q9H3C7 697 aa26.54■■□□□ 1.84
SEMA4D-218ENST00000482128 USP31Q70CQ4 1352 aa26.54■■□□□ 1.84
SEMA4D-218ENST00000482128 NLRP6P59044 892 aa26.53■■□□□ 1.84
SEMA4D-218ENST00000482128 NLRP13Q86W25 1043 aa26.53■■□□□ 1.84
SEMA4D-218ENST00000482128 PIK3C2AO00443 1686 aa26.53■■□□□ 1.84
SEMA4D-218ENST00000482128 COL16A1Q07092 1604 aaPredicted RBP26.52■■□□□ 1.84
SEMA4D-218ENST00000482128 ALS2Q96Q42 1657 aa26.52■■□□□ 1.84
SEMA4D-218ENST00000482128 OVOS2A0A0J9YW53 1432 aa26.5■■□□□ 1.83
SEMA4D-218ENST00000482128 OVOS2Q6IE36 1432 aa26.5■■□□□ 1.83
SEMA4D-218ENST00000482128 ANP32CO43423 234 aa26.5■■□□□ 1.83
SEMA4D-218ENST00000482128 CNGB1Q14028 1251 aaPredicted RBP26.5■■□□□ 1.83
SEMA4D-218ENST00000482128 MORC1Q86VD1 984 aa26.5■■□□□ 1.83
SEMA4D-218ENST00000482128 NUTM2GQ5VZR2 741 aa26.49■■□□□ 1.83
SEMA4D-218ENST00000482128 FBXO41Q8TF61 875 aa26.48■■□□□ 1.83
SEMA4D-218ENST00000482128 RALBP1Q15311 655 aa26.47■■□□□ 1.83
SEMA4D-218ENST00000482128 ZRANB1Q9UGI0 708 aa26.47■■□□□ 1.83
SEMA4D-218ENST00000482128 ANKRD26Q9UPS8 1709 aa26.47■■□□□ 1.83
SEMA4D-218ENST00000482128 USP54Q70EL1 1684 aa26.47■■□□□ 1.83
SEMA4D-218ENST00000482128 MED1Q15648 1581 aaPredicted RBP26.46■■□□□ 1.83
SEMA4D-218ENST00000482128 HSPA1LP34931 641 aa26.45■■□□□ 1.82
SEMA4D-218ENST00000482128 PARD3Q8TEW0 1356 aa26.45■■□□□ 1.82
SEMA4D-218ENST00000482128 USP19O94966 1318 aa26.44■■□□□ 1.82
SEMA4D-218ENST00000482128 KCNH5Q8NCM2 988 aa26.44■■□□□ 1.82
SEMA4D-218ENST00000482128 PNPLA6Q8IY17 1366 aa26.44■■□□□ 1.82
SEMA4D-218ENST00000482128 JCADQ9P266 1359 aa26.43■■□□□ 1.82
SEMA4D-218ENST00000482128 PRKRIP1Q9H875 184 aaPredicted RBP26.42■■□□□ 1.82
SEMA4D-218ENST00000482128 SLIT3O75094 1523 aa26.41■■□□□ 1.82
SEMA4D-218ENST00000482128 HAP1P54257 671 aaPredicted RBP26.4■■□□□ 1.82
SEMA4D-218ENST00000482128 COL22A1Q8NFW1 1626 aaPredicted RBP26.39■■□□□ 1.82
SEMA4D-218ENST00000482128 PLEKHG5O94827 1062 aa26.39■■□□□ 1.82
SEMA4D-218ENST00000482128 TNNT2P45379 298 aaPredicted RBP26.39■■□□□ 1.82
SEMA4D-218ENST00000482128 AATKQ6ZMQ8 1374 aa26.38■■□□□ 1.81
SEMA4D-218ENST00000482128 MARF1Q9Y4F3 1742 aaKnown RBP26.37■■□□□ 1.81
SEMA4D-218ENST00000482128 GCP02774 474 aa26.37■■□□□ 1.81
SEMA4D-218ENST00000482128 SHPRHQ149N8 1683 aa26.36■■□□□ 1.81
SEMA4D-218ENST00000482128 SOX12O15370 315 aa26.36■■□□□ 1.81
SEMA4D-218ENST00000482128 MYBBP1AQ9BQG0 1328 aaKnown RBP26.36■■□□□ 1.81
SEMA4D-218ENST00000482128 CABLES1Q8TDN4 633 aa26.35■■□□□ 1.81
SEMA4D-218ENST00000482128 PHRF1Q9P1Y6 1649 aaKnown RBP26.35■■□□□ 1.81
SEMA4D-218ENST00000482128 CRYBG1Q9Y4K1 1723 aa26.33■■□□□ 1.81
SEMA4D-218ENST00000482128 NFAT5O94916 1531 aa26.33■■□□□ 1.81
SEMA4D-218ENST00000482128 PPP2R1AP30153 589 aa26.32■■□□□ 1.8
SEMA4D-218ENST00000482128 SPATA31A6Q5VVP1 1343 aa26.32■■□□□ 1.8
SEMA4D-218ENST00000482128 ABCA3Q99758 1704 aa26.3■■□□□ 1.8
SEMA4D-218ENST00000482128 RRS1Q15050 365 aaKnown RBP26.29■■□□□ 1.8
SEMA4D-218ENST00000482128 CPDO75976 1380 aa26.29■■□□□ 1.8
SEMA4D-218ENST00000482128 POLKQ9UBT6 870 aa26.28■■□□□ 1.8
SEMA4D-218ENST00000482128 MAP3K19Q56UN5 1328 aa26.28■■□□□ 1.8
SEMA4D-218ENST00000482128 KIF24Q5T7B8 1368 aa26.28■■□□□ 1.8
SEMA4D-218ENST00000482128 SMG6Q86US8 1419 aaKnown RBP26.28■■□□□ 1.8
SEMA4D-218ENST00000482128 FBLN1P23142 703 aa26.27■■□□□ 1.8
SEMA4D-218ENST00000482128 ZC3H6P61129 1189 aaKnown RBP26.27■■□□□ 1.8
SEMA4D-218ENST00000482128 RTL1A6NKG5 1358 aa26.26■■□□□ 1.79
SEMA4D-218ENST00000482128 AMPHP49418 695 aa26.26■■□□□ 1.79
SEMA4D-218ENST00000482128 ARHGEF25Q86VW2 580 aa26.26■■□□□ 1.79
SEMA4D-218ENST00000482128 KIAA0232Q92628 1395 aa26.25■■□□□ 1.79
SEMA4D-218ENST00000482128 ZBTB7CA1YPR0 619 aa26.25■■□□□ 1.79
SEMA4D-218ENST00000482128 NUTM2BA6NNL0 878 aaPredicted RBP26.25■■□□□ 1.79
SEMA4D-218ENST00000482128 NUTM2EB1AL46 878 aaPredicted RBP26.25■■□□□ 1.79
SEMA4D-218ENST00000482128 PPM1GO15355 546 aaPredicted RBP26.25■■□□□ 1.79
SEMA4D-218ENST00000482128 MTHFSP49914 203 aa26.25■■□□□ 1.79
SEMA4D-218ENST00000482128 NUTM2AQ8IVF1 878 aaPredicted RBP26.25■■□□□ 1.79
SEMA4D-218ENST00000482128 PRDM11Q9NQV5 511 aa26.25■■□□□ 1.79
SEMA4D-218ENST00000482128 EMILIN1Q9Y6C2 1016 aa26.25■■□□□ 1.79
SEMA4D-218ENST00000482128 CFAP53Q96M91 514 aa26.24■■□□□ 1.79
SEMA4D-218ENST00000482128 FLT4P35916 1363 aa26.23■■□□□ 1.79
SEMA4D-218ENST00000482128 CDK12Q9NYV4 1490 aaPredicted RBP26.23■■□□□ 1.79
SEMA4D-218ENST00000482128 MIER1Q8N108 512 aa26.22■■□□□ 1.79
SEMA4D-218ENST00000482128 ABCC6O95255 1503 aa26.22■■□□□ 1.79
SEMA4D-218ENST00000482128 IP6K1Q92551 441 aa26.2■■□□□ 1.78
SEMA4D-218ENST00000482128 MAP2P11137 1827 aaKnown RBP26.19■■□□□ 1.78
SEMA4D-218ENST00000482128 ADAMTS2O95450 1211 aa26.19■■□□□ 1.78
SEMA4D-218ENST00000482128 HOXC9P31274 260 aa26.19■■□□□ 1.78
SEMA4D-218ENST00000482128 LTN1O94822 1766 aa26.19■■□□□ 1.78
SEMA4D-218ENST00000482128 CCER2I3L3R5 266 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms