RNA–Protein interactions for RNA: ENST00000482042.1

CTNNB1-213, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 1,366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-213ENST00000482042 LOC105371045A0A1W2PR82 267 aa10.64□□□□□ -0.71
CTNNB1-213ENST00000482042 PCF11O94913 1555 aaKnown RBP10.63□□□□□ -0.71
CTNNB1-213ENST00000482042 PLB1Q6P1J6 1458 aa10.63□□□□□ -0.71
CTNNB1-213ENST00000482042 FMNL1O95466 1100 aaPredicted RBP10.63□□□□□ -0.71
CTNNB1-213ENST00000482042 FYCO1Q9BQS8 1478 aa10.62□□□□□ -0.71
CTNNB1-213ENST00000482042 TTBK1Q5TCY1 1321 aaPredicted RBP10.62□□□□□ -0.71
CTNNB1-213ENST00000482042 TTLL12Q14166 644 aaPredicted RBP10.62□□□□□ -0.71
CTNNB1-213ENST00000482042 BRICD5Q6PL45 260 aa10.62□□□□□ -0.71
CTNNB1-213ENST00000482042 CCDC18Q5T9S5 1454 aa10.61□□□□□ -0.71
CTNNB1-213ENST00000482042 HOXA2O43364 376 aa10.61□□□□□ -0.71
CTNNB1-213ENST00000482042 BCANQ96GW7 911 aa10.61□□□□□ -0.71
CTNNB1-213ENST00000482042 AK7Q96M32 723 aa10.61□□□□□ -0.71
CTNNB1-213ENST00000482042 CFAP43Q8NDM7 1665 aa10.6□□□□□ -0.71
CTNNB1-213ENST00000482042 PPEF1O14829 653 aaPredicted RBP10.6□□□□□ -0.71
CTNNB1-213ENST00000482042 TRIM66O15016 1216 aa10.6□□□□□ -0.71
CTNNB1-213ENST00000482042 SSTR3P32745 418 aaPredicted RBP10.6□□□□□ -0.71
CTNNB1-213ENST00000482042 Q3C1V9 767 aa10.6□□□□□ -0.71
CTNNB1-213ENST00000482042 RNF19BQ6ZMZ0 732 aa10.6□□□□□ -0.71
CTNNB1-213ENST00000482042 EMID1Q96A84 441 aaPredicted RBP10.6□□□□□ -0.71
CTNNB1-213ENST00000482042 CASKIN1Q8WXD9 1431 aa10.59□□□□□ -0.71
CTNNB1-213ENST00000482042 MSS51Q4VC12 460 aa10.59□□□□□ -0.71
CTNNB1-213ENST00000482042 GIGYF2Q6Y7W6 1299 aaKnown RBP10.59□□□□□ -0.71
CTNNB1-213ENST00000482042 FAM160A2Q8N612 972 aaPredicted RBP10.59□□□□□ -0.71
CTNNB1-213ENST00000482042 NUP153P49790 1475 aaKnown RBP10.58□□□□□ -0.72
CTNNB1-213ENST00000482042 PARP9Q8IXQ6 854 aa10.57□□□□□ -0.72
CTNNB1-213ENST00000482042 HLA-CQ95604 372 aa10.57□□□□□ -0.72
CTNNB1-213ENST00000482042 EPRSP07814 1512 aaKnown RBP10.57□□□□□ -0.72
CTNNB1-213ENST00000482042 SLC19A1P41440 591 aa10.56□□□□□ -0.72
CTNNB1-213ENST00000482042 LAPTM4AQ15012 233 aa10.56□□□□□ -0.72
CTNNB1-213ENST00000482042 VPS8Q8N3P4 1428 aa10.56□□□□□ -0.72
CTNNB1-213ENST00000482042 DIP2BQ9P265 1576 aa10.56□□□□□ -0.72
CTNNB1-213ENST00000482042 ATP10BO94823 1461 aa10.56□□□□□ -0.72
CTNNB1-213ENST00000482042 GLI2P10070 1586 aa10.55□□□□□ -0.72
CTNNB1-213ENST00000482042 PLA2G2CQ5R387 149 aa10.55□□□□□ -0.72
CTNNB1-213ENST00000482042 NUTM1Q86Y26 1132 aa10.55□□□□□ -0.72
CTNNB1-213ENST00000482042 PRDM9Q9NQV7 894 aa10.55□□□□□ -0.72
CTNNB1-213ENST00000482042 TSPOAP1O95153 1857 aa10.55□□□□□ -0.72
CTNNB1-213ENST00000482042 CDK11AQ9UQ88 783 aaPredicted RBP10.54□□□□□ -0.72
CTNNB1-213ENST00000482042 MYO5CQ9NQX4 1742 aa10.54□□□□□ -0.72
CTNNB1-213ENST00000482042 WDR7Q9Y4E6 1490 aa10.54□□□□□ -0.72
CTNNB1-213ENST00000482042 SPRYD7Q5W111 196 aa10.53□□□□□ -0.72
CTNNB1-213ENST00000482042 LIAT1Q6ZQX7 453 aa10.53□□□□□ -0.72
CTNNB1-213ENST00000482042 SLC24A3Q9HC58 644 aa10.53□□□□□ -0.72
CTNNB1-213ENST00000482042 ASXL2Q76L83 1435 aa10.53□□□□□ -0.72
CTNNB1-213ENST00000482042 MAP3K1Q13233 1512 aa10.53□□□□□ -0.72
CTNNB1-213ENST00000482042 KIF14Q15058 1648 aa10.53□□□□□ -0.72
CTNNB1-213ENST00000482042 ABCA9Q8IUA7 1624 aa10.53□□□□□ -0.72
CTNNB1-213ENST00000482042 MAP3K4Q9Y6R4 1608 aa10.53□□□□□ -0.72
CTNNB1-213ENST00000482042 GUCA2AQ02747 115 aa10.52□□□□□ -0.72
CTNNB1-213ENST00000482042 SPIRE2Q8WWL2 714 aa10.52□□□□□ -0.72
CTNNB1-213ENST00000482042 USB1Q9BQ65 265 aaKnown RBP10.52□□□□□ -0.72
CTNNB1-213ENST00000482042 ATP1B4Q9UN42 357 aaPredicted RBP10.52□□□□□ -0.72
CTNNB1-213ENST00000482042 FCF1Q9Y324 198 aaKnown RBP10.52□□□□□ -0.72
CTNNB1-213ENST00000482042 ABCC10Q5T3U5 1492 aa10.52□□□□□ -0.72
CTNNB1-213ENST00000482042 CDK13Q14004 1512 aaKnown RBP10.52□□□□□ -0.73
CTNNB1-213ENST00000482042 TIAM1Q13009 1591 aa10.52□□□□□ -0.73
CTNNB1-213ENST00000482042 MMP16P51512 607 aa10.52□□□□□ -0.73
CTNNB1-213ENST00000482042 SUPT6HQ7KZ85 1726 aaKnown RBP10.51□□□□□ -0.73
CTNNB1-213ENST00000482042 ITSN2Q9NZM3 1697 aa10.51□□□□□ -0.73
CTNNB1-213ENST00000482042 CFAP74Q9C0B2 1584 aa10.51□□□□□ -0.73
CTNNB1-213ENST00000482042 GFRA3O60609 400 aa10.51□□□□□ -0.73
CTNNB1-213ENST00000482042 PDE4DQ08499 809 aa10.51□□□□□ -0.73
CTNNB1-213ENST00000482042 ZNF598Q86UK7 904 aaKnown RBP10.51□□□□□ -0.73
CTNNB1-213ENST00000482042 BEGAINQ9BUH8 593 aa10.51□□□□□ -0.73
CTNNB1-213ENST00000482042 EHBP1L1Q8N3D4 1523 aa10.5□□□□□ -0.73
CTNNB1-213ENST00000482042 PLEKHD1A6NEE1 506 aa10.5□□□□□ -0.73
CTNNB1-213ENST00000482042 NRG2O14511 850 aaPredicted RBP10.5□□□□□ -0.73
CTNNB1-213ENST00000482042 MS4A1P11836 297 aa10.5□□□□□ -0.73
CTNNB1-213ENST00000482042 DXOO77932 396 aaKnown RBP10.49□□□□□ -0.73
CTNNB1-213ENST00000482042 FDX1P10109 184 aa10.49□□□□□ -0.73
CTNNB1-213ENST00000482042 CDC42BPAQ5VT25 1732 aa10.48□□□□□ -0.73
CTNNB1-213ENST00000482042 RPIAP49247 311 aa10.48□□□□□ -0.73
CTNNB1-213ENST00000482042 Q6ZNB5 142 aa10.48□□□□□ -0.73
CTNNB1-213ENST00000482042 TRIM67Q6ZTA4 783 aa10.48□□□□□ -0.73
CTNNB1-213ENST00000482042 PCDHGC3Q9UN70 934 aa10.48□□□□□ -0.73
CTNNB1-213ENST00000482042 PDZRN3Q9UPQ7 1066 aa10.48□□□□□ -0.73
CTNNB1-213ENST00000482042 TROQ12816 1431 aaPredicted RBP10.47□□□□□ -0.73
CTNNB1-213ENST00000482042 MOXD2PA6NHM9 499 aa10.47□□□□□ -0.73
CTNNB1-213ENST00000482042 ZNF697Q5TEC3 545 aa10.47□□□□□ -0.73
CTNNB1-213ENST00000482042 PPRC1Q5VV67 1664 aaKnown RBP10.47□□□□□ -0.73
CTNNB1-213ENST00000482042 PRR20EP86478 221 aa10.46□□□□□ -0.74
CTNNB1-213ENST00000482042 PRR20CP86479 221 aa10.46□□□□□ -0.74
CTNNB1-213ENST00000482042 PRR20DP86480 221 aa10.46□□□□□ -0.74
CTNNB1-213ENST00000482042 PRR20BP86481 221 aa10.46□□□□□ -0.74
CTNNB1-213ENST00000482042 PRR20AP86496 221 aa10.46□□□□□ -0.74
CTNNB1-213ENST00000482042 DIXDC1Q155Q3 683 aa10.46□□□□□ -0.74
CTNNB1-213ENST00000482042 RETREG3Q86VR2 466 aa10.46□□□□□ -0.74
CTNNB1-213ENST00000482042 CDC42BPBQ9Y5S2 1711 aa10.46□□□□□ -0.74
CTNNB1-213ENST00000482042 PREX2Q70Z35 1606 aa10.45□□□□□ -0.74
CTNNB1-213ENST00000482042 TEX14Q8IWB6 1497 aa10.45□□□□□ -0.74
CTNNB1-213ENST00000482042 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.45□□□□□ -0.74
CTNNB1-213ENST00000482042 GJA5P36382 358 aa10.45□□□□□ -0.74
CTNNB1-213ENST00000482042 SYMPKQ92797 1274 aaKnown RBP10.45□□□□□ -0.74
CTNNB1-213ENST00000482042 TBC1D2Q9BYX2 928 aa10.45□□□□□ -0.74
CTNNB1-213ENST00000482042 ARAP3Q8WWN8 1544 aa10.44□□□□□ -0.74
CTNNB1-213ENST00000482042 NDUFV2P19404 249 aa10.44□□□□□ -0.74
CTNNB1-213ENST00000482042 MTUS2Q5JR59 1369 aa10.44□□□□□ -0.74
CTNNB1-213ENST00000482042 TTC37Q6PGP7 1564 aa10.43□□□□□ -0.74
CTNNB1-213ENST00000482042 ARID3CA6NKF2 412 aa10.43□□□□□ -0.74
CTNNB1-213ENST00000482042 JUNDP17535 347 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms